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added result_orcid, result_project provenance, issn in datasources

This commit is contained in:
Antonis Lempesis 2021-07-28 12:28:04 +03:00
parent 1a28a69cac
commit 4a9741825d
5 changed files with 22 additions and 39 deletions
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20
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step13.sql
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@ -57,12 +57,14 @@ UNION ALL
SELECT * FROM ${stats_db_name}.software_sources SELECT * FROM ${stats_db_name}.software_sources
UNION ALL UNION ALL
SELECT * FROM ${stats_db_name}.otherresearchproduct_sources; SELECT * FROM ${stats_db_name}.otherresearchproduct_sources;
--
-- ANALYZE TABLE ${stats_db_name}.publication_sources COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.publication_sources COMPUTE STATISTICS FOR COLUMNS; create table ${stats_db_name}.result_orcid as
-- ANALYZE TABLE ${stats_db_name}.dataset_sources COMPUTE STATISTICS; select distinct res.id, regexp_replace(res.orcid, 'http://orcid.org/' ,'') as orcid
-- ANALYZE TABLE ${stats_db_name}.dataset_sources COMPUTE STATISTICS FOR COLUMNS; from (
-- ANALYZE TABLE ${stats_db_name}.software_sources COMPUTE STATISTICS; SELECT substr(res.id, 4) as id, auth_pid.value as orcid
-- ANALYZE TABLE ${stats_db_name}.software_sources COMPUTE STATISTICS FOR COLUMNS; FROM ${openaire_db_name}.result res
-- ANALYZE TABLE ${stats_db_name}.otherresearchproduct_sources COMPUTE STATISTICS; LATERAL VIEW explode(author) a as auth
-- ANALYZE TABLE ${stats_db_name}.otherresearchproduct_sources COMPUTE STATISTICS FOR COLUMNS; LATERAL VIEW explode(auth.pid) ap as auth_pid
LATERAL VIEW explode(auth.pid.qualifier.classid) apt as author_pid_type
WHERE res.datainfo.deletedbyinference = FALSE and res.datainfo.invisible = FALSE and author_pid_type = 'orcid') as res

11
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step15.sql
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@ -33,13 +33,4 @@ select * from ${stats_db_name}.dataset_refereed
union all union all
select * from ${stats_db_name}.software_refereed select * from ${stats_db_name}.software_refereed
union all union all
select * from ${stats_db_name}.otherresearchproduct_refereed; select * from ${stats_db_name}.otherresearchproduct_refereed;
--
-- ANALYZE TABLE ${stats_db_name}.publication_refereed COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.publication_refereed COMPUTE STATISTICS FOR COLUMNS;
-- ANALYZE TABLE ${stats_db_name}.dataset_refereed COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.dataset_refereed COMPUTE STATISTICS FOR COLUMNS;
-- ANALYZE TABLE ${stats_db_name}.software_refereed COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.software_refereed COMPUTE STATISTICS FOR COLUMNS;
-- ANALYZE TABLE ${stats_db_name}.otherresearchproduct_refereed COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.otherresearchproduct_refereed COMPUTE STATISTICS FOR COLUMNS;

2
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step6.sql
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@ -13,7 +13,7 @@ WHERE r.reltype = 'projectOrganization'
and r.datainfo.deletedbyinference = false; and r.datainfo.deletedbyinference = false;
CREATE TABLE ${stats_db_name}.project_results AS CREATE TABLE ${stats_db_name}.project_results AS
SELECT substr(r.target, 4) AS id, substr(r.source, 4) AS result SELECT substr(r.target, 4) AS id, substr(r.source, 4) AS result, r.datainfo.provenanceaction.classname as provenance
FROM ${openaire_db_name}.relation r FROM ${openaire_db_name}.relation r
WHERE r.reltype = 'resultProject' WHERE r.reltype = 'resultProject'
and r.datainfo.deletedbyinference = false; and r.datainfo.deletedbyinference = false;

9
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step7.sql
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@ -130,12 +130,7 @@ WHERE r.reltype = 'resultOrganization'
and r.datainfo.deletedbyinference = false; and r.datainfo.deletedbyinference = false;
CREATE TABLE ${stats_db_name}.result_projects AS CREATE TABLE ${stats_db_name}.result_projects AS
select pr.result AS id, pr.id AS project, datediff(p.enddate, p.startdate) AS daysfromend select pr.result AS id, pr.id AS project, datediff(p.enddate, p.startdate) AS daysfromend, pr.provenance as provenance
FROM ${stats_db_name}.result r FROM ${stats_db_name}.result r
JOIN ${stats_db_name}.project_results pr ON r.id = pr.result JOIN ${stats_db_name}.project_results pr ON r.id = pr.result
JOIN ${stats_db_name}.project_tmp p ON p.id = pr.id; JOIN ${stats_db_name}.project_tmp p ON p.id = pr.id;
-- ANALYZE TABLE ${stats_db_name}.result_organization COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.result_organization COMPUTE STATISTICS FOR COLUMNS;
-- ANALYZE TABLE ${stats_db_name}.result_projects COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.result_projects COMPUTE STATISTICS FOR COLUMNS;

19
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step8.sql
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@ -17,7 +17,9 @@ CREATE TABLE ${stats_db_name}.datasource_tmp
`latitude` STRING, `latitude` STRING,
`longitude` STRING, `longitude` STRING,
`websiteurl` STRING, `websiteurl` STRING,
`compatibility` STRING `compatibility` STRING,
issn_printed STRING,
issn_online STRING
) CLUSTERED BY (id) INTO 100 buckets stored AS orc tblproperties ('transactional' = 'true'); ) CLUSTERED BY (id) INTO 100 buckets stored AS orc tblproperties ('transactional' = 'true');
-- Insert statement that takes into account the piwik_id of the openAIRE graph -- Insert statement that takes into account the piwik_id of the openAIRE graph
@ -32,7 +34,9 @@ SELECT substr(d1.id, 4) AS id,
d1.latitude.value AS latitude, d1.latitude.value AS latitude,
d1.longitude.value AS longitude, d1.longitude.value AS longitude,
d1.websiteurl.value AS websiteurl, d1.websiteurl.value AS websiteurl,
d1.openairecompatibility.classid AS compatibility d1.openairecompatibility.classid AS compatibility,
d1.journal.issnprinted AS issn_printed,
d1.journal.issnonline AS issn_online
FROM ${openaire_db_name}.datasource d1 FROM ${openaire_db_name}.datasource d1
LEFT OUTER JOIN LEFT OUTER JOIN
(SELECT id, split(originalidd, '\\:')[1] as piwik_id (SELECT id, split(originalidd, '\\:')[1] as piwik_id
@ -97,13 +101,4 @@ where d.datainfo.deletedbyinference = false;
CREATE OR REPLACE VIEW ${stats_db_name}.datasource_results AS CREATE OR REPLACE VIEW ${stats_db_name}.datasource_results AS
SELECT datasource AS id, id AS result SELECT datasource AS id, id AS result
FROM ${stats_db_name}.result_datasources; FROM ${stats_db_name}.result_datasources;
-- ANALYZE TABLE ${stats_db_name}.datasource_tmp COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.datasource_tmp COMPUTE STATISTICS FOR COLUMNS;
-- ANALYZE TABLE ${stats_db_name}.datasource_languages COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.datasource_languages COMPUTE STATISTICS FOR COLUMNS;
-- ANALYZE TABLE ${stats_db_name}.datasource_oids COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.datasource_oids COMPUTE STATISTICS FOR COLUMNS;
-- ANALYZE TABLE ${stats_db_name}.datasource_organizations COMPUTE STATISTICS;
-- ANALYZE TABLE ${stats_db_name}.datasource_organizations COMPUTE STATISTICS FOR COLUMNS;