forked from D-Net/dnet-hadoop
added properties file in the forlder for the workflow of orcid propagation. Changes the path in the classes implementing the propagationchanged the path to the parameter file in the class for entitytoorganization propagation
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89f269c7f4
commit
009730b3d1
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@ -31,7 +31,7 @@ public class PrepareResultOrcidAssociationStep1 {
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.toString(
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.toString(
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PrepareResultOrcidAssociationStep1.class
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PrepareResultOrcidAssociationStep1.class
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.getResourceAsStream(
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.getResourceAsStream(
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"/eu/dnetlib/dhp/orcidtoresultfromsemrel/input_prepareorcidtoresult_parameters.json"));
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"/eu/dnetlib/dhp/wf/subworkflows/orcidtoresultfromsemrel/input_prepareorcidtoresult_parameters.json"));
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConf);
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConf);
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parser.parseArgument(args);
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parser.parseArgument(args);
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@ -29,7 +29,7 @@ public class PrepareResultOrcidAssociationStep2 {
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.toString(
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.toString(
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PrepareResultOrcidAssociationStep2.class
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PrepareResultOrcidAssociationStep2.class
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.getResourceAsStream(
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.getResourceAsStream(
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"/eu/dnetlib/dhp/orcidtoresultfromsemrel/input_prepareorcidtoresult_parameters2.json"));
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"/eu/dnetlib/dhp/wf/subworkflows/orcidtoresultfromsemrel/input_prepareorcidtoresult_parameters2.json"));
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
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@ -36,7 +36,7 @@ public class SparkOrcidToResultFromSemRelJob {
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.toString(
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.toString(
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SparkOrcidToResultFromSemRelJob.class
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SparkOrcidToResultFromSemRelJob.class
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.getResourceAsStream(
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.getResourceAsStream(
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"/eu/dnetlib/dhp/orcidtoresultfromsemrel/input_orcidtoresult_parameters.json"));
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"/eu/dnetlib/dhp/wf/subworkflows/orcidtoresultfromsemrel/input_orcidtoresult_parameters.json"));
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(jsonConfiguration);
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parser.parseArgument(args);
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parser.parseArgument(args);
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@ -0,0 +1,44 @@
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[
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{
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"paramName":"s",
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"paramLongName":"sourcePath",
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"paramDescription": "the path of the sequencial file to read",
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"paramRequired": true
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},
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{
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"paramName":"sg",
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"paramLongName":"saveGraph",
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"paramDescription": "true if the new version of the graph must be saved",
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"paramRequired": false
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},
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{
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"paramName": "out",
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"paramLongName": "outputPath",
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"paramDescription": "the path used to store temporary output files",
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"paramRequired": true
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},
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{
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"paramName": "ssm",
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"paramLongName": "isSparkSessionManaged",
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"paramDescription": "true if the spark session is managed, false otherwise",
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"paramRequired": false
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},
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{
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"paramName":"tn",
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"paramLongName":"resultTableName",
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"paramDescription": "the name of the result table we are currently working on",
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"paramRequired": true
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},
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{
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"paramName":"pu",
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"paramLongName":"possibleUpdatesPath",
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"paramDescription": "the path the the association resultId orcid author list can be found",
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"paramRequired": true
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},
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{
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"paramName":"test",
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"paramLongName":"isTest",
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"paramDescription": "true if it is executing a test",
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"paramRequired": false
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}
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]
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@ -0,0 +1,38 @@
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[
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{
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"paramName":"s",
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"paramLongName":"sourcePath",
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"paramDescription": "the path of the sequencial file to read",
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"paramRequired": true
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},
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{
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"paramName":"as",
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"paramLongName":"allowedsemrels",
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"paramDescription": "the allowed sematinc relations for propagation",
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"paramRequired": true
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},
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{
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"paramName":"h",
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"paramLongName":"hive_metastore_uris",
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"paramDescription": "the hive metastore uris",
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"paramRequired": true
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},
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{
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"paramName": "out",
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"paramLongName": "outputPath",
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"paramDescription": "the path used to store temporary output files",
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"paramRequired": true
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},
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{
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"paramName": "ssm",
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"paramLongName": "isSparkSessionManaged",
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"paramDescription": "true if the spark session is managed, false otherwise",
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"paramRequired": false
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},
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{
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"paramName":"tn",
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"paramLongName":"resultTableName",
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"paramDescription": "the name of the result table we are currently working on",
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"paramRequired": true
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}
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]
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@ -0,0 +1,20 @@
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[
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{
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"paramName":"s",
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"paramLongName":"sourcePath",
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"paramDescription": "the path of the sequencial file to read",
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"paramRequired": true
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},
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{
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"paramName": "out",
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"paramLongName": "outputPath",
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"paramDescription": "the path used to store temporary output files",
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"paramRequired": true
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},
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{
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"paramName": "ssm",
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"paramLongName": "isSparkSessionManaged",
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"paramDescription": "true if the spark session is managed, false otherwise",
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"paramRequired": false
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}
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]
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