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More progress on LaReFerenciaLogs

This commit is contained in:
Spyros Zoupanos 2020-09-20 00:59:33 +03:00
parent 053588c365
commit 2b2bac9b28
3 changed files with 442 additions and 402 deletions
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312
dhp-workflows/dhp-usage-stats-update/src/main/java/eu/dnetlib/oa/graph/usagestats/export/LaReferenciaDownloadLogs.java
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@ -1,10 +1,5 @@
package eu.dnetlib.oa.graph.usagestats.export;
import org.apache.hadoop.conf.Configuration; package eu.dnetlib.oa.graph.usagestats.export;
import org.apache.hadoop.fs.FSDataOutputStream;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.fs.FileSystem;
import org.apache.log4j.Logger;
import java.io.*; import java.io.*;
import java.net.URL; import java.net.URL;
@ -13,182 +8,211 @@ import java.sql.PreparedStatement;
import java.sql.ResultSet; import java.sql.ResultSet;
import java.sql.Statement; import java.sql.Statement;
import java.text.SimpleDateFormat; import java.text.SimpleDateFormat;
import java.util.Date;
import java.util.Calendar; import java.util.Calendar;
import java.util.Date;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataOutputStream;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.log4j.Logger;
import org.json.simple.JSONArray; import org.json.simple.JSONArray;
import org.json.simple.JSONObject; import org.json.simple.JSONObject;
import org.json.simple.parser.JSONParser; import org.json.simple.parser.JSONParser;
public class LaReferenciaDownloadLogs { public class LaReferenciaDownloadLogs {
private final String piwikUrl; private final String piwikUrl;
private Date startDate; private Date startDate;
private final String tokenAuth; private final String tokenAuth;
/* /*
The Piwik's API method * The Piwik's API method
*/ */
private final String APImethod = "?module=API&method=Live.getLastVisitsDetails"; private final String APImethod = "?module=API&method=Live.getLastVisitsDetails";
private final String format = "&format=json"; private final String format = "&format=json";
private final String ApimethodGetAllSites = "?module=API&method=SitesManager.getSitesWithViewAccess"; private final String ApimethodGetAllSites = "?module=API&method=SitesManager.getSitesWithViewAccess";
private final Logger log = Logger.getLogger(this.getClass()); private final Logger log = Logger.getLogger(this.getClass());
public LaReferenciaDownloadLogs(String piwikUrl, String tokenAuth) throws Exception { public LaReferenciaDownloadLogs(String piwikUrl, String tokenAuth) throws Exception {
this.piwikUrl = piwikUrl; this.piwikUrl = piwikUrl;
this.tokenAuth = tokenAuth; this.tokenAuth = tokenAuth;
this.createTables(); this.createTables();
this.createTmpTables(); // this.createTmpTables();
} }
private void createTables() throws Exception {
try {
Statement stmt = ConnectDB.getConnection().createStatement();
String sqlCreateTableLareferenciaLog = "CREATE TABLE IF NOT EXISTS lareferencialog(matomoid INTEGER, source TEXT, id_visit TEXT, country TEXT, action TEXT, url TEXT, entity_id TEXT, source_item_type TEXT, timestamp TEXT, referrer_name TEXT, agent TEXT, PRIMARY KEY(source, id_visit, action, timestamp, entity_id));";
String sqlcreateRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS "
+ " ON INSERT TO lareferencialog "
+ " WHERE (EXISTS ( SELECT lareferencialog.matomoid, lareferencialog.source, lareferencialog.id_visit,"
+ "lareferencialog.action, lareferencialog.\"timestamp\", lareferencialog.entity_id "
+ "FROM lareferencialog "
+ "WHERE lareferencialog.matomoid=new.matomoid AND lareferencialog.source = new.source AND lareferencialog.id_visit = new.id_visit AND lareferencialog.action = new.action AND lareferencialog.entity_id = new.entity_id AND lareferencialog.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;";
String sqlCreateRuleIndexLaReferenciaLog = "create index if not exists lareferencialog_rule on lareferencialog(matomoid, source, id_visit, action, entity_id, \"timestamp\");";
stmt.executeUpdate(sqlCreateTableLareferenciaLog);
stmt.executeUpdate(sqlcreateRuleLaReferenciaLog);
stmt.executeUpdate(sqlCreateRuleIndexLaReferenciaLog);
stmt.close(); private void createTables() throws Exception {
ConnectDB.getConnection().close(); try {
log.info("Lareferencia Tables Created"); Statement stmt = ConnectDB.getConnection().createStatement();
} catch (Exception e) { System.out.println("====> Creating LaReferencia tables");
log.error("Failed to create tables: " + e); String sqlCreateTableLareferenciaLog = "CREATE TABLE IF NOT EXISTS " +
throw new Exception("Failed to create tables: " + e.toString(), e); ConnectDB.getUsageStatsDBSchema() + ".lareferencialog(matomoid INT, " +
//System.exit(0); "source STRING, id_visit STRING, country STRING, action STRING, url STRING, entity_id STRING, " +
} "source_item_type STRING, timestamp STRING, referrer_name STRING, agent STRING) " +
} "clustered by (source, id_visit, action, timestamp, entity_id) into 100 buckets " +
"stored as orc tblproperties('transactional'='true')";
stmt.executeUpdate(sqlCreateTableLareferenciaLog);
System.out.println("====> Created LaReferencia tables");
// String sqlcreateRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS "
// + " ON INSERT TO lareferencialog "
// + " WHERE (EXISTS ( SELECT lareferencialog.matomoid, lareferencialog.source, lareferencialog.id_visit,"
// + "lareferencialog.action, lareferencialog.\"timestamp\", lareferencialog.entity_id "
// + "FROM lareferencialog "
// + "WHERE lareferencialog.matomoid=new.matomoid AND lareferencialog.source = new.source AND lareferencialog.id_visit = new.id_visit AND lareferencialog.action = new.action AND lareferencialog.entity_id = new.entity_id AND lareferencialog.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;";
// String sqlCreateRuleIndexLaReferenciaLog = "create index if not exists lareferencialog_rule on lareferencialog(matomoid, source, id_visit, action, entity_id, \"timestamp\");";
// stmt.executeUpdate(sqlcreateRuleLaReferenciaLog);
// stmt.executeUpdate(sqlCreateRuleIndexLaReferenciaLog);
private void createTmpTables() throws Exception { stmt.close();
ConnectDB.getConnection().close();
log.info("Lareferencia Tables Created");
try { } catch (Exception e) {
Statement stmt = ConnectDB.getConnection().createStatement(); log.error("Failed to create tables: " + e);
String sqlCreateTmpTableLaReferenciaLog = "CREATE TABLE IF NOT EXISTS lareferencialogtmp(matomoid INTEGER, source TEXT, id_visit TEXT, country TEXT, action TEXT, url TEXT, entity_id TEXT, source_item_type TEXT, timestamp TEXT, referrer_name TEXT, agent TEXT, PRIMARY KEY(source, id_visit, action, timestamp, entity_id));"; throw new Exception("Failed to create tables: " + e.toString(), e);
String sqlcreateTmpRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS " // System.exit(0);
+ " ON INSERT TO lareferencialogtmp " }
+ " WHERE (EXISTS ( SELECT lareferencialogtmp.matomoid, lareferencialogtmp.source, lareferencialogtmp.id_visit," }
+ "lareferencialogtmp.action, lareferencialogtmp.\"timestamp\", lareferencialogtmp.entity_id "
+ "FROM lareferencialogtmp "
+ "WHERE lareferencialogtmp.matomoid=new.matomoid AND lareferencialogtmp.source = new.source AND lareferencialogtmp.id_visit = new.id_visit AND lareferencialogtmp.action = new.action AND lareferencialogtmp.entity_id = new.entity_id AND lareferencialogtmp.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;";
stmt.executeUpdate(sqlCreateTmpTableLaReferenciaLog);
stmt.executeUpdate(sqlcreateTmpRuleLaReferenciaLog);
stmt.close(); private void createTmpTables() throws Exception {
log.info("Lareferencia Tmp Tables Created");
} catch (Exception e) { try {
log.error("Failed to create tmptables: " + e); Statement stmt = ConnectDB.getConnection().createStatement();
throw new Exception("Failed to create tmp tables: " + e.toString(), e); String sqlCreateTmpTableLaReferenciaLog = "CREATE TABLE IF NOT EXISTS lareferencialogtmp(matomoid INTEGER, source TEXT, id_visit TEXT, country TEXT, action TEXT, url TEXT, entity_id TEXT, source_item_type TEXT, timestamp TEXT, referrer_name TEXT, agent TEXT, PRIMARY KEY(source, id_visit, action, timestamp, entity_id));";
//System.exit(0); String sqlcreateTmpRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS "
} + " ON INSERT TO lareferencialogtmp "
} + " WHERE (EXISTS ( SELECT lareferencialogtmp.matomoid, lareferencialogtmp.source, lareferencialogtmp.id_visit,"
private String getPiwikLogUrl() { + "lareferencialogtmp.action, lareferencialogtmp.\"timestamp\", lareferencialogtmp.entity_id "
return piwikUrl + "/"; + "FROM lareferencialogtmp "
} + "WHERE lareferencialogtmp.matomoid=new.matomoid AND lareferencialogtmp.source = new.source AND lareferencialogtmp.id_visit = new.id_visit AND lareferencialogtmp.action = new.action AND lareferencialogtmp.entity_id = new.entity_id AND lareferencialogtmp.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;";
stmt.executeUpdate(sqlCreateTmpTableLaReferenciaLog);
stmt.executeUpdate(sqlcreateTmpRuleLaReferenciaLog);
private String getJson(String url) throws Exception { stmt.close();
try { log.info("Lareferencia Tmp Tables Created");
URL website = new URL(url);
URLConnection connection = website.openConnection();
StringBuilder response; } catch (Exception e) {
try (BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream()))) { log.error("Failed to create tmptables: " + e);
response = new StringBuilder(); throw new Exception("Failed to create tmp tables: " + e.toString(), e);
String inputLine; // System.exit(0);
while ((inputLine = in.readLine()) != null) { }
response.append(inputLine); }
response.append("\n");
}
}
return response.toString();
} catch (Exception e) {
log.error("Failed to get URL: " + e);
throw new Exception("Failed to get URL: " + e.toString(), e);
}
}
public void GetLaReferenciaRepos(String repoLogsPath) throws Exception { private String getPiwikLogUrl() {
return piwikUrl + "/";
}
String baseApiUrl = getPiwikLogUrl() + ApimethodGetAllSites + format + "&token_auth=" + this.tokenAuth; private String getJson(String url) throws Exception {
String content = ""; try {
URL website = new URL(url);
URLConnection connection = website.openConnection();
content = getJson(baseApiUrl); StringBuilder response;
JSONParser parser = new JSONParser(); try (BufferedReader in = new BufferedReader(new InputStreamReader(connection.getInputStream()))) {
JSONArray jsonArray = (JSONArray) parser.parse(content); response = new StringBuilder();
for (Object aJsonArray : jsonArray) { String inputLine;
JSONObject jsonObjectRow = (JSONObject) aJsonArray; while ((inputLine = in.readLine()) != null) {
int idSite = Integer.parseInt(jsonObjectRow.get("idsite").toString()); response.append(inputLine);
this.GetLaReFerenciaLogs(repoLogsPath, idSite); response.append("\n");
} }
} }
return response.toString();
} catch (Exception e) {
log.error("Failed to get URL: " + e);
throw new Exception("Failed to get URL: " + e.toString(), e);
}
}
public void GetLaReFerenciaLogs(String repoLogsPath, public void GetLaReferenciaRepos(String repoLogsPath) throws Exception {
int laReferencialMatomoID) throws Exception {
SimpleDateFormat simpleDateFormat = new SimpleDateFormat("YYYY-MM"); String baseApiUrl = getPiwikLogUrl() + ApimethodGetAllSites + format + "&token_auth=" + this.tokenAuth;
String content = "";
Calendar start = Calendar.getInstance(); content = getJson(baseApiUrl);
start.set(Calendar.YEAR, 2020); JSONParser parser = new JSONParser();
start.set(Calendar.MONTH, Calendar.JANUARY); JSONArray jsonArray = (JSONArray) parser.parse(content);
start.set(Calendar.DAY_OF_MONTH, 1); for (Object aJsonArray : jsonArray) {
JSONObject jsonObjectRow = (JSONObject) aJsonArray;
int idSite = Integer.parseInt(jsonObjectRow.get("idsite").toString());
this.GetLaReFerenciaLogs(repoLogsPath, idSite);
}
}
Calendar end = Calendar.getInstance(); public void GetLaReFerenciaLogs(String repoLogsPath,
end.add(Calendar.DAY_OF_MONTH, -1); int laReferencialMatomoID) throws Exception {
SimpleDateFormat sdf = new SimpleDateFormat("yyyy-MM-dd"); SimpleDateFormat simpleDateFormat = new SimpleDateFormat("YYYY-MM");
PreparedStatement st = ConnectDB.getConnection().prepareStatement("SELECT max(timestamp) FROM lareferencialog WHERE matomoid=? HAVING max(timestamp) is not null;");
st.setInt(1, laReferencialMatomoID);
ResultSet rs_date = st.executeQuery(); Calendar start = Calendar.getInstance();
while (rs_date.next()) { start.set(Calendar.YEAR, 2020);
if (rs_date.getString(1) != null && !rs_date.getString(1).equals("null") && !rs_date.getString(1).equals("")) { start.set(Calendar.MONTH, Calendar.JANUARY);
start.setTime(sdf.parse(rs_date.getString(1))); start.set(Calendar.DAY_OF_MONTH, 1);
}
}
rs_date.close();
for (Date date = start.getTime(); start.before(end); start.add(Calendar.DATE, 1), date = start.getTime()) { Calendar end = Calendar.getInstance();
log.info("Downloading logs for LaReferencia repoid " + laReferencialMatomoID + " and for " + sdf.format(date)); end.add(Calendar.DAY_OF_MONTH, -1);
String period = "&period=day&date=" + sdf.format(date); SimpleDateFormat sdf = new SimpleDateFormat("yyyy-MM-dd");
String outFolder = ""; PreparedStatement st = ConnectDB
outFolder = repoLogsPath; .getConnection()
.prepareStatement(
"SELECT max(timestamp) FROM " + ConnectDB.getUsageStatsDBSchema() +
".lareferencialog WHERE matomoid=? HAVING max(timestamp) is not null");
st.setInt(1, laReferencialMatomoID);
FileSystem fs = FileSystem.get(new Configuration()); ResultSet rs_date = st.executeQuery();
while (rs_date.next()) {
if (rs_date.getString(1) != null && !rs_date.getString(1).equals("null")
&& !rs_date.getString(1).equals("")) {
start.setTime(sdf.parse(rs_date.getString(1)));
}
}
rs_date.close();
String baseApiUrl = getPiwikLogUrl() + APImethod + "&idSite=" + laReferencialMatomoID + period + format + "&expanded=5&filter_limit=1000&token_auth=" + tokenAuth; for (Date date = start.getTime(); start.before(end); start.add(Calendar.DATE, 1), date = start.getTime()) {
String content = ""; log
.info(
"Downloading logs for LaReferencia repoid " + laReferencialMatomoID + " and for "
+ sdf.format(date));
int i = 0; String period = "&period=day&date=" + sdf.format(date);
String outFolder = "";
outFolder = repoLogsPath;
while (!content.equals("[]\n")) { FileSystem fs = FileSystem.get(new Configuration());
FSDataOutputStream fin = fs.create(new Path(outFolder + "/" + laReferencialMatomoID + "_LaRefPiwiklog" + sdf.format((date)) + "_" + i + ".json"), true); String baseApiUrl = getPiwikLogUrl() + APImethod + "&idSite=" + laReferencialMatomoID + period + format
String apiUrl = baseApiUrl; + "&expanded=5&filter_limit=1000&token_auth=" + tokenAuth;
String content = "";
if (i > 0) { int i = 0;
apiUrl += "&filter_offset=" + (i * 1000);
}
content = getJson(apiUrl); while (!content.equals("[]\n")) {
fin.write(content.getBytes()); FSDataOutputStream fin = fs
.create(
new Path(outFolder + "/" + laReferencialMatomoID + "_LaRefPiwiklog" + sdf.format((date)) + "_"
+ i + ".json"),
true);
String apiUrl = baseApiUrl;
i++; if (i > 0) {
fin.close(); apiUrl += "&filter_offset=" + (i * 1000);
} }
//fin.close();
//out.close();
} content = getJson(apiUrl);
// } fin.write(content.getBytes());
}
i++;
fin.close();
}
// fin.close();
// out.close();
}
// }
}
} }

517
dhp-workflows/dhp-usage-stats-update/src/main/java/eu/dnetlib/oa/graph/usagestats/export/LaReferenciaStats.java
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@ -1,3 +1,4 @@
package eu.dnetlib.oa.graph.usagestats.export; package eu.dnetlib.oa.graph.usagestats.export;
import java.io.*; import java.io.*;
@ -13,9 +14,9 @@ import java.util.regex.Matcher;
import java.util.regex.Pattern; import java.util.regex.Pattern;
import org.apache.hadoop.conf.Configuration; import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.LocatedFileStatus; import org.apache.hadoop.fs.LocatedFileStatus;
import org.apache.hadoop.fs.Path; import org.apache.hadoop.fs.Path;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.RemoteIterator; import org.apache.hadoop.fs.RemoteIterator;
import org.apache.log4j.Logger; import org.apache.log4j.Logger;
import org.json.simple.JSONArray; import org.json.simple.JSONArray;
@ -24,310 +25,324 @@ import org.json.simple.parser.JSONParser;
public class LaReferenciaStats { public class LaReferenciaStats {
private String logRepoPath; private String logRepoPath;
private Statement stmt = null; private Statement stmt = null;
private final Logger log = Logger.getLogger(this.getClass()); private final Logger log = Logger.getLogger(this.getClass());
private String CounterRobotsURL; private String CounterRobotsURL;
private ArrayList robotsList; private ArrayList robotsList;
public LaReferenciaStats(String logRepoPath) throws Exception { public LaReferenciaStats(String logRepoPath) throws Exception {
this.logRepoPath = logRepoPath; this.logRepoPath = logRepoPath;
this.createTables(); this.createTables();
this.createTmpTables(); this.createTmpTables();
} }
/* /*
private void connectDB() throws Exception { * private void connectDB() throws Exception { try { ConnectDB connectDB = new ConnectDB(); } catch (Exception e) {
try { * log.error("Connect to db failed: " + e); throw new Exception("Failed to connect to db: " + e.toString(), e); } }
ConnectDB connectDB = new ConnectDB(); */
} catch (Exception e) { private void createTables() throws Exception {
log.error("Connect to db failed: " + e); try {
throw new Exception("Failed to connect to db: " + e.toString(), e); Statement stmt = ConnectDB.getConnection().createStatement();
} String sqlCreateTableLareferenciaLog = "CREATE TABLE IF NOT EXISTS lareferencialog(matomoid INTEGER, source TEXT, id_visit TEXT, country TEXT, action TEXT, url TEXT, entity_id TEXT, source_item_type TEXT, timestamp TEXT, referrer_name TEXT, agent TEXT, PRIMARY KEY(source, id_visit, action, timestamp, entity_id));";
} String sqlcreateRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS "
*/ + " ON INSERT TO lareferencialog "
private void createTables() throws Exception { + " WHERE (EXISTS ( SELECT lareferencialog.matomoid, lareferencialog.source, lareferencialog.id_visit,"
try { + "lareferencialog.action, lareferencialog.\"timestamp\", lareferencialog.entity_id "
Statement stmt = ConnectDB.getConnection().createStatement(); + "FROM lareferencialog "
String sqlCreateTableLareferenciaLog = "CREATE TABLE IF NOT EXISTS lareferencialog(matomoid INTEGER, source TEXT, id_visit TEXT, country TEXT, action TEXT, url TEXT, entity_id TEXT, source_item_type TEXT, timestamp TEXT, referrer_name TEXT, agent TEXT, PRIMARY KEY(source, id_visit, action, timestamp, entity_id));"; + "WHERE lareferencialog.matomoid=new.matomoid AND lareferencialog.source = new.source AND lareferencialog.id_visit = new.id_visit AND lareferencialog.action = new.action AND lareferencialog.entity_id = new.entity_id AND lareferencialog.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;";
String sqlcreateRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS " String sqlCreateRuleIndexLaReferenciaLog = "create index if not exists lareferencialog_rule on lareferencialog(matomoid, source, id_visit, action, entity_id, \"timestamp\");";
+ " ON INSERT TO lareferencialog " stmt.executeUpdate(sqlCreateTableLareferenciaLog);
+ " WHERE (EXISTS ( SELECT lareferencialog.matomoid, lareferencialog.source, lareferencialog.id_visit," stmt.executeUpdate(sqlcreateRuleLaReferenciaLog);
+ "lareferencialog.action, lareferencialog.\"timestamp\", lareferencialog.entity_id " stmt.executeUpdate(sqlCreateRuleIndexLaReferenciaLog);
+ "FROM lareferencialog "
+ "WHERE lareferencialog.matomoid=new.matomoid AND lareferencialog.source = new.source AND lareferencialog.id_visit = new.id_visit AND lareferencialog.action = new.action AND lareferencialog.entity_id = new.entity_id AND lareferencialog.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;";
String sqlCreateRuleIndexLaReferenciaLog = "create index if not exists lareferencialog_rule on lareferencialog(matomoid, source, id_visit, action, entity_id, \"timestamp\");";
stmt.executeUpdate(sqlCreateTableLareferenciaLog);
stmt.executeUpdate(sqlcreateRuleLaReferenciaLog);
stmt.executeUpdate(sqlCreateRuleIndexLaReferenciaLog);
stmt.close(); stmt.close();
ConnectDB.getConnection().close(); ConnectDB.getConnection().close();
log.info("Lareferencia Tables Created"); log.info("Lareferencia Tables Created");
} catch (Exception e) { } catch (Exception e) {
log.error("Failed to create tables: " + e); log.error("Failed to create tables: " + e);
throw new Exception("Failed to create tables: " + e.toString(), e); throw new Exception("Failed to create tables: " + e.toString(), e);
//System.exit(0); // System.exit(0);
} }
} }
private void createTmpTables() throws Exception { private void createTmpTables() throws Exception {
try { try {
Statement stmt = ConnectDB.getConnection().createStatement(); Statement stmt = ConnectDB.getConnection().createStatement();
String sqlCreateTmpTableLaReferenciaLog = "CREATE TABLE IF NOT EXISTS lareferencialogtmp(matomoid INTEGER, source TEXT, id_visit TEXT, country TEXT, action TEXT, url TEXT, entity_id TEXT, source_item_type TEXT, timestamp TEXT, referrer_name TEXT, agent TEXT, PRIMARY KEY(source, id_visit, action, timestamp, entity_id));"; String sqlCreateTmpTableLaReferenciaLog = "CREATE TABLE IF NOT EXISTS lareferencialogtmp(matomoid INTEGER, source TEXT, id_visit TEXT, country TEXT, action TEXT, url TEXT, entity_id TEXT, source_item_type TEXT, timestamp TEXT, referrer_name TEXT, agent TEXT, PRIMARY KEY(source, id_visit, action, timestamp, entity_id));";
String sqlcreateTmpRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS " String sqlcreateTmpRuleLaReferenciaLog = "CREATE OR REPLACE RULE ignore_duplicate_inserts AS "
+ " ON INSERT TO lareferencialogtmp " + " ON INSERT TO lareferencialogtmp "
+ " WHERE (EXISTS ( SELECT lareferencialogtmp.matomoid, lareferencialogtmp.source, lareferencialogtmp.id_visit," + " WHERE (EXISTS ( SELECT lareferencialogtmp.matomoid, lareferencialogtmp.source, lareferencialogtmp.id_visit,"
+ "lareferencialogtmp.action, lareferencialogtmp.\"timestamp\", lareferencialogtmp.entity_id " + "lareferencialogtmp.action, lareferencialogtmp.\"timestamp\", lareferencialogtmp.entity_id "
+ "FROM lareferencialogtmp " + "FROM lareferencialogtmp "
+ "WHERE lareferencialogtmp.matomoid=new.matomoid AND lareferencialogtmp.source = new.source AND lareferencialogtmp.id_visit = new.id_visit AND lareferencialogtmp.action = new.action AND lareferencialogtmp.entity_id = new.entity_id AND lareferencialogtmp.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;"; + "WHERE lareferencialogtmp.matomoid=new.matomoid AND lareferencialogtmp.source = new.source AND lareferencialogtmp.id_visit = new.id_visit AND lareferencialogtmp.action = new.action AND lareferencialogtmp.entity_id = new.entity_id AND lareferencialogtmp.\"timestamp\" = new.\"timestamp\")) DO INSTEAD NOTHING;";
stmt.executeUpdate(sqlCreateTmpTableLaReferenciaLog); stmt.executeUpdate(sqlCreateTmpTableLaReferenciaLog);
stmt.executeUpdate(sqlcreateTmpRuleLaReferenciaLog); stmt.executeUpdate(sqlcreateTmpRuleLaReferenciaLog);
stmt.close(); stmt.close();
log.info("Lareferencia Tmp Tables Created"); log.info("Lareferencia Tmp Tables Created");
} catch (Exception e) { } catch (Exception e) {
log.error("Failed to create tmptables: " + e); log.error("Failed to create tmptables: " + e);
throw new Exception("Failed to create tmp tables: " + e.toString(), e); throw new Exception("Failed to create tmp tables: " + e.toString(), e);
//System.exit(0); // System.exit(0);
} }
} }
public void processLogs() throws Exception { public void processLogs() throws Exception {
try { try {
processlaReferenciaLog(); processlaReferenciaLog();
log.info("LaReferencia repository process done"); log.info("LaReferencia repository process done");
removeDoubleClicks(); removeDoubleClicks();
log.info("LaReferencia removing double clicks done"); log.info("LaReferencia removing double clicks done");
viewsStats(); viewsStats();
log.info("LaReferencia views done"); log.info("LaReferencia views done");
downloadsStats(); downloadsStats();
log.info("LaReferencia downloads done"); log.info("LaReferencia downloads done");
updateProdTables(); updateProdTables();
log.info("LaReferencia update productions tables done"); log.info("LaReferencia update productions tables done");
} catch (Exception e) { } catch (Exception e) {
log.error("Failed to process logs: " + e); log.error("Failed to process logs: " + e);
throw new Exception("Failed to process logs: " + e.toString(), e); throw new Exception("Failed to process logs: " + e.toString(), e);
} }
} }
public void processlaReferenciaLog() throws Exception { public void processlaReferenciaLog() throws Exception {
Statement stmt = ConnectDB.getConnection().createStatement(); Statement stmt = ConnectDB.getConnection().createStatement();
ConnectDB.getConnection().setAutoCommit(false); ConnectDB.getConnection().setAutoCommit(false);
ArrayList<String> jsonFiles = listHdfsDir(this.logRepoPath); ArrayList<String> jsonFiles = listHdfsDir(this.logRepoPath);
//File dir = new File(this.logRepoPath); // File dir = new File(this.logRepoPath);
//File[] jsonFiles = dir.listFiles(); // File[] jsonFiles = dir.listFiles();
PreparedStatement prepStatem = ConnectDB.getConnection().prepareStatement("INSERT INTO lareferencialogtmp (matomoid, source, id_visit, country, action, url, entity_id, source_item_type, timestamp, referrer_name, agent) VALUES (?,?,?,?,?,?,?,?,?,?,?)"); PreparedStatement prepStatem = ConnectDB
int batch_size = 0; .getConnection()
.prepareStatement(
"INSERT INTO lareferencialogtmp (matomoid, source, id_visit, country, action, url, entity_id, source_item_type, timestamp, referrer_name, agent) VALUES (?,?,?,?,?,?,?,?,?,?,?)");
int batch_size = 0;
JSONParser parser = new JSONParser(); JSONParser parser = new JSONParser();
for (String jsonFile : jsonFiles) { for (String jsonFile : jsonFiles) {
System.out.println(jsonFile); System.out.println(jsonFile);
JSONArray jsonArray = (JSONArray) parser.parse(readHDFSFile(jsonFile)); JSONArray jsonArray = (JSONArray) parser.parse(readHDFSFile(jsonFile));
for (Object aJsonArray : jsonArray) { for (Object aJsonArray : jsonArray) {
JSONObject jsonObjectRow = (JSONObject) aJsonArray; JSONObject jsonObjectRow = (JSONObject) aJsonArray;
int idSite = Integer.parseInt(jsonObjectRow.get("idSite").toString()); int idSite = Integer.parseInt(jsonObjectRow.get("idSite").toString());
String idVisit = jsonObjectRow.get("idVisit").toString(); String idVisit = jsonObjectRow.get("idVisit").toString();
String country = jsonObjectRow.get("country").toString(); String country = jsonObjectRow.get("country").toString();
String referrerName = jsonObjectRow.get("referrerName").toString(); String referrerName = jsonObjectRow.get("referrerName").toString();
String agent = jsonObjectRow.get("browser").toString(); String agent = jsonObjectRow.get("browser").toString();
String sourceItemType = "repItem"; String sourceItemType = "repItem";
JSONArray actionDetails = (JSONArray) jsonObjectRow.get(("actionDetails")); JSONArray actionDetails = (JSONArray) jsonObjectRow.get(("actionDetails"));
for (Object actionDetail : actionDetails) { for (Object actionDetail : actionDetails) {
JSONObject actionDetailsObj = (JSONObject) actionDetail; JSONObject actionDetailsObj = (JSONObject) actionDetail;
if (actionDetailsObj.get("customVariables") != null) { if (actionDetailsObj.get("customVariables") != null) {
SimpleDateFormat simpleDateFormat = new SimpleDateFormat("yyyy-MM-dd HH:mm:ss"); SimpleDateFormat simpleDateFormat = new SimpleDateFormat("yyyy-MM-dd HH:mm:ss");
simpleDateFormat.setTimeZone(TimeZone.getTimeZone("UTC")); simpleDateFormat.setTimeZone(TimeZone.getTimeZone("UTC"));
Timestamp timestamp = new Timestamp(Long.parseLong(actionDetailsObj.get("timestamp").toString()) * 1000); Timestamp timestamp = new Timestamp(
String url = actionDetailsObj.get("url").toString(); Long.parseLong(actionDetailsObj.get("timestamp").toString()) * 1000);
String oaipmh = ((JSONObject) ((JSONObject) actionDetailsObj.get("customVariables")).get("1")).get("customVariablePageValue1").toString(); String url = actionDetailsObj.get("url").toString();
String opendoar = ((JSONObject) ((JSONObject) actionDetailsObj.get("customVariables")).get("2")).get("customVariablePageValue2").toString(); String oaipmh = ((JSONObject) ((JSONObject) actionDetailsObj.get("customVariables")).get("1"))
String action = actionDetailsObj.get("type").toString(); .get("customVariablePageValue1")
prepStatem.setInt(1, idSite); .toString();
prepStatem.setString(2, "opendoar____::" + opendoar); String opendoar = ((JSONObject) ((JSONObject) actionDetailsObj.get("customVariables")).get("2"))
prepStatem.setString(3, idVisit); .get("customVariablePageValue2")
prepStatem.setString(4, country); .toString();
prepStatem.setString(5, action); String action = actionDetailsObj.get("type").toString();
prepStatem.setString(6, url); prepStatem.setInt(1, idSite);
prepStatem.setString(7, oaipmh); prepStatem.setString(2, "opendoar____::" + opendoar);
prepStatem.setString(8, sourceItemType); prepStatem.setString(3, idVisit);
prepStatem.setString(9, simpleDateFormat.format(timestamp)); prepStatem.setString(4, country);
prepStatem.setString(10, referrerName); prepStatem.setString(5, action);
prepStatem.setString(11, agent); prepStatem.setString(6, url);
//prepStatem.setString(11, ); prepStatem.setString(7, oaipmh);
prepStatem.addBatch(); prepStatem.setString(8, sourceItemType);
batch_size++; prepStatem.setString(9, simpleDateFormat.format(timestamp));
if (batch_size == 10000) { prepStatem.setString(10, referrerName);
prepStatem.executeBatch(); prepStatem.setString(11, agent);
ConnectDB.getConnection().commit(); // prepStatem.setString(11, );
batch_size = 0; prepStatem.addBatch();
} batch_size++;
} if (batch_size == 10000) {
} prepStatem.executeBatch();
} ConnectDB.getConnection().commit();
} batch_size = 0;
try { }
prepStatem.executeBatch(); }
ConnectDB.getConnection().commit(); }
stmt.close(); }
} catch (Exception e) { }
try {
prepStatem.executeBatch();
ConnectDB.getConnection().commit();
stmt.close();
} catch (Exception e) {
if (e instanceof java.sql.SQLException) { if (e instanceof java.sql.SQLException) {
java.sql.SQLException ne = ((java.sql.SQLException) e).getNextException(); java.sql.SQLException ne = ((java.sql.SQLException) e).getNextException();
System.out.println(ne.getMessage()); System.out.println(ne.getMessage());
} }
} }
} }
public void removeDoubleClicks() throws Exception { public void removeDoubleClicks() throws Exception {
Statement stmt = ConnectDB.getConnection().createStatement(); Statement stmt = ConnectDB.getConnection().createStatement();
ConnectDB.getConnection().setAutoCommit(false); ConnectDB.getConnection().setAutoCommit(false);
//clean download double clicks // clean download double clicks
String sql = "DELETE FROM lareferencialogtmp p WHERE EXISTS (SELECT DISTINCT p1.source, p1.id_visit, p1.action, p1.entity_id, p1.timestamp FROM lareferencialogtmp p1, lareferencialogtmp p2 WHERE p1.source=p2.source AND p1.id_visit=p2.id_visit AND p1.entity_id=p2.entity_id AND p1.action=p2.action AND p1.action='download' AND p1.timestamp!=p2.timestamp AND p1.timestamp<p2.timestamp AND extract(EPOCH FROM p2.timestamp::timestamp-p1.timestamp::timestamp)<30 AND p.source=p1.source AND p.id_visit=p1.id_visit AND p.action=p1.action AND p.entity_id=p1.entity_id AND p.timestamp=p1.timestamp);"; String sql = "DELETE FROM lareferencialogtmp p WHERE EXISTS (SELECT DISTINCT p1.source, p1.id_visit, p1.action, p1.entity_id, p1.timestamp FROM lareferencialogtmp p1, lareferencialogtmp p2 WHERE p1.source=p2.source AND p1.id_visit=p2.id_visit AND p1.entity_id=p2.entity_id AND p1.action=p2.action AND p1.action='download' AND p1.timestamp!=p2.timestamp AND p1.timestamp<p2.timestamp AND extract(EPOCH FROM p2.timestamp::timestamp-p1.timestamp::timestamp)<30 AND p.source=p1.source AND p.id_visit=p1.id_visit AND p.action=p1.action AND p.entity_id=p1.entity_id AND p.timestamp=p1.timestamp);";
stmt.executeUpdate(sql); stmt.executeUpdate(sql);
stmt.close(); stmt.close();
ConnectDB.getConnection().commit(); ConnectDB.getConnection().commit();
stmt = ConnectDB.getConnection().createStatement(); stmt = ConnectDB.getConnection().createStatement();
//clean view double clicks // clean view double clicks
sql = "DELETE FROM lareferencialogtmp p WHERE EXISTS (SELECT DISTINCT p1.source, p1.id_visit, p1.action, p1.entity_id, p1.timestamp from lareferencialogtmp p1, lareferencialogtmp p2 WHERE p1.source=p2.source AND p1.id_visit=p2.id_visit AND p1.entity_id=p2.entity_id AND p1.action=p2.action AND p1.action='action' AND p1.timestamp!=p2.timestamp AND p1.timestamp<p2.timestamp AND extract(EPOCH FROM p2.timestamp::timestamp-p1.timestamp::timestamp)<10 AND p.source=p1.source AND p.id_visit=p1.id_visit AND p.action=p1.action AND p.entity_id=p1.entity_id AND p.timestamp=p1.timestamp);"; sql = "DELETE FROM lareferencialogtmp p WHERE EXISTS (SELECT DISTINCT p1.source, p1.id_visit, p1.action, p1.entity_id, p1.timestamp from lareferencialogtmp p1, lareferencialogtmp p2 WHERE p1.source=p2.source AND p1.id_visit=p2.id_visit AND p1.entity_id=p2.entity_id AND p1.action=p2.action AND p1.action='action' AND p1.timestamp!=p2.timestamp AND p1.timestamp<p2.timestamp AND extract(EPOCH FROM p2.timestamp::timestamp-p1.timestamp::timestamp)<10 AND p.source=p1.source AND p.id_visit=p1.id_visit AND p.action=p1.action AND p.entity_id=p1.entity_id AND p.timestamp=p1.timestamp);";
stmt.executeUpdate(sql); stmt.executeUpdate(sql);
stmt.close(); stmt.close();
ConnectDB.getConnection().commit(); ConnectDB.getConnection().commit();
//conn.close(); // conn.close();
} }
public void viewsStats() throws Exception { public void viewsStats() throws Exception {
Statement stmt = ConnectDB.getConnection().createStatement(); Statement stmt = ConnectDB.getConnection().createStatement();
ConnectDB.getConnection().setAutoCommit(false); ConnectDB.getConnection().setAutoCommit(false);
//String sql = "CREATE OR REPLACE VIEW result_views_monthly AS SELECT entity_id AS id, COUNT(entity_id) as views, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS VARCHAR), 2, '0') AS month, source FROM lareferencialog where action='action' and (source_item_type='oaItem' or source_item_type='repItem') group by id, month, source order by source, id, month;"; // String sql = "CREATE OR REPLACE VIEW result_views_monthly AS SELECT entity_id AS id, COUNT(entity_id) as
String sql = "CREATE OR REPLACE VIEW la_result_views_monthly_tmp AS SELECT entity_id AS id, COUNT(entity_id) as views, SUM(CASE WHEN referrer_name LIKE '%openaire%' THEN 1 ELSE 0 END) AS openaire_referrer, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS VARCHAR), 2, '0') AS month, source FROM lareferencialogtmp where action='action' and (source_item_type='oaItem' or source_item_type='repItem') group by id, month, source order by source, id, month;"; // views, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS
stmt.executeUpdate(sql); // VARCHAR), 2, '0') AS month, source FROM lareferencialog where action='action' and (source_item_type='oaItem'
// or source_item_type='repItem') group by id, month, source order by source, id, month;";
String sql = "CREATE OR REPLACE VIEW la_result_views_monthly_tmp AS SELECT entity_id AS id, COUNT(entity_id) as views, SUM(CASE WHEN referrer_name LIKE '%openaire%' THEN 1 ELSE 0 END) AS openaire_referrer, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS VARCHAR), 2, '0') AS month, source FROM lareferencialogtmp where action='action' and (source_item_type='oaItem' or source_item_type='repItem') group by id, month, source order by source, id, month;";
stmt.executeUpdate(sql);
// sql = "SELECT 'OpenAIRE'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(views) AS count, max(openaire_referrer) AS openaire INTO views_stats FROM result_views_monthly p, datasource d, result_oids ro where p.source!='5' AND p.source=d.piwik_id and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;"; // sql = "SELECT 'OpenAIRE'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date,
sql = "CREATE TABLE IF NOT EXISTS la_views_stats_tmp AS SELECT 'LaReferencia'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(views) AS count, max(openaire_referrer) AS openaire FROM la_result_views_monthly_tmp p, public.datasource_oids d, public.result_oids ro where p.source=d.orid and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;"; // max(views) AS count, max(openaire_referrer) AS openaire INTO views_stats FROM result_views_monthly p,
stmt.executeUpdate(sql); // datasource d, result_oids ro where p.source!='5' AND p.source=d.piwik_id and p.id=ro.orid group by
// repository_id, result_id, date ORDER BY repository_id, result_id, date;";
sql = "CREATE TABLE IF NOT EXISTS la_views_stats_tmp AS SELECT 'LaReferencia'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(views) AS count, max(openaire_referrer) AS openaire FROM la_result_views_monthly_tmp p, public.datasource_oids d, public.result_oids ro where p.source=d.orid and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;";
stmt.executeUpdate(sql);
stmt.close(); stmt.close();
ConnectDB.getConnection().commit(); ConnectDB.getConnection().commit();
ConnectDB.getConnection().close(); ConnectDB.getConnection().close();
} }
private void downloadsStats() throws Exception { private void downloadsStats() throws Exception {
Statement stmt = ConnectDB.getConnection().createStatement(); Statement stmt = ConnectDB.getConnection().createStatement();
ConnectDB.getConnection().setAutoCommit(false); ConnectDB.getConnection().setAutoCommit(false);
//String sql = "CREATE OR REPLACE VIEW result_downloads_monthly as select entity_id AS id, COUNT(entity_id) as downloads, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS VARCHAR), 2, '0') AS month, source FROM lareferencialog where action='download' and (source_item_type='oaItem' or source_item_type='repItem') group by id, month, source order by source, id, month;"; // String sql = "CREATE OR REPLACE VIEW result_downloads_monthly as select entity_id AS id, COUNT(entity_id) as
String sql = "CREATE OR REPLACE VIEW la_result_downloads_monthly_tmp as select entity_id AS id, COUNT(entity_id) as downloads, SUM(CASE WHEN referrer_name LIKE '%openaire%' THEN 1 ELSE 0 END) AS openaire_referrer, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS VARCHAR), 2, '0') AS month, source FROM lareferencialogtmp where action='download' and (source_item_type='oaItem' or source_item_type='repItem') group by id, month, source order by source, id, month;"; // downloads, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS
stmt.executeUpdate(sql); // VARCHAR), 2, '0') AS month, source FROM lareferencialog where action='download' and
// (source_item_type='oaItem' or source_item_type='repItem') group by id, month, source order by source, id,
// month;";
String sql = "CREATE OR REPLACE VIEW la_result_downloads_monthly_tmp as select entity_id AS id, COUNT(entity_id) as downloads, SUM(CASE WHEN referrer_name LIKE '%openaire%' THEN 1 ELSE 0 END) AS openaire_referrer, extract('year' from timestamp::date) ||'/'|| LPAD(CAST(extract('month' from timestamp::date) AS VARCHAR), 2, '0') AS month, source FROM lareferencialogtmp where action='download' and (source_item_type='oaItem' or source_item_type='repItem') group by id, month, source order by source, id, month;";
stmt.executeUpdate(sql);
//sql = "SELECT 'OpenAIRE'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(downloads) AS count INTO downloads_stats FROM result_downloads_monthly p, datasource d, result_oids ro where p.source!='5' AND p.source=d.piwik_id and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;"; // sql = "SELECT 'OpenAIRE'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date,
// max(downloads) AS count INTO downloads_stats FROM result_downloads_monthly p, datasource d, result_oids ro
// where p.source!='5' AND p.source=d.piwik_id and p.id=ro.orid group by repository_id, result_id, date ORDER BY
// repository_id, result_id, date;";
// sql = "SELECT 'OpenAIRE'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(downloads) AS count, max(openaire_referrer) AS openaire INTO downloads_stats FROM result_downloads_monthly p, datasource d, result_oids ro where p.source!='5' AND p.source=d.piwik_id and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;"; // sql = "SELECT 'OpenAIRE'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(downloads) AS count, max(openaire_referrer) AS openaire INTO downloads_stats FROM result_downloads_monthly p, datasource d, result_oids ro where p.source!='5' AND p.source=d.piwik_id and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;";
sql = "CREATE TABLE IF NOT EXISTS la_downloads_stats_tmp AS SELECT 'LaReferencia'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(downloads) AS count, max(openaire_referrer) AS openaire FROM la_result_downloads_monthly_tmp p, public.datasource_oids d, public.result_oids ro where p.source=d.orid and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;"; sql = "CREATE TABLE IF NOT EXISTS la_downloads_stats_tmp AS SELECT 'LaReferencia'::TEXT as source, d.id as repository_id, ro.id as result_id, month as date, max(downloads) AS count, max(openaire_referrer) AS openaire FROM la_result_downloads_monthly_tmp p, public.datasource_oids d, public.result_oids ro where p.source=d.orid and p.id=ro.orid group by repository_id, result_id, date ORDER BY repository_id, result_id, date;";
stmt.executeUpdate(sql); stmt.executeUpdate(sql);
stmt.close(); stmt.close();
ConnectDB.getConnection().commit(); ConnectDB.getConnection().commit();
ConnectDB.getConnection().close(); ConnectDB.getConnection().close();
} }
private void updateProdTables() throws SQLException, Exception {
private void updateProdTables() throws SQLException, Exception { Statement stmt = ConnectDB.getConnection().createStatement();
ConnectDB.getConnection().setAutoCommit(false);
String sql = "insert into lareferencialog select * from lareferencialogtmp;";
stmt.executeUpdate(sql);
Statement stmt = ConnectDB.getConnection().createStatement(); sql = "insert into views_stats select * from la_views_stats_tmp;";
ConnectDB.getConnection().setAutoCommit(false); stmt.executeUpdate(sql);
String sql = "insert into lareferencialog select * from lareferencialogtmp;";
stmt.executeUpdate(sql);
sql = "insert into views_stats select * from la_views_stats_tmp;"; sql = "insert into public.views_stats select * from la_views_stats_tmp;";
stmt.executeUpdate(sql); stmt.executeUpdate(sql);
sql = "insert into public.views_stats select * from la_views_stats_tmp;"; sql = "insert into downloads_stats select * from la_downloads_stats_tmp;";
stmt.executeUpdate(sql); stmt.executeUpdate(sql);
sql = "insert into downloads_stats select * from la_downloads_stats_tmp;"; sql = "insert into public.downloads_stats select * from la_downloads_stats_tmp;";
stmt.executeUpdate(sql); stmt.executeUpdate(sql);
sql = "insert into public.downloads_stats select * from la_downloads_stats_tmp;"; stmt.close();
stmt.executeUpdate(sql); ConnectDB.getConnection().commit();
ConnectDB.getConnection().close();
stmt.close(); }
ConnectDB.getConnection().commit();
ConnectDB.getConnection().close();
} private ArrayList<String> listHdfsDir(String dir) throws Exception {
FileSystem hdfs = FileSystem.get(new Configuration());
RemoteIterator<LocatedFileStatus> Files;
ArrayList<String> fileNames = new ArrayList<>();
private ArrayList<String> listHdfsDir(String dir) throws Exception { try {
FileSystem hdfs = FileSystem.get(new Configuration()); Path exportPath = new Path(hdfs.getUri() + dir);
RemoteIterator<LocatedFileStatus> Files; Files = hdfs.listFiles(exportPath, false);
ArrayList<String> fileNames = new ArrayList<>(); while (Files.hasNext()) {
String fileName = Files.next().getPath().toString();
// log.info("Found hdfs file " + fileName);
fileNames.add(fileName);
}
// hdfs.close();
} catch (Exception e) {
log.error("HDFS file path with exported data does not exist : " + new Path(hdfs.getUri() + logRepoPath));
throw new Exception("HDFS file path with exported data does not exist : " + logRepoPath, e);
}
try { return fileNames;
Path exportPath = new Path(hdfs.getUri() + dir); }
Files = hdfs.listFiles(exportPath, false);
while (Files.hasNext()) {
String fileName = Files.next().getPath().toString();
//log.info("Found hdfs file " + fileName);
fileNames.add(fileName);
}
//hdfs.close();
} catch (Exception e) {
log.error("HDFS file path with exported data does not exist : " + new Path(hdfs.getUri() + logRepoPath));
throw new Exception("HDFS file path with exported data does not exist : " + logRepoPath, e);
}
return fileNames; private String readHDFSFile(String filename) throws Exception {
} String result;
try {
private String readHDFSFile(String filename) throws Exception { FileSystem fs = FileSystem.get(new Configuration());
String result; // log.info("reading file : " + filename);
try {
FileSystem fs = FileSystem.get(new Configuration()); BufferedReader br = new BufferedReader(new InputStreamReader(fs.open(new Path(filename))));
//log.info("reading file : " + filename);
BufferedReader br = new BufferedReader(new InputStreamReader(fs.open(new Path(filename)))); StringBuilder sb = new StringBuilder();
String line = br.readLine();
StringBuilder sb = new StringBuilder(); while (line != null) {
String line = br.readLine(); if (!line.equals("[]")) {
sb.append(line);
}
// sb.append(line);
line = br.readLine();
}
result = sb.toString().replace("][{\"idSite\"", ",{\"idSite\"");
if (result.equals("")) {
result = "[]";
}
while (line != null) { // fs.close();
if (!line.equals("[]")) { } catch (Exception e) {
sb.append(line); log.error(e);
} throw new Exception(e);
//sb.append(line); }
line = br.readLine();
}
result = sb.toString().replace("][{\"idSite\"", ",{\"idSite\"");
if (result.equals("")) {
result = "[]";
}
//fs.close(); return result;
} catch (Exception e) { }
log.error(e);
throw new Exception(e);
}
return result;
}
} }

15
dhp-workflows/dhp-usage-stats-update/src/main/java/eu/dnetlib/oa/graph/usagestats/export/UsageStatsExporter.java
View File

@ -25,7 +25,7 @@ public class UsageStatsExporter {
static String lareferenciaLogPath = "/user/spyros/logs/usage_stats_logs6/lareferencia"; static String lareferenciaLogPath = "/user/spyros/logs/usage_stats_logs6/lareferencia";
static String lareferenciaBaseURL = "http://matomo.lareferencia.info"; static String lareferenciaBaseURL = "http://matomo.lareferencia.info";
static String lareferenciaAuthToken = "484874b3655d5a831eb8db33695790c4"; static String lareferenciaAuthToken = "484874b3655d5a831eb8db33695790c4";
public UsageStatsExporter(Properties properties) { public UsageStatsExporter(Properties properties) {
this.properties = properties; this.properties = properties;
} }
@ -57,21 +57,22 @@ public class UsageStatsExporter {
// piwikstatsdb.processLogs(); // piwikstatsdb.processLogs();
log.info("process logs done"); log.info("process logs done");
// LaReferenciaDownloadLogs lrf = new LaReferenciaDownloadLogs(lareferenciaBaseURL,lareferenciaAuthToken); System.out.println("====> Creating LaReferencia tables");
// lrf.GetLaReferenciaRepos(lareferenciaLogPath); LaReferenciaDownloadLogs lrf = new LaReferenciaDownloadLogs(lareferenciaBaseURL, lareferenciaAuthToken);
lrf.GetLaReferenciaRepos(lareferenciaLogPath);
// LaReferenciaStats lastats = new LaReferenciaStats(lareferenciaLogPath); // LaReferenciaStats lastats = new LaReferenciaStats(lareferenciaLogPath);
// lastats.processLogs(); // lastats.processLogs();
// log.info("LaReferencia logs done"); // log.info("LaReferencia logs done");
IrusStats irusstats = new IrusStats(irusUKBaseURL); // IrusStats irusstats = new IrusStats(irusUKBaseURL);
// irusstats.getIrusRRReport(irusUKReportPath); // irusstats.getIrusRRReport(irusUKReportPath);
// irusstats.processIrusStats(); // irusstats.processIrusStats();
// log.info("irus done"); // log.info("irus done");
SarcStats sarcStats = new SarcStats(); // SarcStats sarcStats = new SarcStats();
// sarcStats.getAndProcessSarc(sarcsReportPathArray, sarcsReportPathNonArray); // sarcStats.getAndProcessSarc(sarcsReportPathArray, sarcsReportPathNonArray);
sarcStats.finalizeSarcStats(); // sarcStats.finalizeSarcStats();
// log.info("sarc done"); // log.info("sarc done");
// // finalize usagestats // // finalize usagestats