forked from D-Net/dnet-hadoop
EOSC Services - ongoing update
This commit is contained in:
parent
5ffc24d1ba
commit
f5f532d134
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@ -3,6 +3,8 @@ package eu.dnetlib.dhp.schema.oaf.utils;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.*;
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import java.sql.Array;
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import java.sql.SQLException;
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import java.util.*;
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import java.util.concurrent.ConcurrentHashMap;
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import java.util.function.Function;
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@ -118,6 +120,17 @@ public class OafMapperUtils {
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.collect(Collectors.toList());
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}
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public static <T> List<T> listValues(Array values) throws SQLException {
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if (Objects.isNull(values)) {
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return null;
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}
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return Arrays
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.stream((T[]) values.getArray())
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.filter(Objects::nonNull)
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.distinct()
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.collect(Collectors.toList());
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}
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public static List<Field<String>> listFields(final DataInfo info, final List<String> values) {
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return values
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.stream()
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@ -44,105 +44,104 @@ class OafMapperUtilsTest {
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@Test
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void testDateValidation() {
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assertTrue(GraphCleaningFunctions.doCleanDate("2016-05-07T12:41:19.202Z ").isPresent());
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assertTrue(GraphCleaningFunctions.doCleanDate("2020-09-10 11:08:52 ").isPresent());
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assertTrue(GraphCleaningFunctions.doCleanDate(" 2016-04-05").isPresent());
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assertNotNull(GraphCleaningFunctions.cleanDate("2016-05-07T12:41:19.202Z "));
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assertNotNull(GraphCleaningFunctions.cleanDate("2020-09-10 11:08:52 "));
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assertNotNull(GraphCleaningFunctions.cleanDate(" 2016-04-05"));
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assertEquals("2016-04-05", GraphCleaningFunctions.doCleanDate("2016 Apr 05").get());
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assertEquals("2016-04-05", GraphCleaningFunctions.cleanDate("2016 Apr 05"));
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assertEquals("2009-05-08", GraphCleaningFunctions.doCleanDate("May 8, 2009 5:57:51 PM").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("oct 7, 1970").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("oct 7, '70").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("oct. 7, 1970").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("oct. 7, 70").get());
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assertEquals("2006-01-02", GraphCleaningFunctions.doCleanDate("Mon Jan 2 15:04:05 2006").get());
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assertEquals("2006-01-02", GraphCleaningFunctions.doCleanDate("Mon Jan 2 15:04:05 MST 2006").get());
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assertEquals("2006-01-02", GraphCleaningFunctions.doCleanDate("Mon Jan 02 15:04:05 -0700 2006").get());
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assertEquals("2006-01-02", GraphCleaningFunctions.doCleanDate("Monday, 02-Jan-06 15:04:05 MST").get());
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assertEquals("2006-01-02", GraphCleaningFunctions.doCleanDate("Mon, 02 Jan 2006 15:04:05 MST").get());
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assertEquals("2017-07-11", GraphCleaningFunctions.doCleanDate("Tue, 11 Jul 2017 16:28:13 +0200 (CEST)").get());
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assertEquals("2006-01-02", GraphCleaningFunctions.doCleanDate("Mon, 02 Jan 2006 15:04:05 -0700").get());
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assertEquals("2018-01-04", GraphCleaningFunctions.doCleanDate("Thu, 4 Jan 2018 17:53:36 +0000").get());
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assertEquals("2015-08-10", GraphCleaningFunctions.doCleanDate("Mon Aug 10 15:44:11 UTC+0100 2015").get());
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assertEquals("2009-05-08", GraphCleaningFunctions.cleanDate("May 8, 2009 5:57:51 PM"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("oct 7, 1970"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("oct 7, '70"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("oct. 7, 1970"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("oct. 7, 70"));
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assertEquals("2006-01-02", GraphCleaningFunctions.cleanDate("Mon Jan 2 15:04:05 2006"));
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assertEquals("2006-01-02", GraphCleaningFunctions.cleanDate("Mon Jan 2 15:04:05 MST 2006"));
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assertEquals("2006-01-02", GraphCleaningFunctions.cleanDate("Mon Jan 02 15:04:05 -0700 2006"));
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assertEquals("2006-01-02", GraphCleaningFunctions.cleanDate("Monday, 02-Jan-06 15:04:05 MST"));
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assertEquals("2006-01-02", GraphCleaningFunctions.cleanDate("Mon, 02 Jan 2006 15:04:05 MST"));
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assertEquals("2017-07-11", GraphCleaningFunctions.cleanDate("Tue, 11 Jul 2017 16:28:13 +0200 (CEST)"));
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assertEquals("2006-01-02", GraphCleaningFunctions.cleanDate("Mon, 02 Jan 2006 15:04:05 -0700"));
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assertEquals("2018-01-04", GraphCleaningFunctions.cleanDate("Thu, 4 Jan 2018 17:53:36 +0000"));
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assertEquals("2015-08-10", GraphCleaningFunctions.cleanDate("Mon Aug 10 15:44:11 UTC+0100 2015"));
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assertEquals(
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"2015-07-03",
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GraphCleaningFunctions.doCleanDate("Fri Jul 03 2015 18:04:07 GMT+0100 (GMT Daylight Time)").get());
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assertEquals("2012-09-17", GraphCleaningFunctions.doCleanDate("September 17, 2012 10:09am").get());
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assertEquals("2012-09-17", GraphCleaningFunctions.doCleanDate("September 17, 2012 at 10:09am PST-08").get());
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assertEquals("2012-09-17", GraphCleaningFunctions.doCleanDate("September 17, 2012, 10:10:09").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("October 7, 1970").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("October 7th, 1970").get());
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assertEquals("2006-02-12", GraphCleaningFunctions.doCleanDate("12 Feb 2006, 19:17").get());
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assertEquals("2006-02-12", GraphCleaningFunctions.doCleanDate("12 Feb 2006 19:17").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("7 oct 70").get());
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assertEquals("1970-10-07", GraphCleaningFunctions.doCleanDate("7 oct 1970").get());
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assertEquals("2013-02-03", GraphCleaningFunctions.doCleanDate("03 February 2013").get());
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assertEquals("2013-07-01", GraphCleaningFunctions.doCleanDate("1 July 2013").get());
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assertEquals("2013-02-03", GraphCleaningFunctions.doCleanDate("2013-Feb-03").get());
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assertEquals("2014-03-31", GraphCleaningFunctions.doCleanDate("3/31/2014").get());
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assertEquals("2014-03-31", GraphCleaningFunctions.doCleanDate("03/31/2014").get());
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assertEquals("1971-08-21", GraphCleaningFunctions.doCleanDate("08/21/71").get());
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assertEquals("1971-01-08", GraphCleaningFunctions.doCleanDate("8/1/71").get());
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assertEquals("2014-08-04", GraphCleaningFunctions.doCleanDate("4/8/2014 22:05").get());
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assertEquals("2014-08-04", GraphCleaningFunctions.doCleanDate("04/08/2014 22:05").get());
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assertEquals("2014-08-04", GraphCleaningFunctions.doCleanDate("4/8/14 22:05").get());
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assertEquals("2014-02-04", GraphCleaningFunctions.doCleanDate("04/2/2014 03:00:51").get());
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assertEquals("1965-08-08", GraphCleaningFunctions.doCleanDate("8/8/1965 12:00:00 AM").get());
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assertEquals("1965-08-08", GraphCleaningFunctions.doCleanDate("8/8/1965 01:00:01 PM").get());
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assertEquals("1965-08-08", GraphCleaningFunctions.doCleanDate("8/8/1965 01:00 PM").get());
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assertEquals("1965-08-08", GraphCleaningFunctions.doCleanDate("8/8/1965 1:00 PM").get());
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assertEquals("1965-08-08", GraphCleaningFunctions.doCleanDate("8/8/1965 12:00 AM").get());
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assertEquals("2014-02-04", GraphCleaningFunctions.doCleanDate("4/02/2014 03:00:51").get());
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assertEquals("2012-03-19", GraphCleaningFunctions.doCleanDate("03/19/2012 10:11:59").get());
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assertEquals("2012-03-19", GraphCleaningFunctions.doCleanDate("03/19/2012 10:11:59.3186369").get());
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assertEquals("2014-03-31", GraphCleaningFunctions.doCleanDate("2014/3/31").get());
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assertEquals("2014-03-31", GraphCleaningFunctions.doCleanDate("2014/03/31").get());
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assertEquals("2014-04-08", GraphCleaningFunctions.doCleanDate("2014/4/8 22:05").get());
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assertEquals("2014-04-08", GraphCleaningFunctions.doCleanDate("2014/04/08 22:05").get());
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assertEquals("2014-04-02", GraphCleaningFunctions.doCleanDate("2014/04/2 03:00:51").get());
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assertEquals("2014-04-02", GraphCleaningFunctions.doCleanDate("2014/4/02 03:00:51").get());
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assertEquals("2012-03-19", GraphCleaningFunctions.doCleanDate("2012/03/19 10:11:59").get());
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assertEquals("2012-03-19", GraphCleaningFunctions.doCleanDate("2012/03/19 10:11:59.3186369").get());
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assertEquals("2014-04-08", GraphCleaningFunctions.doCleanDate("2014年04月08日").get());
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assertEquals("2006-01-02", GraphCleaningFunctions.doCleanDate("2006-01-02T15:04:05+0000").get());
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assertEquals("2009-08-13", GraphCleaningFunctions.doCleanDate("2009-08-12T22:15:09-07:00").get());
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assertEquals("2009-08-12", GraphCleaningFunctions.doCleanDate("2009-08-12T22:15:09").get());
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assertEquals("2009-08-13", GraphCleaningFunctions.doCleanDate("2009-08-12T22:15:09Z").get());
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assertEquals("2014-04-26", GraphCleaningFunctions.doCleanDate("2014-04-26 17:24:37.3186369").get());
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assertEquals("2012-08-03", GraphCleaningFunctions.doCleanDate("2012-08-03 18:31:59.257000000").get());
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assertEquals("2014-04-26", GraphCleaningFunctions.doCleanDate("2014-04-26 17:24:37.123").get());
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assertEquals("2013-04-01", GraphCleaningFunctions.doCleanDate("2013-04-01 22:43").get());
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assertEquals("2013-04-01", GraphCleaningFunctions.doCleanDate("2013-04-01 22:43:22").get());
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assertEquals("2014-12-16", GraphCleaningFunctions.doCleanDate("2014-12-16 06:20:00 UTC").get());
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assertEquals("2014-12-16", GraphCleaningFunctions.doCleanDate("2014-12-16 06:20:00 GMT").get());
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assertEquals("2014-04-26", GraphCleaningFunctions.doCleanDate("2014-04-26 05:24:37 PM").get());
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assertEquals("2014-04-26", GraphCleaningFunctions.doCleanDate("2014-04-26 13:13:43 +0800").get());
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assertEquals("2014-04-26", GraphCleaningFunctions.doCleanDate("2014-04-26 13:13:43 +0800 +08").get());
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assertEquals("2014-04-26", GraphCleaningFunctions.doCleanDate("2014-04-26 13:13:44 +09:00").get());
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assertEquals("2012-08-03", GraphCleaningFunctions.doCleanDate("2012-08-03 18:31:59.257000000 +0000 UTC").get());
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assertEquals("2015-09-30", GraphCleaningFunctions.doCleanDate("2015-09-30 18:48:56.35272715 +0000 UTC").get());
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assertEquals("2015-02-18", GraphCleaningFunctions.doCleanDate("2015-02-18 00:12:00 +0000 GMT").get());
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assertEquals("2015-02-18", GraphCleaningFunctions.doCleanDate("2015-02-18 00:12:00 +0000 UTC").get());
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GraphCleaningFunctions.cleanDate("Fri Jul 03 2015 18:04:07 GMT+0100 (GMT Daylight Time)"));
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assertEquals("2012-09-17", GraphCleaningFunctions.cleanDate("September 17, 2012 10:09am"));
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assertEquals("2012-09-17", GraphCleaningFunctions.cleanDate("September 17, 2012 at 10:09am PST-08"));
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assertEquals("2012-09-17", GraphCleaningFunctions.cleanDate("September 17, 2012, 10:10:09"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("October 7, 1970"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("October 7th, 1970"));
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assertEquals("2006-02-12", GraphCleaningFunctions.cleanDate("12 Feb 2006, 19:17"));
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assertEquals("2006-02-12", GraphCleaningFunctions.cleanDate("12 Feb 2006 19:17"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("7 oct 70"));
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assertEquals("1970-10-07", GraphCleaningFunctions.cleanDate("7 oct 1970"));
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assertEquals("2013-02-03", GraphCleaningFunctions.cleanDate("03 February 2013"));
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assertEquals("2013-07-01", GraphCleaningFunctions.cleanDate("1 July 2013"));
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assertEquals("2013-02-03", GraphCleaningFunctions.cleanDate("2013-Feb-03"));
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assertEquals("2014-03-31", GraphCleaningFunctions.cleanDate("3/31/2014"));
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assertEquals("2014-03-31", GraphCleaningFunctions.cleanDate("03/31/2014"));
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assertEquals("1971-08-21", GraphCleaningFunctions.cleanDate("08/21/71"));
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assertEquals("1971-01-08", GraphCleaningFunctions.cleanDate("8/1/71"));
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assertEquals("2014-08-04", GraphCleaningFunctions.cleanDate("4/8/2014 22:05"));
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assertEquals("2014-08-04", GraphCleaningFunctions.cleanDate("04/08/2014 22:05"));
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assertEquals("2014-08-04", GraphCleaningFunctions.cleanDate("4/8/14 22:05"));
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assertEquals("2014-02-04", GraphCleaningFunctions.cleanDate("04/2/2014 03:00:51"));
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assertEquals("1965-08-08", GraphCleaningFunctions.cleanDate("8/8/1965 12:00:00 AM"));
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assertEquals("1965-08-08", GraphCleaningFunctions.cleanDate("8/8/1965 01:00:01 PM"));
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assertEquals("1965-08-08", GraphCleaningFunctions.cleanDate("8/8/1965 01:00 PM"));
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assertEquals("1965-08-08", GraphCleaningFunctions.cleanDate("8/8/1965 1:00 PM"));
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assertEquals("1965-08-08", GraphCleaningFunctions.cleanDate("8/8/1965 12:00 AM"));
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assertEquals("2014-02-04", GraphCleaningFunctions.cleanDate("4/02/2014 03:00:51"));
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assertEquals("2012-03-19", GraphCleaningFunctions.cleanDate("03/19/2012 10:11:59"));
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assertEquals("2012-03-19", GraphCleaningFunctions.cleanDate("03/19/2012 10:11:59.3186369"));
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assertEquals("2014-03-31", GraphCleaningFunctions.cleanDate("2014/3/31"));
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assertEquals("2014-03-31", GraphCleaningFunctions.cleanDate("2014/03/31"));
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assertEquals("2014-04-08", GraphCleaningFunctions.cleanDate("2014/4/8 22:05"));
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assertEquals("2014-04-08", GraphCleaningFunctions.cleanDate("2014/04/08 22:05"));
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assertEquals("2014-04-02", GraphCleaningFunctions.cleanDate("2014/04/2 03:00:51"));
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assertEquals("2014-04-02", GraphCleaningFunctions.cleanDate("2014/4/02 03:00:51"));
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assertEquals("2012-03-19", GraphCleaningFunctions.cleanDate("2012/03/19 10:11:59"));
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assertEquals("2012-03-19", GraphCleaningFunctions.cleanDate("2012/03/19 10:11:59.3186369"));
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assertEquals("2014-04-08", GraphCleaningFunctions.cleanDate("2014年04月08日"));
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assertEquals("2006-01-02", GraphCleaningFunctions.cleanDate("2006-01-02T15:04:05+0000"));
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assertEquals("2009-08-13", GraphCleaningFunctions.cleanDate("2009-08-12T22:15:09-07:00"));
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assertEquals("2009-08-12", GraphCleaningFunctions.cleanDate("2009-08-12T22:15:09"));
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assertEquals("2014-04-26", GraphCleaningFunctions.cleanDate("2014-04-26 17:24:37.3186369"));
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assertEquals("2012-08-03", GraphCleaningFunctions.cleanDate("2012-08-03 18:31:59.257000000"));
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assertEquals("2014-04-26", GraphCleaningFunctions.cleanDate("2014-04-26 17:24:37.123"));
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assertEquals("2013-04-01", GraphCleaningFunctions.cleanDate("2013-04-01 22:43"));
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assertEquals("2013-04-01", GraphCleaningFunctions.cleanDate("2013-04-01 22:43:22"));
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assertEquals("2014-12-16", GraphCleaningFunctions.cleanDate("2014-12-16 06:20:00 UTC"));
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assertEquals("2014-12-16", GraphCleaningFunctions.cleanDate("2014-12-16 06:20:00 GMT"));
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assertEquals("2014-04-26", GraphCleaningFunctions.cleanDate("2014-04-26 05:24:37 PM"));
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assertEquals("2014-04-26", GraphCleaningFunctions.cleanDate("2014-04-26 13:13:43 +0800"));
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assertEquals("2014-04-26", GraphCleaningFunctions.cleanDate("2014-04-26 13:13:43 +0800 +08"));
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assertEquals("2014-04-26", GraphCleaningFunctions.cleanDate("2014-04-26 13:13:44 +09:00"));
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assertEquals("2012-08-03", GraphCleaningFunctions.cleanDate("2012-08-03 18:31:59.257000000 +0000 UTC"));
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assertEquals("2015-09-30", GraphCleaningFunctions.cleanDate("2015-09-30 18:48:56.35272715 +0000 UTC"));
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assertEquals("2015-02-18", GraphCleaningFunctions.cleanDate("2015-02-18 00:12:00 +0000 GMT"));
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assertEquals("2015-02-18", GraphCleaningFunctions.cleanDate("2015-02-18 00:12:00 +0000 UTC"));
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assertEquals(
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"2015-02-08", GraphCleaningFunctions.doCleanDate("2015-02-08 03:02:00 +0300 MSK m=+0.000000001").get());
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"2015-02-08", GraphCleaningFunctions.cleanDate("2015-02-08 03:02:00 +0300 MSK m=+0.000000001"));
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assertEquals(
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"2015-02-08", GraphCleaningFunctions.doCleanDate("2015-02-08 03:02:00.001 +0300 MSK m=+0.000000001").get());
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assertEquals("2017-07-19", GraphCleaningFunctions.doCleanDate("2017-07-19 03:21:51+00:00").get());
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assertEquals("2014-04-26", GraphCleaningFunctions.doCleanDate("2014-04-26").get());
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assertEquals("2014-04-01", GraphCleaningFunctions.doCleanDate("2014-04").get());
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assertEquals("2014-01-01", GraphCleaningFunctions.doCleanDate("2014").get());
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assertEquals("2014-05-11", GraphCleaningFunctions.doCleanDate("2014-05-11 08:20:13,787").get());
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assertEquals("2014-03-31", GraphCleaningFunctions.doCleanDate("3.31.2014").get());
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assertEquals("2014-03-31", GraphCleaningFunctions.doCleanDate("03.31.2014").get());
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assertEquals("1971-08-21", GraphCleaningFunctions.doCleanDate("08.21.71").get());
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assertEquals("2014-03-01", GraphCleaningFunctions.doCleanDate("2014.03").get());
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assertEquals("2014-03-30", GraphCleaningFunctions.doCleanDate("2014.03.30").get());
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assertEquals("2014-06-01", GraphCleaningFunctions.doCleanDate("20140601").get());
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assertEquals("2014-07-22", GraphCleaningFunctions.doCleanDate("20140722105203").get());
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assertEquals("2012-03-19", GraphCleaningFunctions.doCleanDate("1332151919").get());
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assertEquals("2013-11-12", GraphCleaningFunctions.doCleanDate("1384216367189").get());
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assertEquals("2013-11-12", GraphCleaningFunctions.doCleanDate("1384216367111222").get());
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assertEquals("2013-11-12", GraphCleaningFunctions.doCleanDate("1384216367111222333").get());
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"2015-02-08", GraphCleaningFunctions.cleanDate("2015-02-08 03:02:00.001 +0300 MSK m=+0.000000001"));
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assertEquals("2017-07-19", GraphCleaningFunctions.cleanDate("2017-07-19 03:21:51+00:00"));
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assertEquals("2014-04-26", GraphCleaningFunctions.cleanDate("2014-04-26"));
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assertEquals("2014-04-01", GraphCleaningFunctions.cleanDate("2014-04"));
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assertEquals("2014-01-01", GraphCleaningFunctions.cleanDate("2014"));
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assertEquals("2014-05-11", GraphCleaningFunctions.cleanDate("2014-05-11 08:20:13,787"));
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assertEquals("2014-03-31", GraphCleaningFunctions.cleanDate("3.31.2014"));
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assertEquals("2014-03-31", GraphCleaningFunctions.cleanDate("03.31.2014"));
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assertEquals("1971-08-21", GraphCleaningFunctions.cleanDate("08.21.71"));
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assertEquals("2014-03-01", GraphCleaningFunctions.cleanDate("2014.03"));
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assertEquals("2014-03-30", GraphCleaningFunctions.cleanDate("2014.03.30"));
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assertEquals("2014-06-01", GraphCleaningFunctions.cleanDate("20140601"));
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assertEquals("2014-07-22", GraphCleaningFunctions.cleanDate("20140722105203"));
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assertEquals("2012-03-19", GraphCleaningFunctions.cleanDate("1332151919"));
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assertEquals("2013-11-12", GraphCleaningFunctions.cleanDate("1384216367189"));
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assertEquals("2013-11-12", GraphCleaningFunctions.cleanDate("1384216367111222"));
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assertEquals("2013-11-12", GraphCleaningFunctions.cleanDate("1384216367111222333"));
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}
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@ -27,15 +27,7 @@ import static eu.dnetlib.dhp.schema.common.ModelConstants.RESULT_PROJECT;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.RESULT_RESULT;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.SOFTWARE_DEFAULT_RESULTTYPE;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.USER_CLAIM;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.asString;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.createOpenaireId;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.dataInfo;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.field;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.journal;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.listFields;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.listKeyValues;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.qualifier;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.structuredProperty;
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import static eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils.*;
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import java.io.Closeable;
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import java.io.IOException;
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@ -245,22 +237,20 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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ds
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.setOriginalId(
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Arrays
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.asList((String[]) rs.getArray("identities").getArray())
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.asList((String[]) rs.getArray("originalid").getArray())
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.stream()
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.filter(StringUtils::isNotBlank)
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.collect(Collectors.toList()));
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ds
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.setCollectedfrom(
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listKeyValues(
|
||||
createOpenaireId(10, rs.getString("collectedfromid"), true),
|
||||
rs.getString("collectedfromname")));
|
||||
ds.setPid(new ArrayList<>());
|
||||
ds.setCollectedfrom(prepareCollectedfrom(rs.getArray("collectedfrom")));
|
||||
ds.setPid(prepareListOfStructProps(rs.getArray("pid"), info));
|
||||
ds.setDateofcollection(asString(rs.getDate("dateofcollection")));
|
||||
ds.setDateoftransformation(null); // Value not returned by the SQL query
|
||||
ds.setExtraInfo(new ArrayList<>()); // Values not present in the DB
|
||||
ds.setOaiprovenance(null); // Values not present in the DB
|
||||
ds.setDatasourcetype(prepareQualifierSplitting(rs.getString("datasourcetype")));
|
||||
ds.setDatasourcetypeui(prepareQualifierSplitting(rs.getString("datasourcetypeui")));
|
||||
ds.setEosctype(prepareQualifierSplitting(rs.getString("eosctype")));
|
||||
ds.setEoscdatasourcetype(prepareQualifierSplitting(rs.getString("eoscdatasourcetype")));
|
||||
ds.setOpenairecompatibility(prepareQualifierSplitting(rs.getString("openairecompatibility")));
|
||||
ds.setOfficialname(field(rs.getString("officialname"), info));
|
||||
ds.setEnglishname(field(rs.getString("englishname"), info));
|
||||
|
|
@ -277,6 +267,7 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
|
|||
ds.setOdnumberofitemsdate(field(asString(rs.getDate("odnumberofitemsdate")), info));
|
||||
ds.setOdpolicies(field(rs.getString("odpolicies"), info));
|
||||
ds.setOdlanguages(prepareListFields(rs.getArray("odlanguages"), info));
|
||||
ds.setLanguages(listValues(rs.getArray("languages")));
|
||||
ds.setOdcontenttypes(prepareListFields(rs.getArray("odcontenttypes"), info));
|
||||
ds.setAccessinfopackage(prepareListFields(rs.getArray("accessinfopackage"), info));
|
||||
ds.setReleasestartdate(field(asString(rs.getDate("releasestartdate")), info));
|
||||
|
|
@ -289,8 +280,9 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
|
|||
ds.setDatabaseaccessrestriction(field(rs.getString("databaseaccessrestriction"), info));
|
||||
ds.setDatauploadrestriction(field(rs.getString("datauploadrestriction"), info));
|
||||
ds.setVersioning(field(rs.getBoolean("versioning"), info));
|
||||
ds.setVersioncontrol(rs.getBoolean("versioncontrol"));
|
||||
ds.setCitationguidelineurl(field(rs.getString("citationguidelineurl"), info));
|
||||
ds.setQualitymanagementkind(field(rs.getString("qualitymanagementkind"), info));
|
||||
|
||||
ds.setPidsystems(field(rs.getString("pidsystems"), info));
|
||||
ds.setCertificates(field(rs.getString("certificates"), info));
|
||||
ds.setPolicies(new ArrayList<>()); // The sql query returns an empty array
|
||||
|
|
@ -299,13 +291,20 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
|
|||
journal(
|
||||
rs.getString("officialname"), rs.getString("issnPrinted"), rs.getString("issnOnline"),
|
||||
rs.getString("issnLinking"), info)); // Journal
|
||||
ds.setDataInfo(info);
|
||||
ds.setLastupdatetimestamp(lastUpdateTimestamp);
|
||||
|
||||
ds.setResearchentitytypes(listValues(rs.getArray("researchentitytypes")));
|
||||
ds.setProvidedproducttypes(listValues(rs.getArray("providedproducttypes")));
|
||||
ds.setJurisdiction(prepareQualifierSplitting(rs.getString("jurisdiction")));
|
||||
ds.setThematic(rs.getBoolean("thematic"));
|
||||
ds.setKnowledgegraph(rs.getBoolean("knowledgegraph"));
|
||||
ds.setContentpolicies(prepareListOfQualifiers(rs.getArray("contentpolicies")));
|
||||
ds.setSubmissionpolicyurl(rs.getString("submissionpolicyurl"));
|
||||
ds.setPreservationpolicyurl(rs.getString("preservationpolicyurl"));
|
||||
ds.setResearchproductaccesspolicies(listValues(rs.getArray("researchproductaccesspolicies")));
|
||||
ds
|
||||
.setResearchproductmetadataaccesspolicies(
|
||||
listValues(rs.getArray("researchproductmetadataaccesspolicies")));
|
||||
|
||||
ds.setConsenttermsofuse(rs.getBoolean("consenttermsofuse"));
|
||||
ds.setFulltextdownload(rs.getBoolean("fulltextdownload"));
|
||||
ds
|
||||
|
|
@ -313,8 +312,18 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
|
|||
Optional
|
||||
.ofNullable(
|
||||
rs.getDate("consenttermsofusedate"))
|
||||
.map(c -> c.toString())
|
||||
.map(java.sql.Date::toString)
|
||||
.orElse(null));
|
||||
ds
|
||||
.setLastconsenttermsofusedate(
|
||||
Optional
|
||||
.ofNullable(
|
||||
rs.getDate("lastconsenttermsofusedate"))
|
||||
.map(java.sql.Date::toString)
|
||||
.orElse(null));
|
||||
|
||||
ds.setDataInfo(info);
|
||||
ds.setLastupdatetimestamp(lastUpdateTimestamp);
|
||||
|
||||
return Arrays.asList(ds);
|
||||
} catch (final Exception e) {
|
||||
|
|
@ -603,6 +612,32 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
|
|||
String.format("%.3f", trust));
|
||||
}
|
||||
|
||||
private List<KeyValue> prepareCollectedfrom(Array values) throws SQLException {
|
||||
if (Objects.isNull(values)) {
|
||||
return null;
|
||||
}
|
||||
return Arrays
|
||||
.stream((String[]) values.getArray())
|
||||
.filter(Objects::nonNull)
|
||||
.distinct()
|
||||
.map(s -> keyValueSplitting(s, "@@@"))
|
||||
.collect(Collectors.toList());
|
||||
}
|
||||
|
||||
public static KeyValue keyValueSplitting(final String s, String separator) {
|
||||
if (StringUtils.isBlank(s)) {
|
||||
return null;
|
||||
}
|
||||
final String[] arr = s.split(separator);
|
||||
if (arr.length != 2) {
|
||||
return null;
|
||||
}
|
||||
KeyValue kv = new KeyValue();
|
||||
kv.setKey(createOpenaireId(10, arr[0], true));
|
||||
kv.setValue(arr[1]);
|
||||
return kv;
|
||||
}
|
||||
|
||||
private Qualifier prepareQualifierSplitting(final String s) {
|
||||
if (StringUtils.isBlank(s)) {
|
||||
return null;
|
||||
|
|
|
|||
|
|
@ -1,6 +1,7 @@
|
|||
SELECT
|
||||
d.id AS datasourceid,
|
||||
array_remove(d.id || array_agg(distinct di.pid) filter (where di.pid like 'piwik%') || array_agg(distinct dds.duplicate), NULL) AS identities,
|
||||
array_remove(d.id || array_agg(distinct CASE WHEN dp.pid like 'piwik%' THEN di.pid ELSE NULL END) || array_agg(distinct dds.duplicate), NULL) AS originalid,
|
||||
array_remove(array_agg(distinct CASE WHEN di.pid NOT LIKE 'piwik%' THEN di.pid||'###'||di.issuertype||'@@@'||'dnet:pid_types' ELSE NULL END), NULL) as pid,
|
||||
d.officialname AS officialname,
|
||||
d.englishname AS englishname,
|
||||
d.contactemail AS contactemail,
|
||||
|
|
@ -9,8 +10,8 @@ SELECT
|
|||
THEN
|
||||
'openaire-cris_1.1@@@dnet:datasourceCompatibilityLevel'
|
||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['openaire4.0'])
|
||||
THEN
|
||||
'openaire4.0@@@dnet:datasourceCompatibilityLevel'
|
||||
THEN
|
||||
'openaire4.0@@@dnet:datasourceCompatibilityLevel'
|
||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['driver', 'openaire2.0'])
|
||||
THEN
|
||||
'driver-openaire2.0@@@dnet:datasourceCompatibilityLevel'
|
||||
|
|
@ -40,29 +41,28 @@ SELECT
|
|||
END AS openairecompatibility,
|
||||
d.websiteurl AS websiteurl,
|
||||
d.logourl AS logourl,
|
||||
array_agg(DISTINCT CASE WHEN a.protocol = 'oai' and last_aggregation_date is not null THEN a.baseurl ELSE NULL END) AS accessinfopackage,
|
||||
array_remove(array_agg(DISTINCT CASE WHEN a.protocol = 'oai' and last_aggregation_date is not null THEN a.baseurl ELSE NULL END), NULL) AS accessinfopackage,
|
||||
d.latitude AS latitude,
|
||||
d.longitude AS longitude,
|
||||
d.namespaceprefix AS namespaceprefix,
|
||||
NULL AS odnumberofitems,
|
||||
NULL AS odnumberofitemsdate,
|
||||
|
||||
(SELECT array_agg(s|| '###keywords@@@dnet:subject_classification_typologies')
|
||||
FROM UNNEST(
|
||||
ARRAY(
|
||||
SELECT trim(s)
|
||||
FROM unnest(string_to_array(d.subjects, '@@')) AS s)) AS s) AS subjects,
|
||||
FROM unnest(string_to_array(d.subjects, '@@')) AS s)) AS s) AS subjects,
|
||||
|
||||
d.description AS description,
|
||||
NULL AS odpolicies,
|
||||
ARRAY(SELECT trim(s)
|
||||
FROM unnest(string_to_array(d.languages, ',')) AS s) AS odlanguages,
|
||||
ARRAY(SELECT trim(s)
|
||||
FROM unnest(string_to_array(d.languages, ',')) AS s) AS languages,
|
||||
array_remove(ARRAY(SELECT trim(s)
|
||||
FROM unnest(string_to_array(regexp_replace(d.languages, '{|}|"', '', 'g') ',')) AS s), '{}') AS odlanguages,
|
||||
array_remove(ARRAY(SELECT trim(s)
|
||||
FROM unnest(string_to_array(regexp_replace(d.languages, '{|}|"', '', 'g') ',')) AS s), '{}') AS languages,
|
||||
-- Term provided only by OpenDOAR:
|
||||
-- probably updating the TR it could be replaced by research_entity_types[]
|
||||
-- But a study on the vocabulary terms is needed
|
||||
-- REMOVED: ARRAY(SELECT trim(s) FROM unnest(string_to_array(d.od_contenttypes, '-')) AS s) AS odcontenttypes,
|
||||
-- REMOVED: ARRAY(SELECT trim(s) FROM unnest(string_to_array(d.od_contenttypes, '-')) AS s) AS odcontenttypes,
|
||||
|
||||
false AS inferred,
|
||||
false AS deletedbyinference,
|
||||
|
|
@ -81,20 +81,24 @@ SELECT
|
|||
d.datauploadtype AS datauploadtype,
|
||||
d.databaseaccessrestriction AS databaseaccessrestriction,
|
||||
d.datauploadrestriction AS datauploadrestriction,
|
||||
-- REPLACED BY version_control : d.versioning AS versioning,
|
||||
-- REPLACED BY version_control : d.versioning AS versioning,
|
||||
d.version_control AS versioning,
|
||||
d.version_control AS versioncontrol,
|
||||
d.citationguidelineurl AS citationguidelineurl,
|
||||
|
||||
d.pidsystems AS pidsystems,
|
||||
array_to_string(array_agg(distinct dps.scheme), ' ') AS pidsystems,
|
||||
d.certificates AS certificates,
|
||||
ARRAY[]::text[] AS policies,
|
||||
array_remove(dc.id||'@@@'||dc.officialname || array_agg(distinct dds_cf.id||'@@@'||dds_cf.officialname), NULL) AS collectedfrom,
|
||||
|
||||
array_remove(
|
||||
array(
|
||||
select distinct cf
|
||||
from unnest(
|
||||
dc.id||'@@@'||dc.officialname || array_agg(distinct dds_cf.id||'@@@'||dds_cf.officialname)
|
||||
) as cf),
|
||||
NULL) AS collectedfrom,
|
||||
d._typology_to_remove_||'@@@dnet:datasource_typologies' AS datasourcetype,
|
||||
d._typology_to_remove_||'@@@dnet:datasource_typologies_ui' AS datasourcetypeui,
|
||||
d.eosc_type||'@@@dnet:eosc_types' AS eosctype,
|
||||
d.eosc_datasource_type||'@@@dnet:eosc_datasource_types' AS eoscdatasourcetype,
|
||||
'sysimport:crosswalk:entityregistry@@@dnet:provenance_actions' AS provenanceaction,
|
||||
d.issn AS issnPrinted,
|
||||
d.eissn AS issnOnline,
|
||||
d.lissn AS issnLinking,
|
||||
|
|
@ -107,19 +111,20 @@ SELECT
|
|||
d.thematic AS thematic,
|
||||
-- REMOVED ???: d.knowledge_graph AS knowledgegraph,
|
||||
array(select unnest(d.content_policies)||'@@@eosc:contentpolicies') AS contentpolicies,
|
||||
d.submission_policy_url AS submissionpolicyurl,
|
||||
d.preservation_policy_url AS preservationpolicyurl,
|
||||
d.research_product_access_policies AS researchproductaccesspolicies,
|
||||
d.research_product_metadata_access_policies AS researchproductmetadataaccesspolicies
|
||||
nullif(trim(d.submission_policy_url), '') AS submissionpolicyurl,
|
||||
nullif(trim(d.preservation_policy_url), '') AS preservationpolicyurl,
|
||||
array_remove(d.research_product_access_policies, '') AS researchproductaccesspolicies,
|
||||
array_remove(d.research_product_metadata_access_policies, '') AS researchproductmetadataaccesspolicies
|
||||
|
||||
FROM dsm_services d
|
||||
LEFT OUTER JOIN dsm_services dc on (d.collectedfrom = dc.id)
|
||||
LEFT OUTER JOIN dsm_api a ON (d.id = a.service)
|
||||
LEFT OUTER JOIN dsm_servicepids di ON (d.id = di.service)
|
||||
LEFT OUTER JOIN dsm_servicepids dp ON (d.id = dp.service)
|
||||
LEFT OUTER JOIN dsm_identities di ON (dp.pid = di.pid)
|
||||
LEFT OUTER JOIN dsm_dedup_services dds ON (d.id = dds.id)
|
||||
LEFT OUTER JOIN dsm_services dds_dup ON (dds.duplicate = dds_dup.id)
|
||||
LEFT OUTER JOIN dsm_services dds_cf ON (dds_dup.collectedfrom = dds_cf.id)
|
||||
|
||||
LEFT OUTER JOIN dsm_pid_systems dps ON (d.id = dps.service)
|
||||
|
||||
WHERE
|
||||
d.dedup_main_service = true
|
||||
|
|
@ -150,7 +155,6 @@ GROUP BY
|
|||
d.version_control,
|
||||
d.citationguidelineurl,
|
||||
-- REMOVED: d.qualitymanagementkind,
|
||||
d.pidsystems,
|
||||
d.certificates,
|
||||
dc.id,
|
||||
dc.officialname,
|
||||
|
|
|
|||
|
|
@ -12,8 +12,11 @@ import java.sql.Array;
|
|||
import java.sql.Date;
|
||||
import java.sql.ResultSet;
|
||||
import java.sql.SQLException;
|
||||
import java.util.HashSet;
|
||||
import java.util.List;
|
||||
import java.util.Objects;
|
||||
import java.util.Optional;
|
||||
import java.util.stream.Collectors;
|
||||
|
||||
import org.apache.commons.io.IOUtils;
|
||||
import org.apache.commons.lang3.StringUtils;
|
||||
|
|
@ -28,12 +31,7 @@ import com.fasterxml.jackson.core.type.TypeReference;
|
|||
import com.fasterxml.jackson.databind.ObjectMapper;
|
||||
|
||||
import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup;
|
||||
import eu.dnetlib.dhp.schema.oaf.Datasource;
|
||||
import eu.dnetlib.dhp.schema.oaf.Oaf;
|
||||
import eu.dnetlib.dhp.schema.oaf.Organization;
|
||||
import eu.dnetlib.dhp.schema.oaf.Project;
|
||||
import eu.dnetlib.dhp.schema.oaf.Relation;
|
||||
import eu.dnetlib.dhp.schema.oaf.Result;
|
||||
import eu.dnetlib.dhp.schema.oaf.*;
|
||||
import eu.dnetlib.dhp.schema.oaf.utils.OafMapperUtils;
|
||||
|
||||
@ExtendWith(MockitoExtension.class)
|
||||
|
|
@ -64,7 +62,7 @@ public class MigrateDbEntitiesApplicationTest {
|
|||
|
||||
@Test
|
||||
public void testProcessService() throws Exception {
|
||||
final List<TypedField> fields = prepareMocks("datasources_resultset_entry.json");
|
||||
final List<TypedField> fields = prepareMocks("services_resultset_entry.json");
|
||||
|
||||
final List<Oaf> list = app.processService(rs);
|
||||
assertEquals(1, list.size());
|
||||
|
|
@ -72,13 +70,17 @@ public class MigrateDbEntitiesApplicationTest {
|
|||
|
||||
final Datasource ds = (Datasource) list.get(0);
|
||||
assertValidId(ds.getId());
|
||||
assertValidId(ds.getCollectedfrom().get(0).getKey());
|
||||
ds
|
||||
.getCollectedfrom()
|
||||
.stream()
|
||||
.map(KeyValue::getKey)
|
||||
.forEach(dsId -> assertValidId(dsId));
|
||||
assertEquals(getValueAsString("officialname", fields), ds.getOfficialname().getValue());
|
||||
assertEquals(getValueAsString("englishname", fields), ds.getEnglishname().getValue());
|
||||
assertEquals(getValueAsString("contactemail", fields), ds.getContactemail().getValue());
|
||||
assertEquals(getValueAsString("websiteurl", fields), ds.getWebsiteurl().getValue());
|
||||
assertEquals(getValueAsString("logourl", fields), ds.getLogourl());
|
||||
assertEquals(getValueAsString("contactemail", fields), ds.getContactemail().getValue());
|
||||
assertEquals(getValueAsString("namespaceprefix", fields), ds.getNamespaceprefix().getValue());
|
||||
assertEquals(getValueAsString("collectedfromname", fields), ds.getCollectedfrom().get(0).getValue());
|
||||
assertEquals(getValueAsString("officialname", fields), ds.getJournal().getName());
|
||||
assertEquals(getValueAsString("issnPrinted", fields), ds.getJournal().getIssnPrinted());
|
||||
assertEquals(getValueAsString("issnOnline", fields), ds.getJournal().getIssnOnline());
|
||||
|
|
@ -90,19 +92,103 @@ public class MigrateDbEntitiesApplicationTest {
|
|||
assertEquals("pubsrepository::journal", ds.getDatasourcetypeui().getClassid());
|
||||
assertEquals("dnet:datasource_typologies_ui", ds.getDatasourcetypeui().getSchemeid());
|
||||
|
||||
assertEquals("Data Source", ds.getEosctype().getClassid());
|
||||
assertEquals("Data Source", ds.getEosctype().getClassname());
|
||||
assertEquals("dnet:eosc_types", ds.getEosctype().getSchemeid());
|
||||
assertEquals("dnet:eosc_types", ds.getEosctype().getSchemename());
|
||||
|
||||
assertEquals("Journal archive", ds.getEoscdatasourcetype().getClassid());
|
||||
assertEquals("Journal archive", ds.getEoscdatasourcetype().getClassname());
|
||||
assertEquals("dnet:eosc_datasource_types", ds.getEoscdatasourcetype().getSchemeid());
|
||||
assertEquals("dnet:eosc_datasource_types", ds.getEoscdatasourcetype().getSchemename());
|
||||
|
||||
assertEquals("openaire4.0", ds.getOpenairecompatibility().getClassid());
|
||||
assertEquals("openaire4.0", ds.getOpenairecompatibility().getClassname());
|
||||
assertEquals("dnet:datasourceCompatibilityLevel", ds.getOpenairecompatibility().getSchemeid());
|
||||
assertEquals("dnet:datasourceCompatibilityLevel", ds.getOpenairecompatibility().getSchemename());
|
||||
|
||||
assertEquals(getValueAsDouble("latitude", fields).toString(), ds.getLatitude().getValue());
|
||||
assertEquals(getValueAsDouble("longitude", fields).toString(), ds.getLongitude().getValue());
|
||||
assertEquals(getValueAsString("dateofvalidation", fields), ds.getDateofvalidation());
|
||||
|
||||
assertEquals(getValueAsString("description", fields), ds.getDescription().getValue());
|
||||
|
||||
// TODO assertEquals(getValueAsString("subjects", fields), ds.getSubjects());
|
||||
|
||||
assertEquals("0.0", ds.getOdnumberofitems().getValue());
|
||||
assertEquals(getValueAsString("odnumberofitemsdate", fields), ds.getOdnumberofitemsdate());
|
||||
assertEquals(getValueAsString("odpolicies", fields), ds.getOdpolicies());
|
||||
|
||||
assertEquals(
|
||||
getValueAsList("odlanguages", fields),
|
||||
ds.getOdlanguages().stream().map(Field::getValue).collect(Collectors.toList()));
|
||||
assertEquals(getValueAsList("languages", fields), ds.getLanguages());
|
||||
assertEquals(
|
||||
getValueAsList("odcontenttypes", fields),
|
||||
ds.getOdcontenttypes().stream().map(Field::getValue).collect(Collectors.toList()));
|
||||
assertEquals(
|
||||
getValueAsList("accessinfopackage", fields),
|
||||
ds.getAccessinfopackage().stream().map(Field::getValue).collect(Collectors.toList()));
|
||||
assertEquals(getValueAsString("releasestartdate", fields), ds.getReleasestartdate());
|
||||
assertEquals(getValueAsString("releaseenddate", fields), ds.getReleasestartdate());
|
||||
assertEquals(getValueAsString("missionstatementurl", fields), ds.getMissionstatementurl());
|
||||
|
||||
assertEquals(false, ds.getDataprovider().getValue());
|
||||
assertEquals(false, ds.getServiceprovider().getValue());
|
||||
|
||||
assertEquals(getValueAsString("databaseaccesstype", fields), ds.getDatabaseaccesstype());
|
||||
assertEquals(getValueAsString("datauploadtype", fields), ds.getDatauploadtype());
|
||||
assertEquals(getValueAsString("databaseaccessrestriction", fields), ds.getDatabaseaccessrestriction());
|
||||
assertEquals(getValueAsString("datauploadrestriction", fields), ds.getDatauploadrestriction());
|
||||
|
||||
assertEquals(false, ds.getVersioning().getValue());
|
||||
assertEquals(false, ds.getVersioncontrol());
|
||||
|
||||
assertEquals(getValueAsString("citationguidelineurl", fields), ds.getCitationguidelineurl());
|
||||
assertEquals(getValueAsString("pidsystems", fields), ds.getPidsystems());
|
||||
assertEquals(getValueAsString("certificates", fields), ds.getCertificates());
|
||||
|
||||
assertEquals(getValueAsList("researchentitytypes", fields), ds.getResearchentitytypes());
|
||||
assertEquals(getValueAsList("providedproducttypes", fields), ds.getProvidedproducttypes());
|
||||
|
||||
assertEquals("National", ds.getJurisdiction().getClassid());
|
||||
assertEquals("eosc:jurisdictions", ds.getJurisdiction().getSchemeid());
|
||||
|
||||
assertTrue(ds.getThematic());
|
||||
assertTrue(ds.getKnowledgegraph());
|
||||
|
||||
assertEquals(1, ds.getContentpolicies().size());
|
||||
assertEquals("Journal article", ds.getContentpolicies().get(0).getClassid());
|
||||
assertEquals("eosc:contentpolicies", ds.getContentpolicies().get(0).getSchemeid());
|
||||
HashSet<String> cpSchemeId = ds
|
||||
.getContentpolicies()
|
||||
.stream()
|
||||
.map(Qualifier::getSchemeid)
|
||||
.collect(Collectors.toCollection(HashSet::new));
|
||||
assertTrue(cpSchemeId.size() == 1);
|
||||
assertTrue(cpSchemeId.contains("eosc:contentpolicies"));
|
||||
HashSet<String> cpSchemeName = ds
|
||||
.getContentpolicies()
|
||||
.stream()
|
||||
.map(Qualifier::getSchemename)
|
||||
.collect(Collectors.toCollection(HashSet::new));
|
||||
assertTrue(cpSchemeName.size() == 1);
|
||||
assertTrue(cpSchemeName.contains("eosc:contentpolicies"));
|
||||
assertEquals(2, ds.getContentpolicies().size());
|
||||
assertEquals("Taxonomic classification", ds.getContentpolicies().get(0).getClassid());
|
||||
assertEquals("Resource collection", ds.getContentpolicies().get(1).getClassid());
|
||||
|
||||
assertEquals(getValueAsString("submissionpolicyurl", fields), ds.getSubmissionpolicyurl());
|
||||
assertEquals(getValueAsString("preservationpolicyurl", fields), ds.getPreservationpolicyurl());
|
||||
|
||||
assertEquals(
|
||||
getValueAsList("researchproductaccesspolicies", fields),
|
||||
ds.getResearchproductaccesspolicies());
|
||||
assertEquals(
|
||||
getValueAsList("researchproductmetadataaccesspolicies", fields),
|
||||
ds.getResearchproductmetadataaccesspolicies());
|
||||
|
||||
assertEquals(true, ds.getConsenttermsofuse());
|
||||
assertEquals(true, ds.getFulltextdownload());
|
||||
assertEquals("2022-03-11", ds.getConsenttermsofusedate());
|
||||
assertEquals("2022-03-11", ds.getLastconsenttermsofusedate());
|
||||
}
|
||||
|
||||
@Test
|
||||
|
|
@ -356,18 +442,31 @@ public class MigrateDbEntitiesApplicationTest {
|
|||
}
|
||||
|
||||
private Float getValueAsFloat(final String name, final List<TypedField> fields) {
|
||||
return new Float(getValueAs(name, fields).toString());
|
||||
final Object value = getValueAs(name, fields);
|
||||
return value != null ? new Float(value.toString()) : null;
|
||||
}
|
||||
|
||||
private Double getValueAsDouble(final String name, final List<TypedField> fields) {
|
||||
final Object value = getValueAs(name, fields);
|
||||
return value != null ? new Double(value.toString()) : null;
|
||||
}
|
||||
|
||||
private Integer getValueAsInt(final String name, final List<TypedField> fields) {
|
||||
final Object value = getValueAs(name, fields);
|
||||
return value != null ? new Integer(value.toString()) : null;
|
||||
}
|
||||
|
||||
private <T> T getValueAs(final String name, final List<TypedField> fields) {
|
||||
return fields
|
||||
final Optional<T> field = fields
|
||||
.stream()
|
||||
.filter(f -> f.getField().equals(name))
|
||||
.map(TypedField::getValue)
|
||||
.filter(Objects::nonNull)
|
||||
.map(o -> (T) o)
|
||||
.findFirst()
|
||||
.get();
|
||||
.map(TypedField::getValue)
|
||||
.map(o -> (T) o);
|
||||
if (!field.isPresent()) {
|
||||
return null;
|
||||
}
|
||||
return field.get();
|
||||
}
|
||||
|
||||
private List<String> getValueAsList(final String name, final List<TypedField> fields) {
|
||||
|
|
|
|||
|
|
@ -5,14 +5,47 @@
|
|||
"value": "274269ac6f3b::2579-5449"
|
||||
},
|
||||
{
|
||||
"field": "identities",
|
||||
"field": "originalid",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"274269ac6f3b::2579-5449",
|
||||
"fairsharing_::1562",
|
||||
"piwik:13",
|
||||
null
|
||||
null,
|
||||
"re3data_____::r3d100010213"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "pid",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"r3d100010218###re3data@@@dnet:pid_types"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "datasourcetype",
|
||||
"type": "string",
|
||||
"value": "pubsrepository::journal@@@dnet:datasource_typologies"
|
||||
},
|
||||
{
|
||||
"field": "datasourcetypeui",
|
||||
"type": "string",
|
||||
"value": "pubsrepository::journal@@@dnet:datasource_typologies_ui"
|
||||
},
|
||||
{
|
||||
"field": "eosctype",
|
||||
"type": "string",
|
||||
"value": "Data Source@@@dnet:eosc_types"
|
||||
},
|
||||
{
|
||||
"field": "eoscdatasourcetype",
|
||||
"type": "string",
|
||||
"value": "Journal archive@@@dnet:eosc_datasource_types"
|
||||
},
|
||||
{
|
||||
"field": "openairecompatibility",
|
||||
"type": "string",
|
||||
"value": "openaire4.0@@@dnet:datasourceCompatibilityLevel"
|
||||
},
|
||||
{
|
||||
"field": "officialname",
|
||||
"type": "string",
|
||||
|
|
@ -23,16 +56,6 @@
|
|||
"type": "string",
|
||||
"value": "Jurnal Ilmiah Pendidikan Scholastic"
|
||||
},
|
||||
{
|
||||
"field": "contactemail",
|
||||
"type": "string",
|
||||
"value": "test@test.it"
|
||||
},
|
||||
{
|
||||
"field": "openairecompatibility",
|
||||
"type": "string",
|
||||
"value": "hostedBy@@@dnet:datasourceCompatibilityLevel"
|
||||
},
|
||||
{
|
||||
"field": "websiteurl",
|
||||
"type": "string",
|
||||
|
|
@ -44,11 +67,14 @@
|
|||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "accessinfopackage",
|
||||
"type": "array",
|
||||
"value": [
|
||||
null
|
||||
]
|
||||
"field": "contactemail",
|
||||
"type": "string",
|
||||
"value": "test@test.it"
|
||||
},
|
||||
{
|
||||
"field": "namespaceprefix",
|
||||
"type": "string",
|
||||
"value": "ojs_25795449"
|
||||
},
|
||||
{
|
||||
"field": "latitude",
|
||||
|
|
@ -61,9 +87,19 @@
|
|||
"value": 0
|
||||
},
|
||||
{
|
||||
"field": "namespaceprefix",
|
||||
"field": "dateofvalidation",
|
||||
"type": "date",
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "description",
|
||||
"type": "string",
|
||||
"value": "ojs_25795449"
|
||||
"value": "veterinary medicine"
|
||||
},
|
||||
{
|
||||
"field": "subjects",
|
||||
"type": "array",
|
||||
"value": []
|
||||
},
|
||||
{
|
||||
"field": "odnumberofitems",
|
||||
|
|
@ -75,16 +111,6 @@
|
|||
"type": "date",
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "subjects",
|
||||
"type": "array",
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "description",
|
||||
"type": "string",
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "odpolicies",
|
||||
"type": "string",
|
||||
|
|
@ -93,7 +119,26 @@
|
|||
{
|
||||
"field": "odlanguages",
|
||||
"type": "array",
|
||||
"value": []
|
||||
"value": [
|
||||
"English",
|
||||
"German",
|
||||
"French",
|
||||
"Danish",
|
||||
"Norwegian",
|
||||
"Swedish"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "languages",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"English",
|
||||
"German",
|
||||
"French",
|
||||
"Danish",
|
||||
"Norwegian",
|
||||
"Swedish"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "odcontenttypes",
|
||||
|
|
@ -103,34 +148,11 @@
|
|||
]
|
||||
},
|
||||
{
|
||||
"field": "inferred",
|
||||
"type": "boolean",
|
||||
"value": false
|
||||
},
|
||||
{
|
||||
"field": "deletedbyinference",
|
||||
"type": "boolean",
|
||||
"value": false
|
||||
},
|
||||
{
|
||||
"field": "trust",
|
||||
"type": "double",
|
||||
"value": 0.9
|
||||
},
|
||||
{
|
||||
"field": "inferenceprovenance",
|
||||
"type": "string",
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "dateofcollection",
|
||||
"type": "date",
|
||||
"value": "2020-01-21"
|
||||
},
|
||||
{
|
||||
"field": "dateofvalidation",
|
||||
"type": "date",
|
||||
"value": null
|
||||
"field": "accessinfopackage",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"http://www.revista.vocesdelaeducacion.com.mx/index.php/index/oai"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "releasestartdate",
|
||||
|
|
@ -183,12 +205,12 @@
|
|||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "citationguidelineurl",
|
||||
"type": "string",
|
||||
"field": "versioncontrol",
|
||||
"type": "boolean",
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "qualitymanagementkind",
|
||||
"field": "citationguidelineurl",
|
||||
"type": "string",
|
||||
"value": null
|
||||
},
|
||||
|
|
@ -208,29 +230,38 @@
|
|||
"value": []
|
||||
},
|
||||
{
|
||||
"field": "collectedfromid",
|
||||
"type": "string",
|
||||
"value": "openaire____::SnVybmFsIEZha3VsdGFzIFNhc3RyYSBVbml2ZXJzaXRhcyBFa2FzYWt0aQ=="
|
||||
"field": "inferred",
|
||||
"type": "boolean",
|
||||
"value": false
|
||||
},
|
||||
{
|
||||
"field": "collectedfromname",
|
||||
"type": "string",
|
||||
"value": "Jurnal Fakultas Sastra Universitas Ekasakti"
|
||||
"field": "deletedbyinference",
|
||||
"type": "boolean",
|
||||
"value": false
|
||||
},
|
||||
{
|
||||
"field": "datasourcetype",
|
||||
"type": "string",
|
||||
"value": "pubsrepository::journal@@@dnet:datasource_typologies"
|
||||
"field": "trust",
|
||||
"type": "double",
|
||||
"value": 0.9
|
||||
},
|
||||
{
|
||||
"field": "datasourcetypeui",
|
||||
"field": "inferenceprovenance",
|
||||
"type": "string",
|
||||
"value": "pubsrepository::journal@@@dnet:datasource_typologies_ui"
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "provenanceaction",
|
||||
"type": "not_used",
|
||||
"value": "sysimport:crosswalk:entityregistry@@@dnet:provenance_actions"
|
||||
"field": "dateofcollection",
|
||||
"type": "date",
|
||||
"value": "2020-01-21"
|
||||
},
|
||||
{
|
||||
"field": "collectedfrom",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"openaire____::fairsharing@@@FAIRsharing.org",
|
||||
"openaire____::opendoar@@@OpenDOAR",
|
||||
"openaire____::re3data@@@Registry of Research Data Repository"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "issnPrinted",
|
||||
|
|
@ -247,6 +278,20 @@
|
|||
"type": "string",
|
||||
"value": "2579-5447"
|
||||
},
|
||||
{
|
||||
"field": "researchentitytypes",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"Research Data"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "providedproducttypes",
|
||||
"type": "array",
|
||||
"value": [
|
||||
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "jurisdiction",
|
||||
"type": "string",
|
||||
|
|
@ -266,7 +311,32 @@
|
|||
"field": "contentpolicies",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"Journal article@@@eosc:contentpolicies"
|
||||
"Taxonomic classification@@@eosc:contentpolicies",
|
||||
"Resource collection@@@eosc:contentpolicies"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "submissionpolicyurl",
|
||||
"type": "string",
|
||||
"value": null
|
||||
},
|
||||
{
|
||||
"field": "preservationpolicyurl",
|
||||
"type": "string",
|
||||
"value": "Permanent Archiving https://datadryad.org/stash/faq"
|
||||
},
|
||||
{
|
||||
"field": "researchproductaccesspolicies",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"https://100percentit.com/legal/"
|
||||
]
|
||||
},
|
||||
{
|
||||
"field": "researchproductmetadataaccesspolicies",
|
||||
"type": "array",
|
||||
"value": [
|
||||
"https://wenmr.science.uu.nl/conditions"
|
||||
]
|
||||
},
|
||||
{
|
||||
|
|
@ -283,5 +353,10 @@
|
|||
"field": "consenttermsofusedate",
|
||||
"type": "date",
|
||||
"value": "2022-03-11"
|
||||
},
|
||||
{
|
||||
"field": "lastconsenttermsofusedate",
|
||||
"type": "date",
|
||||
"value": "2022-03-11"
|
||||
}
|
||||
]
|
||||
|
|
@ -695,12 +695,6 @@ public class XmlRecordFactory implements Serializable {
|
|||
XmlSerializationUtils
|
||||
.asXmlElement("citationguidelineurl", ds.getCitationguidelineurl().getValue()));
|
||||
}
|
||||
if (ds.getQualitymanagementkind() != null) {
|
||||
metadata
|
||||
.add(
|
||||
XmlSerializationUtils
|
||||
.asXmlElement("qualitymanagementkind", ds.getQualitymanagementkind().getValue()));
|
||||
}
|
||||
if (ds.getPidsystems() != null) {
|
||||
metadata
|
||||
.add(XmlSerializationUtils.asXmlElement("pidsystems", ds.getPidsystems().getValue()));
|
||||
|
|
|
|||
2
pom.xml
2
pom.xml
|
|
@ -801,7 +801,7 @@
|
|||
<mockito-core.version>3.3.3</mockito-core.version>
|
||||
<mongodb.driver.version>3.4.2</mongodb.driver.version>
|
||||
<vtd.version>[2.12,3.0)</vtd.version>
|
||||
<dhp-schemas.version>[2.10.32]</dhp-schemas.version>
|
||||
<dhp-schemas.version>[2.11.34-eosc-SNAPSHOT]</dhp-schemas.version>
|
||||
<dnet-actionmanager-api.version>[4.0.3]</dnet-actionmanager-api.version>
|
||||
<dnet-actionmanager-common.version>[6.0.5]</dnet-actionmanager-common.version>
|
||||
<dnet-openaire-broker-common.version>[3.1.6]</dnet-openaire-broker-common.version>
|
||||
|
|
|
|||
Loading…
Reference in New Issue