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336 Commits

Author SHA1 Message Date
dimitrispie a94a54a2d0 Changes for tables and creation of the new indicator indi_is_result_accessible 
- Drop table statements for all tables to avoid duplicates in case of wf rerun
- Add pdfsaggregated step to create the indi_is_result_accessible table. This step is executed on the new impala cluster only, since the pdfaggregation_i is updated on this cluster.
 2023-11-15 14:32:18 +02:00
Claudio Atzori 4e6fccf4f6 Merge pull request 'Beta stats wf updated' (#332) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#332
 2023-10-10 09:35:32 +02:00
dimitrispie 17586f0ff8 Update step20-createMonitorDB.sql 
Add result_orcid table to monitor dbs
 2023-10-09 14:21:31 +03:00
dimitrispie 489a082f04 Update step16-createIndicatorsTables.sql 
Change scripts for gold, hybrid, bronze indicators
 2023-10-09 14:00:50 +03:00
dimitrispie 9ef971a146 Update step16-createIndicatorsTables.sql 
Fix int year for:
indi_org_openess_year
indi_org_fairness_year
indi_org_findable_year
 2023-09-19 14:25:42 +03:00
dimitrispie 5f90cc11e9 Update step16-createIndicatorsTables.sql 
Fix indi_pub_bronze_oa
 2023-09-06 14:14:38 +03:00
dimitrispie 964c2f553e Changes in indicators step, monitor step 
- graduatedoctorates for observatory
- result_apc_affiliations table
- new indicators
	indi_is_funder_plan_s
	indi_funder_fairness
	indi_ris_fairness
	indi_funder_openess
	indi_ris_openess
	indi_funder_findable
	indi_ris_findable
	indi_is_project_result_after
- cast year to int in composite indicators
- new institutions
     -- Universidade Católica Portuguesa
     -- Iscte - Instituto Universitário de Lisboa
     -- Munster Technological University
     -- Cardiff University
     -- Leibniz Institute of Ecological Urban and Regional Development
 2023-09-01 10:57:02 +03:00
Giambattista Bloisi bb5b845e3c Use scala.binary.version property to resolve scala maven dependencies 
Ensure consistent usage of maven properties
Profile for compiling with scala 2.12 and Spark 3.4
 2023-07-24 11:13:48 +02:00
dimitrispie be4856ef35 Update step15.sql 2023-07-17 15:33:58 +03:00
dimitrispie 163b2ee2a8 Changes 
1. Monitor updates
2. Bug fixes during copy to impala cluster
 2023-07-13 15:25:00 +03:00
Claudio Atzori b0ebf56367 Merge pull request 'Update step15_5.sql' (#314) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#314
 2023-06-21 10:33:22 +02:00
dimitrispie 2b6370eaee Update step15_5.sql 
Bug fix
 2023-06-21 11:31:10 +03:00
Claudio Atzori 35e42a86ed Merge pull request 'Update step15_5.sql' (#313) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#313
 2023-06-21 10:26:16 +02:00
dimitrispie 74cb060bfe Update step15_5.sql 
Add "if not exists" clause
 2023-06-21 11:24:06 +03:00
Claudio Atzori 85e016df17 Merge pull request 'Update step16-createIndicatorsTables.sql' (#312) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#312
 2023-06-21 09:52:33 +02:00
dimitrispie a475cfcb7b Update step16-createIndicatorsTables.sql 
Rename a field in indi_pub_interdisciplinarity
 2023-06-21 10:42:02 +03:00
Claudio Atzori 979cf9cd87 Merge pull request 'Update step15.sql' (#311) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#311
 2023-06-21 09:20:01 +02:00
dimitrispie 4648cd88d4 Update step15.sql 
Cast score to double
 2023-06-21 10:02:19 +03:00
dimitrispie 94d2573c77 Update step15.sql 
Bug Fix
 2023-06-21 09:22:39 +03:00
Claudio Atzori 0561362de2 Merge pull request 'Update step20-createMonitorDB_institutions.sql' (#309) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#309
 2023-06-20 15:07:09 +02:00
dimitrispie be2caedb04 Update step20-createMonitorDB_institutions.sql 
Add openorgs____::1624ff7c01bb641b91f4518539a0c28a Vrije Universiteit Amsterdam
 2023-06-19 12:12:17 +03:00
dimitrispie 4c770a5e29 Update finalizeImpalaCluster.sh 
Drop views in shadow dbs before dropping the db
 2023-06-15 13:25:37 +03:00
dimitrispie e06d962a6a Update step15.sql 2023-06-15 12:20:35 +03:00
dimitrispie afcad08396 Update step20-createMonitorDB_institutions.sql 
Added openorgs____::c0b262bd6eab819e4c994914f9c010e2   -- National Institute of Geophysics and Volcanology
 2023-06-15 10:28:49 +03:00
Claudio Atzori b9748763e2 Merge pull request '[stats wf] Bug fixes' (#308) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#308
 2023-06-14 21:57:03 +02:00
dimitrispie 42b8ce2ba4 Update copyDataToImpalaCluster.sh 2023-06-14 19:23:42 +03:00
dimitrispie 2032b0df40 Bug fixes 
1. Remove tables/views from old databases in the new cluster, before dropping the dbs
2. Fix id in result_accessroute, indi_impact_measures, indi_pub_bronze_oa
 2023-06-14 19:09:09 +03:00
Claudio Atzori da7b66c542 Merge pull request '[stats wf] Added memory to hive' (#305) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#305
 2023-06-08 08:58:48 +02:00
dimitrispie c5f42c7f5b Added memory to hive 2023-06-07 18:18:23 +03:00
Claudio Atzori afb76ebf0f Merge pull request '[stats wf] Bug fix on indicators step' (#304) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#304
 2023-06-07 16:49:09 +02:00
dimitrispie fa24e2e18f Bug fix on indicators step 
indi_pub_gold_oa table was missing during the creation of other indicators
 2023-06-07 17:43:37 +03:00
Claudio Atzori 01c67e697d Merge pull request '[ stats wf] Bug fix' (#303) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#303
 2023-06-07 14:41:44 +02:00
dimitrispie 28272c1b0e Bug fix 2023-06-07 15:34:01 +03:00
Claudio Atzori 8f651f1225 Merge pull request 'Changes to beta stats wf' (#300) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#300
 2023-06-06 11:41:36 +02:00
dimitrispie ad07fbf053 Add names to organizations for collaboration indicators 2023-06-02 14:13:10 +03:00
dimitrispie 2324670714 Split Monitor DBs-Interdisciplinarity indicators 
- Split DBs Monitor for faster rendering of visualizations
- Add interdisciplinarity indicators from result_fos
 2023-06-02 13:34:16 +03:00
dimitrispie ebe586b1d1 Impact indicators/Unpaywall 
- Added Impact indicators
- Added unpaywall open access colours
 2023-05-26 10:25:28 +03:00
dimitrispie d6102dd576 Update step16-createIndicatorsTables.sql 
- Add org names to indi_project_collab_org
- Add indi_pub_bronze_oa
 - Changes to indi_pub_hybrid_oa_with_cc
 2023-05-25 14:52:34 +03:00
Claudio Atzori a235d2a24a Merge pull request 'Updates to steps related to transfer data to impala cluster' (#295) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#295
 2023-05-18 08:46:15 +02:00
dimitrispie 86f4f63daf Updates to steps related to transfer data to impala cluster 
1. Remove external table definitions in stats_ext
2. Fix the issue where some views are not created.
3. Added two workflow parameters for copying also the usage stats dbs
 2023-05-18 09:33:05 +03:00
Claudio Atzori 0c314d5e09 Merge pull request 'Update copyDataToImpalaCluster.sh' (#293) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#293
 2023-05-15 12:05:54 +02:00
dimitrispie b3f9633205 Update copyDataToImpalaCluster.sh 
Added option --user to impala-shell command
 2023-05-15 12:51:44 +03:00
Miriam Baglioni 12cd179d2d Merge pull request 'Update copyDataToImpalaCluster.sh' (#291) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#291
 2023-05-12 11:36:34 +02:00
dimitrispie 00d0d162b6 Update copyDataToImpalaCluster.sh 
Added a temporary folder to copy the files to avoid permission issues
 2023-05-12 12:31:13 +03:00
Claudio Atzori 0704e186f6 Merge pull request 'Stats wf executed on hive only' (#283) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#283
 2023-05-02 14:05:12 +02:00
dimitrispie c3d58e58e1 Bug fixes 2023-05-02 11:54:07 +03:00
dimitrispie e57ecdaf98 Update step20-createMonitorDB.sql 
Add University of Manitoba
 2023-04-30 17:52:23 +03:00
dimitrispie 5247cb7115 Bug fix 2023-04-19 11:11:19 +03:00
dimitrispie 25dafccc24 Merge branch 'hive' into beta 2023-04-12 11:36:59 +03:00
dimitrispie c85de8fa1f -Added Technological University Dublin 
-Added project_organization_contribution table
-Add   Delft University of Technology
 2023-04-07 09:22:59 +03:00
dimitrispie 9b41dff33c Update step20-createMonitorDB.sql 
Added Delft University of Technology
 2023-04-07 09:21:38 +03:00
dimitrispie 91e18ac7f4 Added project_organization_contribution table 2023-04-06 10:53:11 +03:00
dimitrispie 9e1335df4c -Added Technological University Dublin 
-Added project_organization_contribution table
 2023-04-04 13:22:40 +03:00
dimitrispie fad7fa4af8 Added Technological University Dublin 2023-03-22 09:44:00 +02:00
dimitrispie 43b23a9bf3 Update step20-createMonitorDB.sql 
Added Technological University Dublin
 2023-03-15 09:57:12 +02:00
dimitrispie 1547611246 Merge branch 'beta' into hive 2023-02-22 16:57:12 +02:00
Claudio Atzori c20c1c9159 Merge pull request 'Added 4 institutions:' (#261) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#261
 2023-02-22 09:53:45 +01:00
dimitrispie 032a401cbf Bug fixes 2023-02-20 09:29:20 +02:00
dimitrispie 595192d510 Bug fix 2023-02-14 16:24:08 +02:00
dimitrispie f3aaff3688 Remove duplicate orgs 2023-02-14 09:48:36 +02:00
dimitrispie 3400133c2f Bug fix 2023-02-13 09:44:00 +02:00
dimitrispie 935db0ab25 Added organizations for Monitor 2023-02-13 09:29:09 +02:00
dimitrispie 7b78b15c81 Changes for copying to Impala Cluster 2023-02-13 09:27:00 +02:00
dimitrispie d71f5672d3 Add monitor post step 2023-02-09 13:44:14 +02:00
dimitrispie 35ba8bb328 Bug fixes 2023-02-09 12:57:57 +02:00
dimitrispie 3ba11d64a1 Changes 07022023 2023-02-07 12:53:51 +02:00
dimitrispie 98c34263ed Update step20-createMonitorDB.sql 
Add University of Cape Town organization
 2023-02-07 08:14:48 +02:00
dimitrispie 2dc6d47270 Changes 06022023 2023-02-06 13:18:53 +02:00
dimitrispie 973d78a4d6 Update step15_5.sql 
Added unpaywalls open access colors
 2023-02-02 08:03:54 +02:00
dimitrispie cf58e4a5e4 Added Arts et Métiers ParisTech 2023-01-25 16:03:16 +02:00
dimitrispie db7d625ba9 Addedd Arts et Métiers ParisTech organization 2023-01-25 12:22:21 +02:00
dimitrispie 686580a220 - New Monitor DB workflow 
- New Organization added
 2023-01-12 11:18:03 +02:00
dimitrispie dcb958e146 Changes to execute the stats wf only in hive 2023-01-04 11:39:01 +02:00
dimitrispie 592013d5dd Added more steps in decision node 2022-12-23 09:43:16 +02:00
dimitrispie 2a4bf32d4c Merge branch 'hive' of https://code-repo.d4science.org/antonis.lempesis/dnet-hadoop into hive 
# Conflicts:
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step10.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step13.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step14.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_1-definitions.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step7.sql
 2022-12-22 10:22:46 +02:00
dimitrispie 6449ff4207 1. Added a decision node to enables the workflow to make a selection on the execution path to follow 
2. Added new organization
3. Added 5 new tables from Eurostast
 2022-12-22 10:18:21 +02:00
Antonis Lempesis c8309fe18e addded command line params to allow hive actions to run 2022-12-21 12:41:33 +02:00
Antonis Lempesis 028873cc51 added new hive opts 2022-12-21 12:41:33 +02:00
Antonis Lempesis 1ddea4f442 removed 'stored as parquet' from views.. 2022-12-21 12:41:33 +02:00
Antonis Lempesis 2754c3dd62 moving data to impala cluster and creating shadow databases there 2022-12-21 12:41:29 +02:00
Antonis Lempesis 778a1a724f finished migration to hive only 2022-12-21 12:41:25 +02:00
Antonis Lempesis e84dd5fe26 first 2022-12-21 12:41:23 +02:00
dimitrispie 2a52a42169 Added 4 institutions: 
-University of Modena and Reggio Emilia
-Bilkent University
-Saints Cyril and Methodius University of Skopje
-University of Milan
 2022-12-06 10:10:21 +02:00
Claudio Atzori ddf065756f Merge pull request 'Two organizations are added for monitor' (#258) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#258
 2022-12-02 14:45:27 +01:00
dimitrispie 992fc5b628 Added McMaster University Institution 2022-11-03 11:02:18 +02:00
dimitrispie 7fda05e380 Added Autonomous University of Barcelona 2022-11-01 13:59:40 +02:00
Claudio Atzori 22873c9172 Merge pull request 'Added fields: totalcost, fundedamount, currency, in project table' (#257) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#257
 2022-10-31 13:49:27 +01:00
dimitrispie 7861c472e0 Hive memory parameters 2022-10-28 19:00:32 +03:00
dimitrispie 5df9c63963 Added fields: totalcost, fundedamount, currency, in project table 2022-10-27 16:44:26 +03:00
Claudio Atzori 89f7007080 Merge pull request '[stats wf] misc changes' (#254) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#254
 2022-10-03 10:32:05 +02:00
dimitrispie 2c0c3f1806 Cast amount to float for table result_apcs 2022-09-28 19:33:24 +03:00
dimitrispie bdc46e3eaa Remove denormalization of results to fix downloads numbers in monitor 2022-09-28 14:59:08 +03:00
dimitrispie 2ebb1459a9 Fixed type in no_downloads 2022-09-28 14:36:57 +03:00
Claudio Atzori 3b60642ef9 Merge pull request 'Synchronize indicators in stats-db with monitor-db' (#249) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#249
 2022-09-27 14:37:33 +02:00
dimitrispie dcd85f8cd7 - Synchronize indicators in stats-db with monitor-db 
- added new openorg id for Nanyang Technological University
- changed openorg id for University of Helsinki #8088 ticket
 2022-09-22 13:33:07 +03:00
Claudio Atzori 465e941214 Merge pull request '[stats wf] Changes to indicators tables' (#244) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#244
 2022-09-16 10:13:58 +02:00
dimitrispie 3bf3127251 Changes to monitor and indicator scripts 2022-09-14 16:36:19 +03:00
dimitrispie 71b069ca90 Changes to indicator and monitor scripts 2022-09-09 13:15:58 +03:00
dimitrispie 2b5f8c9c9a comment out duplicate table creation 2022-09-06 12:27:53 +03:00
Claudio Atzori 84598c7535 Merge pull request 'restored some collab indicators' (#240) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#240
 2022-08-05 15:50:39 +02:00