forked from D-Net/dnet-hadoop
[DOIBoost] extended mapping for funder #8407
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016337a0f9
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d617c3e812
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@ -309,8 +309,6 @@ case object Crossref2Oaf {
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result
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}
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def generateAuhtor(given: String, family: String, orcid: String, index: Int): Author = {
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val a = new Author
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a.setName(given)
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@ -372,28 +370,22 @@ case object Crossref2Oaf {
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case dataset: Dataset => convertDataset(dataset)
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}
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val doisReference:List[String] = for {
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JObject(reference_json) <- json \ "reference"
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val doisReference: List[String] = for {
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JObject(reference_json) <- json \ "reference"
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JField("DOI", JString(doi_json)) <- reference_json
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} yield doi_json
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if (doisReference!= null && doisReference.nonEmpty) {
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val citation_relations:List[Relation] = generateCitationRelations(doisReference, result)
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if (doisReference != null && doisReference.nonEmpty) {
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val citation_relations: List[Relation] = generateCitationRelations(doisReference, result)
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resultList = resultList ::: citation_relations
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}
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resultList = resultList ::: List(result)
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resultList
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}
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private def createCiteRelation(source: Result, targetPid: String, targetPidType: String): List[Relation] = {
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private def createCiteRelation(source:Result, targetPid:String, targetPidType:String) :List[Relation] = {
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val targetId = IdentifierFactory.idFromPid("50",targetPidType, targetPid, true)
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val targetId = IdentifierFactory.idFromPid("50", targetPidType, targetPid, true)
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val from = new Relation
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from.setSource(source.getId)
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@ -405,7 +397,6 @@ case object Crossref2Oaf {
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from.setDataInfo(source.getDataInfo)
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from.setLastupdatetimestamp(source.getLastupdatetimestamp)
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val to = new Relation
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to.setTarget(source.getId)
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to.setSource(targetId)
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@ -416,10 +407,10 @@ case object Crossref2Oaf {
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to.setDataInfo(source.getDataInfo)
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to.setLastupdatetimestamp(source.getLastupdatetimestamp)
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List(from,to)
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List(from, to)
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}
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def generateCitationRelations(dois:List[String], result:Result):List[Relation] = {
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def generateCitationRelations(dois: List[String], result: Result): List[Relation] = {
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dois.flatMap(d => createCiteRelation(result, d, "doi"))
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}
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@ -495,6 +486,7 @@ case object Crossref2Oaf {
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case "10.13039/501100000781" =>
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generateSimpleRelationFromAward(funder, "corda_______", extractECAward)
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generateSimpleRelationFromAward(funder, "corda__h2020", extractECAward)
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generateSimpleRelationFromAward(funder, "corda_____he", extractECAward)
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case "10.13039/100000001" => generateSimpleRelationFromAward(funder, "nsf_________", a => a)
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case "10.13039/501100001665" => generateSimpleRelationFromAward(funder, "anr_________", a => a)
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case "10.13039/501100002341" => generateSimpleRelationFromAward(funder, "aka_________", a => a)
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@ -536,6 +528,34 @@ case object Crossref2Oaf {
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val targetId = getProjectId("wt__________", "1e5e62235d094afd01cd56e65112fc63")
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queue += generateRelation(sourceId, targetId, ModelConstants.IS_PRODUCED_BY)
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queue += generateRelation(targetId, sourceId, ModelConstants.PRODUCES)
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//ASAP
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case "10.13039/100018231" => generateSimpleRelationFromAward(funder, "asap________", a => a)
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//CHIST-ERA
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case "10.13039/501100001942" =>
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val targetId = getProjectId("chistera____", "1e5e62235d094afd01cd56e65112fc63")
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queue += generateRelation(sourceId, targetId, ModelConstants.IS_PRODUCED_BY)
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queue += generateRelation(targetId, sourceId, ModelConstants.PRODUCES)
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//HE
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case "10.13039/100018693" | "10.13039/100018694" | "10.13039/100019188" | "10.13039/100019180" |
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"10.13039/100018695" | "10.13039/100019185" | "10.13039/100019186" | "10.13039/100019187" =>
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generateSimpleRelationFromAward(funder, "corda_____he", extractECAward)
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//FCT
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case "10.13039/501100001871" =>
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generateSimpleRelationFromAward(funder, "fct_________", extractECAward)
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//NHMRC
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case "10.13039/501100000925" =>
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generateSimpleRelationFromAward(funder, "mhmrc_______", extractECAward)
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//NIH
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case "10.13039/100000002" =>
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generateSimpleRelationFromAward(funder, "nih_________", extractECAward)
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//NWO
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case "10.13039/501100003246" =>
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generateSimpleRelationFromAward(funder, "nwo_________", extractECAward)
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//UKRI
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case "10.13039/100014013" | "10.13039/501100000267" | "10.13039/501100000268" | "10.13039/501100000269" |
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"10.13039/501100000266" | "10.13039/501100006041" | "10.13039/501100000265" | "10.13039/501100000270" |
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"10.13039/501100013589" | "10.13039/501100000271" =>
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generateSimpleRelationFromAward(funder, "nwo_________", extractECAward)
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case _ => logger.debug("no match for " + funder.DOI.get)
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@ -114,8 +114,7 @@ class CrossrefMappingTest {
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}
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private def parseJson(input:String):JValue = {
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private def parseJson(input: String): JValue = {
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implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats
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lazy val json: json4s.JValue = JsonMethods.parse(input)
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@ -123,33 +122,37 @@ class CrossrefMappingTest {
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}
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@Test
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def testCitationRelations():Unit = {
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val json = Source.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/publication_license_embargo.json")).mkString
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def testCitationRelations(): Unit = {
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val json = Source
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.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/doiboost/crossref/publication_license_embargo.json"))
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.mkString
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assertNotNull(json)
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assertFalse(json.isEmpty)
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val result:List[Oaf] = Crossref2Oaf.convert(json)
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val result: List[Oaf] = Crossref2Oaf.convert(json)
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assertTrue(result.nonEmpty)
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val j = parseJson(json)
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val doisReference: List[String] = for {
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JObject(reference_json) <- j \ "reference"
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JObject(reference_json) <- j \ "reference"
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JField("DOI", JString(doi_json)) <- reference_json
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} yield doi_json
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val relationList:List[Relation] = result.filter(s => s.isInstanceOf[Relation]).map(r=> r.asInstanceOf[Relation]).filter(r => r.getSubRelType.equalsIgnoreCase(ModelConstants.CITATION))
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val relationList: List[Relation] = result
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.filter(s => s.isInstanceOf[Relation])
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.map(r => r.asInstanceOf[Relation])
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.filter(r => r.getSubRelType.equalsIgnoreCase(ModelConstants.CITATION))
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assertNotNull(relationList)
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assertFalse(relationList.isEmpty)
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assertEquals(doisReference.size*2, relationList.size)
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assertEquals(doisReference.size * 2, relationList.size)
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mapper.getSerializationConfig.enable(SerializationConfig.Feature.INDENT_OUTPUT)
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relationList.foreach(p => println(mapper.writeValueAsString(p)))
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}
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@Test
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