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Graph Dump - added method to test class to verify addition of validation date in projects for community result

This commit is contained in:
Miriam Baglioni 2021-08-09 16:36:54 +02:00
parent bd0d7bfba7
commit a90bac3bc9
1 changed files with 87 additions and 0 deletions
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87
dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/dump/UpdateProjectInfoTest.java
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@ -5,11 +5,17 @@ import java.io.IOException;
import java.nio.file.Files;
import java.nio.file.Path;
import java.util.HashMap;
import java.util.logging.Filter;
import java.util.stream.Collectors;
import eu.dnetlib.dhp.schema.dump.oaf.community.Funder;
import eu.dnetlib.dhp.schema.dump.oaf.community.Project;
import org.apache.commons.io.FileUtils;
import org.apache.spark.SparkConf;
import org.apache.spark.api.java.JavaRDD;
import org.apache.spark.api.java.JavaSparkContext;
import org.apache.spark.api.java.function.FilterFunction;
import org.apache.spark.api.java.function.MapFunction;
import org.apache.spark.sql.Encoders;
import org.apache.spark.sql.Row;
import org.apache.spark.sql.SparkSession;
@ -135,4 +141,85 @@ public class UpdateProjectInfoTest {
resultExplodedProvenance.show(false);
}
@Test
public void testValidatedRelation() throws Exception{
final String sourcePath = getClass()
.getResource("/eu/dnetlib/dhp/oa/graph/dump/addProjectInfo")
.getPath();
SparkUpdateProjectInfo.main(new String[] {
"-isSparkSessionManaged", Boolean.FALSE.toString(),
"-preparedInfoPath", sourcePath + "/preparedInfoValidated",
"-outputPath", workingDir.toString() + "/result",
"-sourcePath", sourcePath + "/publication_extendedmodel"
});
final JavaSparkContext sc = JavaSparkContext.fromSparkContext(spark.sparkContext());
JavaRDD<CommunityResult> tmp = sc
.textFile(workingDir.toString() + "/result")
.map(item -> OBJECT_MAPPER.readValue(item, CommunityResult.class));
org.apache.spark.sql.Dataset<CommunityResult> verificationDataset = spark
.createDataset(tmp.rdd(), Encoders.bean(CommunityResult.class));
verificationDataset.show(false);
Assertions.assertEquals(2, verificationDataset.count());
verificationDataset.createOrReplaceTempView("dataset");
String query = "select id, MyT.code code, MyT.title title, MyT.funder.name funderName, MyT.funder.shortName funderShortName, "
+
"MyT.funder.jurisdiction funderJurisdiction, MyT.funder.fundingStream fundingStream, MyT.validated "
+ "from dataset " +
"lateral view explode(projects) p as MyT ";
org.apache.spark.sql.Dataset<Row> resultExplodedProvenance = spark.sql(query);
Assertions.assertEquals(2, resultExplodedProvenance.count());
resultExplodedProvenance.show(false);
Assertions
.assertEquals(
2,
resultExplodedProvenance.filter("id = '50|pensoft_____::00ea4a1cd53806a97d62ea6bf268f2a2'").count());
Assertions
.assertEquals(
1,
resultExplodedProvenance
.filter("id = '50|pensoft_____::00ea4a1cd53806a97d62ea6bf268f2a2' and code = '123455'")
.count());
Assertions
.assertEquals(
1,
resultExplodedProvenance
.filter("id = '50|pensoft_____::00ea4a1cd53806a97d62ea6bf268f2a2' and code = '119027'")
.count());
Project project = verificationDataset
.map((MapFunction<CommunityResult, Project>) cr -> cr.getProjects().stream().filter(p -> p.getValidated() != null).collect(Collectors.toList()).get(0)
, Encoders.bean(Project.class)).first();
Assertions.assertTrue(project.getFunder().getName().equals("Academy of Finland"));
Assertions.assertTrue(project.getFunder().getShortName().equals("AKA"));
Assertions.assertTrue(project.getFunder().getJurisdiction().equals("FI"));
Assertions.assertTrue(project.getFunder().getFundingStream() == null);
Assertions.assertTrue(project.getValidated().getValidationDate().equals("2021-08-06"));
project = verificationDataset
.map((MapFunction<CommunityResult, Project>) cr -> cr.getProjects().stream().filter(p -> p.getValidated() == null).collect(Collectors.toList()).get(0)
, Encoders.bean(Project.class)).first();
Assertions.assertTrue(project.getFunder().getName().equals("European Commission"));
Assertions.assertTrue(project.getFunder().getShortName().equals("EC"));
Assertions.assertTrue(project.getFunder().getJurisdiction().equals("EU"));
Assertions.assertTrue(project.getFunder().getFundingStream().equals("H2020"));
}
}