[DOIBoost] extended mapping for funder #8407

This commit is contained in:
Miriam Baglioni 2023-02-20 14:45:27 +01:00
parent 016337a0f9
commit d617c3e812
2 changed files with 52 additions and 29 deletions

View File

@ -309,8 +309,6 @@ case object Crossref2Oaf {
result
}
def generateAuhtor(given: String, family: String, orcid: String, index: Int): Author = {
val a = new Author
a.setName(given)
@ -372,28 +370,22 @@ case object Crossref2Oaf {
case dataset: Dataset => convertDataset(dataset)
}
val doisReference:List[String] = for {
JObject(reference_json) <- json \ "reference"
val doisReference: List[String] = for {
JObject(reference_json) <- json \ "reference"
JField("DOI", JString(doi_json)) <- reference_json
} yield doi_json
if (doisReference!= null && doisReference.nonEmpty) {
val citation_relations:List[Relation] = generateCitationRelations(doisReference, result)
if (doisReference != null && doisReference.nonEmpty) {
val citation_relations: List[Relation] = generateCitationRelations(doisReference, result)
resultList = resultList ::: citation_relations
}
resultList = resultList ::: List(result)
resultList
}
private def createCiteRelation(source: Result, targetPid: String, targetPidType: String): List[Relation] = {
private def createCiteRelation(source:Result, targetPid:String, targetPidType:String) :List[Relation] = {
val targetId = IdentifierFactory.idFromPid("50",targetPidType, targetPid, true)
val targetId = IdentifierFactory.idFromPid("50", targetPidType, targetPid, true)
val from = new Relation
from.setSource(source.getId)
@ -405,7 +397,6 @@ case object Crossref2Oaf {
from.setDataInfo(source.getDataInfo)
from.setLastupdatetimestamp(source.getLastupdatetimestamp)
val to = new Relation
to.setTarget(source.getId)
to.setSource(targetId)
@ -416,10 +407,10 @@ case object Crossref2Oaf {
to.setDataInfo(source.getDataInfo)
to.setLastupdatetimestamp(source.getLastupdatetimestamp)
List(from,to)
List(from, to)
}
def generateCitationRelations(dois:List[String], result:Result):List[Relation] = {
def generateCitationRelations(dois: List[String], result: Result): List[Relation] = {
dois.flatMap(d => createCiteRelation(result, d, "doi"))
}
@ -495,6 +486,7 @@ case object Crossref2Oaf {
case "10.13039/501100000781" =>
generateSimpleRelationFromAward(funder, "corda_______", extractECAward)
generateSimpleRelationFromAward(funder, "corda__h2020", extractECAward)
generateSimpleRelationFromAward(funder, "corda_____he", extractECAward)
case "10.13039/100000001" => generateSimpleRelationFromAward(funder, "nsf_________", a => a)
case "10.13039/501100001665" => generateSimpleRelationFromAward(funder, "anr_________", a => a)
case "10.13039/501100002341" => generateSimpleRelationFromAward(funder, "aka_________", a => a)
@ -536,6 +528,34 @@ case object Crossref2Oaf {
val targetId = getProjectId("wt__________", "1e5e62235d094afd01cd56e65112fc63")
queue += generateRelation(sourceId, targetId, ModelConstants.IS_PRODUCED_BY)
queue += generateRelation(targetId, sourceId, ModelConstants.PRODUCES)
//ASAP
case "10.13039/100018231" => generateSimpleRelationFromAward(funder, "asap________", a => a)
//CHIST-ERA
case "10.13039/501100001942" =>
val targetId = getProjectId("chistera____", "1e5e62235d094afd01cd56e65112fc63")
queue += generateRelation(sourceId, targetId, ModelConstants.IS_PRODUCED_BY)
queue += generateRelation(targetId, sourceId, ModelConstants.PRODUCES)
//HE
case "10.13039/100018693" | "10.13039/100018694" | "10.13039/100019188" | "10.13039/100019180" |
"10.13039/100018695" | "10.13039/100019185" | "10.13039/100019186" | "10.13039/100019187" =>
generateSimpleRelationFromAward(funder, "corda_____he", extractECAward)
//FCT
case "10.13039/501100001871" =>
generateSimpleRelationFromAward(funder, "fct_________", extractECAward)
//NHMRC
case "10.13039/501100000925" =>
generateSimpleRelationFromAward(funder, "mhmrc_______", extractECAward)
//NIH
case "10.13039/100000002" =>
generateSimpleRelationFromAward(funder, "nih_________", extractECAward)
//NWO
case "10.13039/501100003246" =>
generateSimpleRelationFromAward(funder, "nwo_________", extractECAward)
//UKRI
case "10.13039/100014013" | "10.13039/501100000267" | "10.13039/501100000268" | "10.13039/501100000269" |
"10.13039/501100000266" | "10.13039/501100006041" | "10.13039/501100000265" | "10.13039/501100000270" |
"10.13039/501100013589" | "10.13039/501100000271" =>
generateSimpleRelationFromAward(funder, "nwo_________", extractECAward)
case _ => logger.debug("no match for " + funder.DOI.get)

View File

@ -114,8 +114,7 @@ class CrossrefMappingTest {
}
private def parseJson(input:String):JValue = {
private def parseJson(input: String): JValue = {
implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats
lazy val json: json4s.JValue = JsonMethods.parse(input)
@ -123,33 +122,37 @@ class CrossrefMappingTest {
}
@Test
def testCitationRelations():Unit = {
val json = Source.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/publication_license_embargo.json")).mkString
def testCitationRelations(): Unit = {
val json = Source
.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/publication_license_embargo.json"))
.mkString
assertNotNull(json)
assertFalse(json.isEmpty)
val result:List[Oaf] = Crossref2Oaf.convert(json)
val result: List[Oaf] = Crossref2Oaf.convert(json)
assertTrue(result.nonEmpty)
val j = parseJson(json)
val doisReference: List[String] = for {
JObject(reference_json) <- j \ "reference"
JObject(reference_json) <- j \ "reference"
JField("DOI", JString(doi_json)) <- reference_json
} yield doi_json
val relationList:List[Relation] = result.filter(s => s.isInstanceOf[Relation]).map(r=> r.asInstanceOf[Relation]).filter(r => r.getSubRelType.equalsIgnoreCase(ModelConstants.CITATION))
val relationList: List[Relation] = result
.filter(s => s.isInstanceOf[Relation])
.map(r => r.asInstanceOf[Relation])
.filter(r => r.getSubRelType.equalsIgnoreCase(ModelConstants.CITATION))
assertNotNull(relationList)
assertFalse(relationList.isEmpty)
assertEquals(doisReference.size*2, relationList.size)
assertEquals(doisReference.size * 2, relationList.size)
mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT)
relationList.foreach(p => println(mapper.writeValueAsString(p)))
}
@Test