forked from D-Net/dnet-hadoop
code formatting
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@ -7,7 +7,6 @@ import java.io.IOException;
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import java.io.Serializable;
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import java.io.Serializable;
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import java.util.*;
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import java.util.*;
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import eu.dnetlib.dhp.schema.oaf.utils.*;
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import org.apache.commons.cli.ParseException;
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import org.apache.commons.cli.ParseException;
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import org.apache.commons.io.IOUtils;
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import org.apache.commons.io.IOUtils;
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import org.apache.hadoop.io.Text;
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import org.apache.hadoop.io.Text;
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@ -30,6 +29,7 @@ import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.schema.action.AtomicAction;
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import eu.dnetlib.dhp.schema.action.AtomicAction;
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import eu.dnetlib.dhp.schema.common.ModelConstants;
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import eu.dnetlib.dhp.schema.common.ModelConstants;
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import eu.dnetlib.dhp.schema.oaf.*;
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import eu.dnetlib.dhp.schema.oaf.*;
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import eu.dnetlib.dhp.schema.oaf.utils.*;
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import eu.dnetlib.dhp.utils.DHPUtils;
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import eu.dnetlib.dhp.utils.DHPUtils;
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import scala.Tuple2;
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import scala.Tuple2;
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@ -31,9 +31,7 @@ case class mappingAuthor(
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affiliation: Option[mappingAffiliation]
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affiliation: Option[mappingAffiliation]
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) {}
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) {}
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case class funderInfo(id:String,uri:String, name:String,synonym:List[String] ) {}
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case class funderInfo(id: String, uri: String, name: String, synonym: List[String]) {}
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case class mappingFunder(name: String, DOI: Option[String], award: Option[List[String]]) {}
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case class mappingFunder(name: String, DOI: Option[String], award: Option[List[String]]) {}
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@ -41,7 +39,9 @@ case object Crossref2Oaf {
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val logger: Logger = LoggerFactory.getLogger(Crossref2Oaf.getClass)
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val logger: Logger = LoggerFactory.getLogger(Crossref2Oaf.getClass)
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val irishFunder: List[funderInfo] = {
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val irishFunder: List[funderInfo] = {
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val s = Source.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/dhp/doiboost/crossref/irish_funder.json")).mkString
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val s = Source
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.fromInputStream(getClass.getResourceAsStream("/eu/dnetlib/dhp/doiboost/crossref/irish_funder.json"))
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.mkString
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implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats
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implicit lazy val formats: DefaultFormats.type = org.json4s.DefaultFormats
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lazy val json: org.json4s.JValue = parse(s)
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lazy val json: org.json4s.JValue = parse(s)
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json.extract[List[funderInfo]]
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json.extract[List[funderInfo]]
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@ -100,9 +100,11 @@ case object Crossref2Oaf {
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"report" -> "0017 Report"
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"report" -> "0017 Report"
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)
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)
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def getIrishId(doi:String):Option[String] = {
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def getIrishId(doi: String): Option[String] = {
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val id =doi.split("/").last
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val id = doi.split("/").last
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irishFunder.find(f => id.equalsIgnoreCase(f.id) || (f.synonym.nonEmpty && f.synonym.exists(s => s.equalsIgnoreCase(id)))).map(f => f.id)
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irishFunder
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.find(f => id.equalsIgnoreCase(f.id) || (f.synonym.nonEmpty && f.synonym.exists(s => s.equalsIgnoreCase(id))))
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.map(f => f.id)
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}
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}
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def mappingResult(result: Result, json: JValue, cobjCategory: String): Result = {
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def mappingResult(result: Result, json: JValue, cobjCategory: String): Result = {
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@ -50,7 +50,7 @@ class CrossrefMappingTest {
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}
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}
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}
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}
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def checkRelation(generatedOAF: List[Oaf]): Unit = {
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def checkRelation(generatedOAF: List[Oaf]): Unit = {
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val rels: List[Relation] =
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val rels: List[Relation] =
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generatedOAF.filter(p => p.isInstanceOf[Relation]).asInstanceOf[List[Relation]]
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generatedOAF.filter(p => p.isInstanceOf[Relation]).asInstanceOf[List[Relation]]
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