 Claudio Atzori
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e725c88ebb
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[raw_all] patching relation identifier phase to be run at the end, i.e. includes also claimed relations
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2021-07-29 13:03:43 +02:00 |
|
Claudio Atzori
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d267dce520
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[raw_all] added extra workflow step for patching the identifiers in the relations, given an id mapping dataset
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2021-07-27 17:18:29 +02:00 |
 Sandro La Bruzzo
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09fccf8000
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added workflow to serialize scholix and summary in json
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2021-07-09 11:01:42 +02:00 |
|
Sandro La Bruzzo
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cd17e19044
|
implemented branch workflow to import datacite and crossref in scholexplorer
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2021-07-08 21:20:19 +02:00 |
|
Sandro La Bruzzo
|
8a034e46e1
|
updated baseline workflow
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2021-07-08 11:11:41 +02:00 |
|
Sandro La Bruzzo
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8535506c22
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added scholix generation
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2021-07-06 17:18:06 +02:00 |
|
Sandro La Bruzzo
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c6fa8598e1
|
massive code refactor:
removed modules dhp-*-scholexplorer
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2021-07-01 22:13:45 +02:00 |
|
Sandro La Bruzzo
|
84b834c893
|
added test dataset test for pangaea
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2021-06-30 17:31:09 +02:00 |
|
Sandro La Bruzzo
|
1a6b398968
|
implemented Creation of Raw Graph and Resolution
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2021-06-30 17:27:55 +02:00 |
|
Sandro La Bruzzo
|
623a0c4edb
|
code Refactor, renaming packages
|
2021-06-30 11:09:30 +02:00 |
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Sandro La Bruzzo
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f36f92287d
|
implemented mapping from Crossref Event Data to Oaf
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2021-06-29 10:21:23 +02:00 |
|
Sandro La Bruzzo
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511ec14c63
|
implemented mapping from EBI and Scholix Resolved to OAF
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2021-06-28 22:04:22 +02:00 |
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Sandro La Bruzzo
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ad50415167
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Merge remote-tracking branch 'origin/stable_ids' into stable_id_scholexplorer
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2021-06-24 17:20:50 +02:00 |
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Sandro La Bruzzo
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80e15cc455
|
implemented mapping from uniprot, pdb and ebi links
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2021-06-24 17:20:00 +02:00 |
|
Claudio Atzori
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50fc5a64a0
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[raw_all] Aggregator graph creation merges claims (updates) with the corresponding entity
|
2021-06-23 11:49:42 +02:00 |
|
Sandro La Bruzzo
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cc0f2b11fb
|
Implemented mapping from pubmed baseline to OAF
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2021-06-16 14:56:24 +02:00 |
|
Claudio Atzori
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2039bb9f5f
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orcid / orcid_pending cleaning backported from master branch
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2021-06-14 09:40:50 +02:00 |
|
Claudio Atzori
|
dd19c4ac5a
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Merge pull request 'import_new_mdstores' (#112) from import_new_mdstores into stable_ids
Reviewed-on: #112
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2021-06-14 09:23:55 +02:00 |
|
Sandro La Bruzzo
|
e57294ac99
|
implemented changes on PUBMed dataflow
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2021-06-03 10:52:09 +02:00 |
 Michele Artini
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e950750262
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add nodes to import hdfs mdstores
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2021-06-01 10:48:50 +02:00 |
|
Michele Artini
|
e9f2b6037c
|
patch of mdstore records
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2021-05-31 11:36:26 +02:00 |
|
Michele Artini
|
ad56a44fda
|
save as gzipped sequence file
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2021-05-28 14:45:39 +02:00 |
|
Michele Artini
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4fa5671d16
|
first implementation of Hdfs Mdstores Importer
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2021-05-27 16:22:07 +02:00 |
|
Sandro La Bruzzo
|
714b71bd21
|
updated pubmed
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2021-05-04 14:54:12 +02:00 |
 Alessia Bardi
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9a20057615
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fixed query for organisations' pids
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2021-04-29 15:23:39 +02:00 |
|
Sandro La Bruzzo
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7f8848ecdd
|
added first implementation of Pangaea Mapping
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2021-04-27 11:30:37 +02:00 |
miconis
|
0393cdce42
|
addition of alternative names in export queries
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2021-04-20 12:45:21 +02:00 |
|
miconis
|
cadd0a5de8
|
modification of the queries for openorgs: they now consider also pending orgs
|
2021-04-20 12:06:56 +02:00 |
|
miconis
|
11b22b2d23
|
bug fix in the query, it now exports only relations with non-hidden organizations
|
2021-04-08 11:51:47 +02:00 |
|
miconis
|
0857100fb8
|
implementation of the tests for the openorgs integration in the openaire provision
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2021-04-07 18:42:16 +02:00 |
|
miconis
|
bf685d849f
|
addition of pids in the query for the export of openorgs for the provision, addition of ec_fields in the openorgs model
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2021-04-07 14:27:43 +02:00 |
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miconis
|
eaaefb8b4c
|
implementation of the procedure to reuse content of different dbs when creating the raw graph
|
2021-04-06 14:35:51 +02:00 |
|
miconis
|
c39c82dfe9
|
modification of the jobs for the integration of openorgs in the provision, dedup records are no more created by merging but simply taking results of openorgs portal
|
2021-04-06 14:31:00 +02:00 |
|
Claudio Atzori
|
9237d55d7f
|
[OpenOrgsWf] cleanup
|
2021-03-29 17:40:34 +02:00 |
|
Claudio Atzori
|
7f4e9479ec
|
[OpenOrgsWf] graph construction wf: allow to skip the import openorgs node (importOpenorgs true|false)
|
2021-03-29 16:59:16 +02:00 |
|
miconis
|
f446580e9f
|
code refactoring (useless classes and wf removed), implementation of the test for the openorgs dedup
|
2021-03-29 16:10:46 +02:00 |
|
miconis
|
2355cc4e9b
|
minor changes and bug fix
|
2021-03-29 10:07:12 +02:00 |
|
miconis
|
28c1cdd132
|
merged stable_ids into openorgswf
|
2021-03-25 10:44:49 +01:00 |
|
miconis
|
348b0ef921
|
bug fix, implementation of the workflow for the creation of raw_organizations (openorgs dedup), addition of the pid lists to the openorgs postgres db
|
2021-03-24 15:51:27 +01:00 |
|
Claudio Atzori
|
8d2bb24512
|
merged from master
|
2021-03-08 15:44:34 +01:00 |
|
miconis
|
4b2124a18e
|
implementation of the openorgs wfs, implementation of the raw_all wf to migrate openorgs db entities
|
2021-02-10 11:51:50 +01:00 |
|
Michele Artini
|
991e675dc6
|
validation in claim rels
|
2020-12-14 15:41:25 +01:00 |
|
Claudio Atzori
|
12e2f930c8
|
resolved conflicts
|
2020-12-10 10:57:39 +01:00 |
 Miriam Baglioni
|
5fb65ffc4a
|
merge branch with master
|
2020-12-03 11:24:35 +01:00 |
|
Miriam Baglioni
|
ea88dc3401
|
fixed issue in property name
|
2020-12-03 11:24:23 +01:00 |
|
Claudio Atzori
|
893ac4a77b
|
GenerateEntitiesApplication can be configured to hash the id value or not
|
2020-12-02 09:30:06 +01:00 |
|
Miriam Baglioni
|
5fbe54ef54
|
#61 (comment)
|
2020-11-25 18:10:28 +01:00 |
|
Miriam Baglioni
|
ed01e5a5e1
|
#61 (comment)
|
2020-11-25 18:09:34 +01:00 |
|
Miriam Baglioni
|
f5e5e92a10
|
changed because of #61 (comment)
|
2020-11-25 17:58:53 +01:00 |
|
Claudio Atzori
|
dfd6205b95
|
Consistency graph workflow merges all the entities by ID
|
2020-11-25 14:55:32 +01:00 |