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final versione of the wf to get the dump of results associated to at least one funder per funder

This commit is contained in:
Miriam Baglioni 2020-11-24 14:46:34 +01:00
parent c167a18057
commit 7e14452a87
1 changed files with 12 additions and 4 deletions
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16
dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/dump/funderresults/oozie_app/workflow.xml
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@ -182,7 +182,7 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${sourcePath}/dataset</arg> <arg>--sourcePath</arg><arg>${sourcePath}/dataset</arg>
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
<arg>--outputPath</arg><arg>${workingDir}/result/dataset</arg> <arg>--outputPath</arg><arg>${workingDir}/result/dataset</arg>
<arg>--relationPath</arg><arg>${sourcePath}/relation</arg> <arg>--relationPath</arg><arg>${sourcePath}/relation</arg>
</spark> </spark>
@ -208,7 +208,7 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg> <arg>--sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg>
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
<arg>--outputPath</arg><arg>${workingDir}/result/otherresearchproduct</arg> <arg>--outputPath</arg><arg>${workingDir}/result/otherresearchproduct</arg>
<arg>--relationPath</arg><arg>${sourcePath}/relation</arg> <arg>--relationPath</arg><arg>${sourcePath}/relation</arg>
</spark> </spark>
@ -234,7 +234,7 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${sourcePath}/software</arg> <arg>--sourcePath</arg><arg>${sourcePath}/software</arg>
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
<arg>--outputPath</arg><arg>${workingDir}/result/software</arg> <arg>--outputPath</arg><arg>${workingDir}/result/software</arg>
<arg>--relationPath</arg><arg>${sourcePath}/relation</arg> <arg>--relationPath</arg><arg>${sourcePath}/relation</arg>
</spark> </spark>
@ -269,9 +269,11 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/publication</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/publication</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/publication</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Publication</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/publication</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/publication</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
<arg>--dumpType</arg><arg>funder</arg>
</spark> </spark>
<ok to="join_dump"/> <ok to="join_dump"/>
<error to="Kill"/> <error to="Kill"/>
@ -295,9 +297,11 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/dataset</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/dataset</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/dataset</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Dataset</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/dataset</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/dataset</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
<arg>--dumpType</arg><arg>funder</arg>
</spark> </spark>
<ok to="join_dump"/> <ok to="join_dump"/>
<error to="Kill"/> <error to="Kill"/>
@ -321,9 +325,11 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/otherresearchproduct</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/otherresearchproduct</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/otherresearchproduct</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.OtherResearchProduct</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/otherresearchproduct</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/otherresearchproduct</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
<arg>--dumpType</arg><arg>funder</arg>
</spark> </spark>
<ok to="join_dump"/> <ok to="join_dump"/>
<error to="Kill"/> <error to="Kill"/>
@ -347,9 +353,11 @@
--conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir} --conf spark.sql.warehouse.dir=${sparkSqlWarehouseDir}
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/result/software</arg> <arg>--sourcePath</arg><arg>${workingDir}/result/software</arg>
<!-- <arg>&#45;&#45;sourcePath</arg><arg>${sourcePath}/software</arg>-->
<arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg> <arg>--resultTableName</arg><arg>eu.dnetlib.dhp.schema.oaf.Software</arg>
<arg>--outputPath</arg><arg>${workingDir}/dump/software</arg> <arg>--outputPath</arg><arg>${workingDir}/dump/software</arg>
<arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg> <arg>--communityMapPath</arg><arg>${workingDir}/communityMap</arg>
<arg>--dumpType</arg><arg>funder</arg>
</spark> </spark>
<ok to="join_dump"/> <ok to="join_dump"/>
<error to="Kill"/> <error to="Kill"/>
@ -508,7 +516,7 @@
</spark-opts> </spark-opts>
<arg>--sourcePath</arg><arg>${workingDir}/ext</arg> <arg>--sourcePath</arg><arg>${workingDir}/ext</arg>
<arg>--outputPath</arg><arg>${outputPath}</arg> <arg>--outputPath</arg><arg>${outputPath}</arg>
<arg>--relationPath</arg><arg>${sourcePath}/relation</arg> <arg>--relationPath</arg><arg>${sourcePath}</arg>
</spark> </spark>
<ok to="End"/> <ok to="End"/>
<error to="Kill"/> <error to="Kill"/>