forked from D-Net/dnet-hadoop
Add filtering based on citation source
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@ -126,12 +126,19 @@ oa_objects_df = oa_objects_df.drop('deletedbyinference').drop('invisible').disti
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# Collect only valid citations i.e., invisible = false & deletedbyinference=false
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# Collect only valid citations i.e., invisible = false & deletedbyinference=false
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cites_df = spark.read.json(graph_folder + "/relation")\
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cites_df = spark.read.json(graph_folder + "/relation")\
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.select(F.col('source').alias('citing'), F.col('target').alias('cited'), 'relClass', 'dataInfo.deletedbyinference', 'dataInfo.invisible')\
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.select(F.col('source').alias('citing'), F.col('target').alias('cited'), 'collectedfrom.value', 'relClass', 'dataInfo.deletedbyinference', 'dataInfo.invisible')\
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.where( (F.col('relClass') == "Cites") \
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.where( (F.col('relClass') == "Cites") \
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& (F.col('dataInfo.deletedbyinference') == "false")\
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& (F.col('dataInfo.deletedbyinference') == "false")\
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& (F.col('dataInfo.invisible') == "false"))\
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& (F.col('dataInfo.invisible') == "false"))\
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.drop('dataInfo.deletedbyinference').drop('dataInfo.invisible')\
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.drop('dataInfo.deletedbyinference').drop('dataInfo.invisible')\
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.repartition(num_partitions, 'citing').drop('relClass')
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.repartition(num_partitions, 'citing').drop('relClass')\
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.withColumn('collected_lower', F.expr('transform(collectedfrom.value, x -> lower(x))'))\
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.drop('collectedfrom.value')\
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.where(
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(F.array_contains(F.col('collected_lower'), "opencitations"))
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| (F.array_contains(F.col('collected_lower'), "crossref"))
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| (F.array_contains(F.col('collected_lower'), "mag"))
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).drop('collected_lower')
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# print ("Cited df has: " + str(cites_df.count()) + " entries")
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# print ("Cited df has: " + str(cites_df.count()) + " entries")
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# DEPRECATED
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# DEPRECATED
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