Miriam Baglioni
8442efd8d1
[Graph DUMP] Filtering out from the originalIds the id of the result in OpenAIRE
2021-11-05 12:29:22 +01:00
Claudio Atzori
5681e89544
Update 'dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump/schemas/result_schema.json'
2021-11-05 12:18:24 +01:00
Miriam Baglioni
a22c29fba1
[Graph DUMP] Filtering out from the originalIds the id of the result in OpenAIRE
2021-11-05 12:08:33 +01:00
Miriam Baglioni
c10ff6928c
[Graph DUMP] add schema of the dump related to the model as in dhp-schemas.2.8.31. Note the measere element at the level of the result has been removed because of issues on where to display it: at the level of the result or at the level of the entity
2021-11-05 11:36:21 +01:00
Miriam Baglioni
0857849a86
[Graph DUMP] Remove dump of measure until it will be clear where to put it (at the level of result or at the level of the instance)
2021-11-05 11:02:37 +01:00
Miriam Baglioni
df7ee77c7a
[DOIBoost Mapping] removed not needed comments
2021-11-04 16:24:07 +01:00
Miriam Baglioni
de63d29b6f
[DOIBoost Mapping] Fix to avoid to produce results with null as identifier (probably due to the filtering function in the factory for the creation of the id)
2021-11-04 16:16:40 +01:00
Miriam Baglioni
d50057b2d9
[DOIBoost Mapping] changed the way to create the url for the instance: we use the crooref guidelines https://doi.org/doi
2021-11-03 16:59:37 +01:00
Miriam Baglioni
edf55395e9
added test resourse
2021-11-03 16:49:30 +01:00
Miriam Baglioni
d97ea82a29
[DOIBoost Mapping] Added test to verify the instance created for Crossref will have just the url related to the doi
2021-11-03 16:45:15 +01:00
Miriam Baglioni
96769b4481
[DOIBoost - Mapping] Changed the logic which brought in in the instance urls that should not be there: The urld of the doi in the json is reachable from the root (json/"URL") other urls where added from the links element. Now the mapping from the link element has been removed
2021-11-03 16:43:36 +01:00
Miriam Baglioni
683fe093cf
[DOIBoost - Mapping] Remove the addition of the instance to the MAG publication record
2021-11-03 15:51:26 +01:00
Miriam Baglioni
b2bb8d9d79
[DOIBoost - Mapping] selecting the url from Crossref containing the doi
2021-11-03 15:44:57 +01:00
Miriam Baglioni
779318961c
[DOIBoost - Mapping] removed the url from crossref containing the api.elsevier.com... string in the url
2021-11-03 14:38:52 +01:00
Miriam Baglioni
2480e590d1
[DOIBoost - Mapping] changed the type on which to map dissertation from Crossref: from 006 Doctoral thesis to 0044 Thesis since dissertation could be either Doctoral or master thesis
2021-11-03 14:25:23 +01:00
Sandro La Bruzzo
7bd224f051
implement first version of scholexplorer integration for the generation of final graph
2021-11-02 15:58:15 +01:00
Claudio Atzori
7fa49f6956
Merge pull request 'removed hardcoded reference' ( #154 ) from antonis.lempesis/dnet-hadoop:beta into beta
...
Reviewed-on: D-Net/dnet-hadoop#154
2021-11-02 09:11:30 +01:00
Antonis Lempesis
f78afb5ef9
removed hardcoded reference
2021-11-01 15:42:29 +02:00
Claudio Atzori
1225ba0b92
[resolution] increasing number of partitions to avoid OOM
2021-10-28 16:18:17 +02:00
Sandro La Bruzzo
d9cbca83f7
moved filter on next phase
2021-10-28 16:13:24 +02:00
Sandro La Bruzzo
1be9aa0a5f
Removed filter of datacite items from the raw graph merging phase, Datacite is not an actionset anymore in beta
2021-10-26 17:52:20 +02:00
Sandro La Bruzzo
4acfa8fa2e
Scholexplorer Datasource Aggregation:
...
- Added collectedfrom in the inverse relation generated
Relation resolution:
- increased number of partitions in workflow.xml
- using classid instead of classname to build the pid-dnetId mapping
2021-10-26 17:51:20 +02:00
Sandro La Bruzzo
034304b33a
conflict resolved on merge
2021-10-26 09:40:47 +02:00
Claudio Atzori
d147295c2f
avoiding java.io.NotSerializableException: java.util.HashMap
2021-10-21 14:15:57 +02:00
Claudio Atzori
3702fe478d
cleanup
2021-10-21 12:05:02 +02:00
Sandro La Bruzzo
ac36aa7d1c
fixed wrong Encoding during a map phase
2021-10-21 11:35:02 +02:00
Sandro La Bruzzo
aeeebd573b
code refactor renamed datacite package
2021-10-20 17:37:42 +02:00
Sandro La Bruzzo
ab3a99d3e9
removed old datacite oozie workflow
2021-10-20 17:19:47 +02:00
Sandro La Bruzzo
ae4e99a471
Adapted workflow of resolution of PID to work into OpenAIRE data workflow
...
- Added relations in both verse on all Scholexplorer datasources
2021-10-20 17:12:16 +02:00
Claudio Atzori
4f8970f8ed
[stats] reducing the step22 wait time
2021-10-20 14:14:53 +02:00
Claudio Atzori
00b78b9c58
cleanup: mapping contents in the graph already defined in the OAF graph model doesn't require to be aware of the vocabularies
2021-10-20 14:04:45 +02:00
Claudio Atzori
c01dd0c925
registered oaf model classes for the KryoSerializer
2021-10-20 13:55:07 +02:00
Claudio Atzori
59f76b50d4
Merge branch 'beta' into hierarchical_orgs_relations
2021-10-20 09:42:35 +02:00
Antonis Lempesis
241dcf6df1
Merge branch 'beta' into beta
2021-10-19 23:54:21 +02:00
Claudio Atzori
515e068a78
Merge branch 'beta' into hierarchical_orgs_relations
2021-10-19 16:46:06 +02:00
Claudio Atzori
512e7b0170
code formatting
2021-10-19 16:19:29 +02:00
Claudio Atzori
e9157c67aa
Merge branch 'beta' into dump
2021-10-19 16:15:03 +02:00
Claudio Atzori
98f37c8d81
WIP: worflow nodes for including Scholexplorer records in the RAW graph
2021-10-19 16:14:40 +02:00
Claudio Atzori
c8850456e9
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2021-10-19 16:09:54 +02:00
Sandro La Bruzzo
c9870c5122
code formatted
2021-10-19 15:24:59 +02:00
Sandro La Bruzzo
f8329bc110
since dhp-schemas changed, introducing new Relation inverse model, this class has been updated
2021-10-19 15:24:22 +02:00
Claudio Atzori
7a73010acd
WIP: worflow nodes for including Scholexplorer records in the RAW graph
2021-10-19 11:59:16 +02:00
Miriam Baglioni
c7f6cd2591
added again the setting for saXReader
2021-10-19 10:15:26 +02:00
miconis
5f780a6ba1
bug fix in migrate entities: parameter name was wrong
2021-10-18 23:30:40 +02:00
Miriam Baglioni
1315952702
merge with branch beta
2021-10-18 14:17:09 +02:00
Miriam Baglioni
1cc09adfaa
Opencitations: chenaged the test class to mirror the creation or not of duplicate dois for .refs oc original plus added optional parameter to duplicate the relation
2021-10-18 14:11:27 +02:00
Miriam Baglioni
76d41602be
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2021-10-18 10:53:22 +02:00
Miriam Baglioni
46f82c7c8f
removed not needed folder deletion
2021-10-18 10:53:16 +02:00
Sandro La Bruzzo
7b15b88d4c
renamed wrong package, implemented last aggregation workflow for scholexplorer
2021-10-15 15:00:15 +02:00
Antonis Lempesis
41ecb1eb61
invalidating medatadata before context thingies
2021-10-15 13:42:55 +03:00
Antonis Lempesis
4b7c8dff2d
fetching affiliated results for 4 orgs in monitor. fixed affiliated orgs in stats db
2021-10-14 18:53:35 +03:00
Sandro La Bruzzo
51a03c0a50
refactor code for EBI from dhp-graph-mapper into dhp-aggregation
2021-10-14 14:23:13 +02:00
Claudio Atzori
14fbf92ad6
Merge branch 'beta' into beta_solr_config
2021-10-14 11:08:44 +02:00
Claudio Atzori
b292e4a700
[stats wf] added extra logging in the context data retrieval phase
2021-10-13 17:31:53 +02:00
miconis
995c1eddaf
minor change
2021-10-13 17:07:10 +02:00
Miriam Baglioni
5d9cc2452d
changed the working path parameter value as dependant from the dnet-workflow working dir parameter
2021-10-13 15:33:50 +02:00
miconis
326bf63775
integration of parent child orgs relations
2021-10-13 12:24:48 +02:00
Miriam Baglioni
16b28494a9
added new parameter in the doiboost process workflow to specify a folder for the process of MAG dataset
2021-10-13 11:34:24 +02:00
Miriam Baglioni
63933808d4
added fix for mixing result types, added configuration default to funder subworkflow
2021-10-13 11:28:28 +02:00
Sandro La Bruzzo
7387416e90
added params skip update to direct transform in OAF, this should be set to true in production
2021-10-12 12:36:30 +02:00
Sandro La Bruzzo
511da98d0c
- fixed bug on download pmc Article
...
- removed unused line of code in SparkCreateActionset
2021-10-12 11:47:49 +02:00
Miriam Baglioni
fec40bdd95
merging with branch beta - resolved conflicts
2021-10-12 09:16:36 +02:00
Miriam Baglioni
83f51f1812
refactoring
2021-10-12 09:14:43 +02:00
Sandro La Bruzzo
5606014b17
code refactor see ticket #7065
2021-10-12 08:11:53 +02:00
Serafeim Chatzopoulos
201ce71cc1
Add resultsubject, relprojectname and resultacceptanceyear to __all field
2021-10-11 13:16:39 +03:00
Serafeim Chatzopoulos
e468a7b96b
Add tests to query Solr with different configurations
2021-10-08 16:58:51 +03:00
Serafeim Chatzopoulos
de81007302
Add exploreTestConfig, a new Solr configuration folder
2021-10-08 16:54:56 +03:00
Sandro La Bruzzo
8f99d2af86
Make the node of doiBoost to point to the correct OpenAire Organization in relations
2021-10-08 08:35:12 +02:00
Alessia Bardi
c48c43fa9e
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2021-10-07 17:30:53 +02:00
Alessia Bardi
8d3b60f446
test for patching records for EOSC Future
2021-10-07 17:30:45 +02:00
miconis
611ca511db
set configuration property in openorgs duplicates wf
2021-10-07 15:39:55 +02:00
miconis
9646b9fd98
implementation of the http call for the update of openorgs suggestions
2021-10-07 11:29:11 +02:00
Sandro La Bruzzo
2557bb41f5
Implemented new method for update baseline inside scala node
2021-10-06 16:41:08 +02:00
Sandro La Bruzzo
b84e0cabeb
Implemented new method for update baseline
2021-10-05 16:34:47 +02:00
Sandro La Bruzzo
f258bbb927
Merge branch 'beta' of code-repo.d4science.org:D-Net/dnet-hadoop into beta
2021-10-05 10:21:50 +02:00
Sandro La Bruzzo
991b06bd0b
removed generation of EBI links from old dump, now EBI link dump is created by another wf
2021-10-05 10:21:33 +02:00
Claudio Atzori
cb7efe12ac
Merge pull request 'beta' ( #146 ) from antonis.lempesis/dnet-hadoop:beta into beta
...
Reviewed-on: D-Net/dnet-hadoop#146
2021-10-05 10:09:37 +02:00
Miriam Baglioni
e653756e3d
applied some suggestiond from Sonar Lint
2021-10-04 18:40:07 +02:00
dimitrispie
3f25d2efb2
Merge branch 'beta' of https://code-repo.d4science.org/antonis.lempesis/dnet-hadoop into beta
2021-10-01 16:03:48 +03:00
dimitrispie
13687fd887
Sprint 3 indicators update
2021-10-01 16:02:02 +03:00
Miriam Baglioni
9814c3e700
mergin with branch beta
2021-10-01 13:00:03 +02:00
Miriam Baglioni
c4ccd7b32c
-
2021-10-01 12:59:47 +02:00
Miriam Baglioni
c8321ad31a
merge with branch beta
2021-10-01 12:59:08 +02:00
Claudio Atzori
60a6a9a583
[graph2hive] added field 'measures' to the result view
2021-09-30 09:27:26 +02:00
Sandro La Bruzzo
66702b1973
Added node to update datacite
2021-09-28 08:59:06 +02:00
Sandro La Bruzzo
477cb10715
Merge remote-tracking branch 'origin/beta' into beta
2021-09-27 16:57:23 +02:00
Sandro La Bruzzo
be79d74e3d
Fixed DoiBoost generation to point to correct organization in affiliation relation
2021-09-27 16:57:04 +02:00
Claudio Atzori
474117c2e8
Merge branch 'beta' into dedup_whitelist
2021-09-27 16:41:25 +02:00
Miriam Baglioni
476a4708d6
mergin with branch beta
2021-09-27 16:02:32 +02:00
Miriam Baglioni
5ec69889db
OpenCitations: creation of AS from OC
2021-09-27 16:02:06 +02:00
Claudio Atzori
a53acfbc06
Merge pull request '[stats] updates in the mapping, indicators, wf' ( #145 ) from antonis.lempesis/dnet-hadoop:beta into beta
...
Reviewed-on: D-Net/dnet-hadoop#145
2021-09-27 15:59:54 +02:00
Alessia Bardi
b924276e18
tests to generate records for the EOSC-Future demo with the EOSC Jupyter Notebbok subject
2021-09-24 17:11:56 +02:00
Antonis Lempesis
a1e1cf32d7
fixed an impala error
2021-09-24 12:57:24 +03:00
Antonis Lempesis
f358cabb2b
fixed typo
2021-09-22 21:50:37 +03:00
Miriam Baglioni
eedf7c3310
mergin with branch beta
2021-09-22 15:18:34 +02:00
Miriam Baglioni
f2118d771a
first steps in the implementation of the integration of opencitations
2021-09-22 15:18:05 +02:00
Claudio Atzori
7fa60e166e
Merge branch 'beta' into dedup_whitelist
2021-09-22 11:31:18 +02:00
Antonis Lempesis
421d55265d
created hive action for observatory queries
2021-09-21 03:07:58 +03:00
Enrico Ottonello
92a63f78fe
multiple download attempts handling if a connection to orcid server fails
2021-09-20 18:25:00 +02:00
Enrico Ottonello
0c74f5667e
Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta
2021-09-20 18:12:31 +02:00