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Merge branch 'master' of code-repo.d4science.org:D-Net/dnet-hadoop

This commit is contained in:
Michele Artini 2020-09-25 09:03:09 +02:00
parent c96598aaa4 044d3a0214
commit c171fdebe1
5 changed files with 37 additions and 23 deletions
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2
dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplication.java
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@ -577,7 +577,7 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
final String lissn = StringUtils.isNotBlank(arr[2]) ? arr[2].trim() : null;
if (issn != null || eissn != null || lissn != null) {
return journal(name, issn, eissn, eissn, null, null, null, null, null, null, null, info);
return journal(name, issn, eissn, lissn, null, null, null, null, null, null, null, info);
}
}
}

4
dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/sql/queryDatasources.sql
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@ -3,7 +3,7 @@ SELECT
d.id || array_agg(distinct di.pid) AS identities,
d.officialname AS officialname,
d.englishname AS englishname,
d.contactemail AS contactemail,
d.contactemail AS contactemail,
CASE
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['openaire-cris_1.1'])
THEN
@ -85,7 +85,7 @@ SELECT
dc.officialname AS collectedfromname,
d.typology||'@@@dnet:datasource_typologies' AS datasourcetype,
'sysimport:crosswalk:entityregistry@@@dnet:provenance_actions' AS provenanceaction,
d.issn || ' @@@ ' || d.eissn || ' @@@ ' || d.lissn AS journal
concat_ws(' @@@ ', d.issn, d.eissn, d.lissn) AS journal
FROM dsm_datasources d

50
dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MigrateDbEntitiesApplicationTest.java
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@ -73,12 +73,16 @@ public class MigrateDbEntitiesApplicationTest {
final Datasource ds = (Datasource) list.get(0);
assertValidId(ds.getId());
assertValidId(ds.getCollectedfrom().get(0).getKey());
assertEquals(ds.getOfficialname().getValue(), getValueAsString("officialname", fields));
assertEquals(ds.getEnglishname().getValue(), getValueAsString("englishname", fields));
assertEquals(ds.getContactemail().getValue(), getValueAsString("contactemail", fields));
assertEquals(ds.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
assertEquals(ds.getNamespaceprefix().getValue(), getValueAsString("namespaceprefix", fields));
assertEquals(ds.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
assertEquals(getValueAsString("officialname", fields), ds.getOfficialname().getValue());
assertEquals(getValueAsString("englishname", fields), ds.getEnglishname().getValue());
assertEquals(getValueAsString("contactemail", fields), ds.getContactemail().getValue());
assertEquals(getValueAsString("websiteurl", fields), ds.getWebsiteurl().getValue());
assertEquals(getValueAsString("namespaceprefix", fields), ds.getNamespaceprefix().getValue());
assertEquals(getValueAsString("collectedfromname", fields), ds.getCollectedfrom().get(0).getValue());
assertEquals(getValueAsString("officialname", fields), ds.getJournal().getName());
assertEquals("2579-5449", ds.getJournal().getIssnPrinted());
assertEquals("2597-6540", ds.getJournal().getIssnOnline());
assertEquals(null, ds.getJournal().getIssnLinking());
}
@Test
@ -92,9 +96,11 @@ public class MigrateDbEntitiesApplicationTest {
final Project p = (Project) list.get(0);
assertValidId(p.getId());
assertValidId(p.getCollectedfrom().get(0).getKey());
assertEquals(p.getAcronym().getValue(), getValueAsString("acronym", fields));
assertEquals(p.getTitle().getValue(), getValueAsString("title", fields));
assertEquals(p.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
assertEquals(getValueAsString("acronym", fields), p.getAcronym().getValue());
assertEquals(getValueAsString("title", fields), p.getTitle().getValue());
assertEquals(getValueAsString("collectedfromname", fields), p.getCollectedfrom().get(0).getValue());
assertEquals(getValueAsFloat("fundedamount", fields), p.getFundedamount());
assertEquals(getValueAsFloat("totalcost", fields), p.getTotalcost());
}
@Test
@ -110,14 +116,14 @@ public class MigrateDbEntitiesApplicationTest {
final Organization o = (Organization) list.get(0);
assertValidId(o.getId());
assertValidId(o.getCollectedfrom().get(0).getKey());
assertEquals(o.getLegalshortname().getValue(), getValueAsString("legalshortname", fields));
assertEquals(o.getLegalname().getValue(), getValueAsString("legalname", fields));
assertEquals(o.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
assertEquals(o.getCountry().getClassid(), getValueAsString("country", fields).split("@@@")[0]);
assertEquals(o.getCountry().getClassname(), getValueAsString("country", fields).split("@@@")[0]);
assertEquals(o.getCountry().getSchemeid(), getValueAsString("country", fields).split("@@@")[1]);
assertEquals(o.getCountry().getSchemename(), getValueAsString("country", fields).split("@@@")[1]);
assertEquals(o.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
assertEquals(getValueAsString("legalshortname", fields), o.getLegalshortname().getValue());
assertEquals(getValueAsString("legalname", fields), o.getLegalname().getValue());
assertEquals(getValueAsString("websiteurl", fields), o.getWebsiteurl().getValue());
assertEquals(getValueAsString("country", fields).split("@@@")[0], o.getCountry().getClassid());
assertEquals(getValueAsString("country", fields).split("@@@")[0], o.getCountry().getClassname());
assertEquals(getValueAsString("country", fields).split("@@@")[1], o.getCountry().getSchemeid());
assertEquals(getValueAsString("country", fields).split("@@@")[1], o.getCountry().getSchemename());
assertEquals(getValueAsString("collectedfromname", fields), o.getCollectedfrom().get(0).getValue());
}
@Test
@ -322,12 +328,20 @@ public class MigrateDbEntitiesApplicationTest {
}
private String getValueAsString(final String name, final List<TypedField> fields) {
return getValueAs(name, fields);
}
private Float getValueAsFloat(final String name, final List<TypedField> fields) {
return new Float(getValueAs(name, fields).toString());
}
private <T> T getValueAs(final String name, final List<TypedField> fields) {
return fields
.stream()
.filter(f -> f.getField().equals(name))
.map(TypedField::getValue)
.filter(Objects::nonNull)
.map(o -> o.toString())
.map(o -> (T) o)
.findFirst()
.get();
}

0
dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/raw/oaf_openapc.xml Normal file
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4
dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/raw/projects_resultset_entry.json
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@ -142,12 +142,12 @@
{
"field": "totalcost",
"type": "double",
"value": null
"value": 157846
},
{
"field": "fundedamount",
"type": "double",
"value": null
"value": 157846
},
{
"field": "collectedfromid",