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[Enrichment country] fixed issues with parameters and workflow args

This commit is contained in:
Miriam Baglioni 2022-03-23 17:20:23 +01:00
parent f10066547b
commit 7b8f85692e
2 changed files with 4 additions and 11 deletions
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6
dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/countrypropagation/input_countrypropagation_parameters.json
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@ -5,12 +5,6 @@
"paramDescription": "the path of the sequencial file to read", "paramDescription": "the path of the sequencial file to read",
"paramRequired": true "paramRequired": true
}, },
{
"paramName":"h",
"paramLongName":"hive_metastore_uris",
"paramDescription": "the hive metastore uris",
"paramRequired": false
},
{ {
"paramName":"tn", "paramName":"tn",
"paramLongName":"resultTableName", "paramLongName":"resultTableName",

9
dhp-workflows/dhp-enrichment/src/main/resources/eu/dnetlib/dhp/countrypropagation/oozie_app/workflow.xml
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@ -110,7 +110,6 @@
<arg>--sourcePath</arg><arg>${sourcePath}</arg> <arg>--sourcePath</arg><arg>${sourcePath}</arg>
<arg>--whitelist</arg><arg>${whitelist}</arg> <arg>--whitelist</arg><arg>${whitelist}</arg>
<arg>--allowedtypes</arg><arg>${allowedtypes}</arg> <arg>--allowedtypes</arg><arg>${allowedtypes}</arg>
<arg>--hive_metastore_uris</arg><arg>${hive_metastore_uris}</arg>
<arg>--outputPath</arg><arg>${workingDir}/preparedInfo</arg> <arg>--outputPath</arg><arg>${workingDir}/preparedInfo</arg>
</spark> </spark>
<ok to="fork_join_prepare_result_country"/> <ok to="fork_join_prepare_result_country"/>
@ -146,7 +145,7 @@
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${sourcePath}/publication</arg> <arg>--sourcePath</arg><arg>${sourcePath}/publication</arg>
<arg>--outputPath</arg><arg>${workingDir}/publication</arg> <arg>--outputPath</arg><arg>${workingDir}/publication</arg>
<arg>--hive_metastore_uris</arg><arg>${hive_metastore_uris}</arg> <arg>--workingPath</arg><arg>${workingDir}/workingP</arg>
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
<arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg> <arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg>
</spark> </spark>
@ -176,7 +175,7 @@
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${sourcePath}/dataset</arg> <arg>--sourcePath</arg><arg>${sourcePath}/dataset</arg>
<arg>--outputPath</arg><arg>${workingDir}/dataset</arg> <arg>--outputPath</arg><arg>${workingDir}/dataset</arg>
<arg>--hive_metastore_uris</arg><arg>${hive_metastore_uris}</arg> <arg>--workingPath</arg><arg>${workingDir}/workingD</arg>
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
<arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg> <arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg>
</spark> </spark>
@ -206,7 +205,7 @@
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg> <arg>--sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg>
<arg>--outputPath</arg><arg>${workingDir}/otherresearchproduct</arg> <arg>--outputPath</arg><arg>${workingDir}/otherresearchproduct</arg>
<arg>--hive_metastore_uris</arg><arg>${hive_metastore_uris}</arg> <arg>--workingPath</arg><arg>${workingDir}/workingO</arg>
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
<arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg> <arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg>
</spark> </spark>
@ -236,7 +235,7 @@
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${sourcePath}/software</arg> <arg>--sourcePath</arg><arg>${sourcePath}/software</arg>
<arg>--outputPath</arg><arg>${workingDir}/software</arg> <arg>--outputPath</arg><arg>${workingDir}/software</arg>
<arg>--hive_metastore_uris</arg><arg>${hive_metastore_uris}</arg> <arg>--workingPath</arg><arg>${workingDir}/workingS</arg>
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
<arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg> <arg>--preparedInfoPath</arg><arg>${workingDir}/preparedInfo</arg>
</spark> </spark>