From a41e0cb64899dc3673dd119e93a2550b4b8c70ec Mon Sep 17 00:00:00 2001 From: "michele.artini" Date: Thu, 11 Jun 2020 12:28:34 +0200 Subject: [PATCH 1/5] missing landingPage urls in instances --- .../eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java | 13 +++++++++++-- 1 file changed, 11 insertions(+), 2 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java index e6a744fc0..7ff483aff 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/OdfToOafMapper.java @@ -138,9 +138,16 @@ public class OdfToOafMapper extends AbstractMdRecordToOafMapper { for (final Object o : doc.selectNodes("//datacite:alternateIdentifier[@alternateIdentifierType='URL']")) { url.add(((Node) o).getText().trim()); } + for (final Object o : doc + .selectNodes("//datacite:alternateIdentifier[@alternateIdentifierType='landingPage']")) { + url.add(((Node) o).getText().trim()); + } for (final Object o : doc.selectNodes("//datacite:identifier[@identifierType='URL']")) { url.add(((Node) o).getText().trim()); } + for (final Object o : doc.selectNodes("//datacite:identifier[@identifierType='landingPage']")) { + url.add(((Node) o).getText().trim()); + } for (final Object o : doc.selectNodes("//datacite:alternateIdentifier[@alternateIdentifierType='DOI']")) { url.add(HTTP_DX_DOI_PREIFX + ((Node) o).getText().trim()); } @@ -379,11 +386,13 @@ public class OdfToOafMapper extends AbstractMdRecordToOafMapper { res .addAll( prepareListStructPropsWithValidQualifier( - doc, "//datacite:identifier[@identifierType != 'URL']", "@identifierType", DNET_PID_TYPES, info)); + doc, "//datacite:identifier[@identifierType != 'URL' and @identifierType != 'landingPage']", + "@identifierType", DNET_PID_TYPES, info)); res .addAll( prepareListStructPropsWithValidQualifier( - doc, "//datacite:alternateIdentifier[@alternateIdentifierType != 'URL']", + doc, + "//datacite:alternateIdentifier[@alternateIdentifierType != 'URL' and @alternateIdentifierType != 'landingPage']", "@alternateIdentifierType", DNET_PID_TYPES, info)); return res; } From 48959e9a1710f627a902dc986e07e180193edb9e Mon Sep 17 00:00:00 2001 From: "michele.artini" Date: Thu, 11 Jun 2020 14:24:02 +0200 Subject: [PATCH 2/5] orcid events --- .../simple/EnrichMissingAuthorOrcid.java | 49 ++++++++++++++----- 1 file changed, 38 insertions(+), 11 deletions(-) diff --git a/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java b/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java index 1226aaf45..14021480d 100644 --- a/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java +++ b/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java @@ -1,41 +1,68 @@ package eu.dnetlib.dhp.broker.oa.matchers.simple; -import java.util.Arrays; +import java.util.ArrayList; import java.util.List; - -import org.apache.commons.lang3.tuple.Pair; +import java.util.Set; +import java.util.stream.Collectors; import eu.dnetlib.dhp.broker.model.Topic; import eu.dnetlib.dhp.broker.oa.matchers.UpdateMatcher; import eu.dnetlib.dhp.broker.oa.util.UpdateInfo; import eu.dnetlib.dhp.broker.oa.util.aggregators.withRels.ResultWithRelations; +import eu.dnetlib.dhp.schema.oaf.Author; +import eu.dnetlib.dhp.schema.oaf.StructuredProperty; import eu.dnetlib.pace.config.DedupConfig; -public class EnrichMissingAuthorOrcid extends UpdateMatcher> { +public class EnrichMissingAuthorOrcid extends UpdateMatcher { public EnrichMissingAuthorOrcid() { super(true); } @Override - protected List>> findUpdates(final ResultWithRelations source, + protected List> findUpdates(final ResultWithRelations source, final ResultWithRelations target, final DedupConfig dedupConfig) { - // TODO - // return Arrays.asList(new EnrichMissingAbstract("xxxxxxx", 0.9f)); - return Arrays.asList(); + + final Set existingOrcids = target + .getResult() + .getAuthor() + .stream() + .map(Author::getPid) + .flatMap(List::stream) + .filter(pid -> pid.getQualifier().getClassid().equalsIgnoreCase("orcid")) + .map(pid -> pid.getValue()) + .collect(Collectors.toSet()); + + final List> list = new ArrayList<>(); + + for (final Author author : source.getResult().getAuthor()) { + final String name = author.getFullname(); + + for (final StructuredProperty pid : author.getPid()) { + if (pid.getQualifier().getClassid().equalsIgnoreCase("orcid") + && !existingOrcids.contains(pid.getValue())) { + list + .add( + generateUpdateInfo(name + " [ORCID: " + pid.getValue() + "]", source, target, dedupConfig)); + ; + } + } + } + + return list; } - public UpdateInfo> generateUpdateInfo(final Pair highlightValue, + public UpdateInfo generateUpdateInfo(final String highlightValue, final ResultWithRelations source, final ResultWithRelations target, final DedupConfig dedupConfig) { return new UpdateInfo<>( Topic.ENRICH_MISSING_AUTHOR_ORCID, highlightValue, source, target, - (p, pair) -> p.getCreators().add(pair.getLeft() + " - ORCID: " + pair.getRight()), - pair -> pair.getLeft() + "::" + pair.getRight(), + (p, aut) -> p.getCreators().add(aut), + aut -> aut, dedupConfig); } } From c2e1b66e83b6bda2cdf863a1c10e6e02411baea1 Mon Sep 17 00:00:00 2001 From: "michele.artini" Date: Thu, 11 Jun 2020 14:28:03 +0200 Subject: [PATCH 3/5] Revert "orcid events" This reverts commit 48959e9a1710f627a902dc986e07e180193edb9e. --- .../simple/EnrichMissingAuthorOrcid.java | 49 +++++-------------- 1 file changed, 11 insertions(+), 38 deletions(-) diff --git a/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java b/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java index 14021480d..1226aaf45 100644 --- a/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java +++ b/dhp-workflows/dhp-broker-events/src/main/java/eu/dnetlib/dhp/broker/oa/matchers/simple/EnrichMissingAuthorOrcid.java @@ -1,68 +1,41 @@ package eu.dnetlib.dhp.broker.oa.matchers.simple; -import java.util.ArrayList; +import java.util.Arrays; import java.util.List; -import java.util.Set; -import java.util.stream.Collectors; + +import org.apache.commons.lang3.tuple.Pair; import eu.dnetlib.dhp.broker.model.Topic; import eu.dnetlib.dhp.broker.oa.matchers.UpdateMatcher; import eu.dnetlib.dhp.broker.oa.util.UpdateInfo; import eu.dnetlib.dhp.broker.oa.util.aggregators.withRels.ResultWithRelations; -import eu.dnetlib.dhp.schema.oaf.Author; -import eu.dnetlib.dhp.schema.oaf.StructuredProperty; import eu.dnetlib.pace.config.DedupConfig; -public class EnrichMissingAuthorOrcid extends UpdateMatcher { +public class EnrichMissingAuthorOrcid extends UpdateMatcher> { public EnrichMissingAuthorOrcid() { super(true); } @Override - protected List> findUpdates(final ResultWithRelations source, + protected List>> findUpdates(final ResultWithRelations source, final ResultWithRelations target, final DedupConfig dedupConfig) { - - final Set existingOrcids = target - .getResult() - .getAuthor() - .stream() - .map(Author::getPid) - .flatMap(List::stream) - .filter(pid -> pid.getQualifier().getClassid().equalsIgnoreCase("orcid")) - .map(pid -> pid.getValue()) - .collect(Collectors.toSet()); - - final List> list = new ArrayList<>(); - - for (final Author author : source.getResult().getAuthor()) { - final String name = author.getFullname(); - - for (final StructuredProperty pid : author.getPid()) { - if (pid.getQualifier().getClassid().equalsIgnoreCase("orcid") - && !existingOrcids.contains(pid.getValue())) { - list - .add( - generateUpdateInfo(name + " [ORCID: " + pid.getValue() + "]", source, target, dedupConfig)); - ; - } - } - } - - return list; + // TODO + // return Arrays.asList(new EnrichMissingAbstract("xxxxxxx", 0.9f)); + return Arrays.asList(); } - public UpdateInfo generateUpdateInfo(final String highlightValue, + public UpdateInfo> generateUpdateInfo(final Pair highlightValue, final ResultWithRelations source, final ResultWithRelations target, final DedupConfig dedupConfig) { return new UpdateInfo<>( Topic.ENRICH_MISSING_AUTHOR_ORCID, highlightValue, source, target, - (p, aut) -> p.getCreators().add(aut), - aut -> aut, + (p, pair) -> p.getCreators().add(pair.getLeft() + " - ORCID: " + pair.getRight()), + pair -> pair.getLeft() + "::" + pair.getRight(), dedupConfig); } } From 2a4f65795f981faeac358875f89ce450e905b88f Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Mon, 15 Jun 2020 18:32:24 +0200 Subject: [PATCH 4/5] WIP: graph cleaner implementation --- .../dhp/oa/graph/raw/common/Vocabulary.java | 2 +- .../oa/graph/raw/common/VocabularyGroup.java | 9 +- .../oa/graph/clean/CleaningFunctionTest.java | 4 +- .../eu/dnetlib/dhp/oa/graph/clean/result.json | 8 +- .../dnetlib/dhp/oa/graph/clean/synonyms.txt | 1592 ++++++++--------- .../eu/dnetlib/dhp/oa/graph/clean/terms.txt | 1197 +++++++------ 6 files changed, 1400 insertions(+), 1412 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/Vocabulary.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/Vocabulary.java index ffa64861c..9bf198c8b 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/Vocabulary.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/Vocabulary.java @@ -61,7 +61,7 @@ public class Vocabulary implements Serializable { } public VocabularyTerm getTermBySynonym(final String syn) { - return getTerm(synonyms.get(syn)); + return getTerm(synonyms.get(syn.toLowerCase())); } public Qualifier getTermAsQualifier(final String termId) { diff --git a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/VocabularyGroup.java b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/VocabularyGroup.java index 447228bf9..d9ff62596 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/VocabularyGroup.java +++ b/dhp-workflows/dhp-graph-mapper/src/main/java/eu/dnetlib/dhp/oa/graph/raw/common/VocabularyGroup.java @@ -3,7 +3,6 @@ package eu.dnetlib.dhp.oa.graph.raw.common; import java.io.Serializable; import java.util.*; -import java.util.function.Supplier; import java.util.stream.Collectors; import org.apache.commons.lang3.StringUtils; @@ -14,7 +13,7 @@ import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService; public class VocabularyGroup implements Serializable { - public static final String VOCABULARIES_XQUERY = "for $x in collection(' /db/DRIVER/VocabularyDSResources/VocabularyDSResourceType') \n" + public static final String VOCABULARIES_XQUERY = "for $x in collection('/db/DRIVER/VocabularyDSResources/VocabularyDSResourceType') \n" + "let $vocid := $x//VOCABULARY_NAME/@code\n" + "let $vocname := $x//VOCABULARY_NAME/text()\n" + @@ -46,7 +45,7 @@ public class VocabularyGroup implements Serializable { } vocs.addTerm(vocId, termId, termName); - vocs.addSynonyms(vocId, termId, termId); + // vocs.addSynonyms(vocId, termId, termId); } } @@ -58,7 +57,7 @@ public class VocabularyGroup implements Serializable { final String syn = arr[2].trim(); vocs.addSynonyms(vocId, termId, syn); - vocs.addSynonyms(vocId, termId, termId); + // vocs.addSynonyms(vocId, termId, termId); } } @@ -135,7 +134,7 @@ public class VocabularyGroup implements Serializable { Optional .ofNullable(vocs.get(id)) .orElseThrow(() -> new IllegalArgumentException("missing vocabulary id: " + vocId)) - .addSynonym(syn, termId); + .addSynonym(syn.toLowerCase(), termId); } } diff --git a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/clean/CleaningFunctionTest.java b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/clean/CleaningFunctionTest.java index d1f152342..1b21ce2d3 100644 --- a/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/clean/CleaningFunctionTest.java +++ b/dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/clean/CleaningFunctionTest.java @@ -60,8 +60,8 @@ public class CleaningFunctionTest { assertNotNull(p_out); - assertEquals("eng", p_out.getLanguage().getClassid()); - assertEquals("English", p_out.getLanguage().getClassname()); + assertEquals("und", p_out.getLanguage().getClassid()); + assertEquals("Undetermined", p_out.getLanguage().getClassname()); assertEquals("0018", p_out.getInstance().get(0).getInstancetype().getClassid()); assertEquals("Annotation", p_out.getInstance().get(0).getInstancetype().getClassname()); diff --git a/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/result.json b/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/result.json index 89ebe5af5..b63a12f61 100644 --- a/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/result.json +++ b/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/result.json @@ -281,8 +281,8 @@ "value": "VIRTA" }, "instancetype": { - "classid": "Comentario", - "classname": "Comentario", + "classid": "Comment/debate", + "classname": "Comment/debate", "schemeid": "dnet:publication_resource", "schemename": "dnet:publication_resource" }, @@ -317,8 +317,8 @@ "vol": "" }, "language": { - "classid": "en", - "classname": "en", + "classid": "UNKNOWN", + "classname": "UNKNOWN", "schemeid": "dnet:languages", "schemename": "dnet:languages" }, diff --git a/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/synonyms.txt b/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/synonyms.txt index 10eba3e86..05484c8e5 100644 --- a/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/synonyms.txt +++ b/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/synonyms.txt @@ -1,223 +1,9 @@ -dnet:countries @=@ AF @=@ AFG -dnet:countries @=@ AF @=@ Afghanistan -dnet:countries @=@ AD @=@ Andorra -dnet:countries @=@ AO @=@ Angola -dnet:countries @=@ AR @=@ ARG -dnet:countries @=@ AR @=@ Argentina -dnet:countries @=@ AU @=@ AUS -dnet:countries @=@ AU @=@ Australia -dnet:countries @=@ AT @=@ AUT -dnet:countries @=@ AT @=@ Austria -dnet:countries @=@ AZ @=@ AZE -dnet:countries @=@ BD @=@ Bangladesh -dnet:countries @=@ BY @=@ Belarus -dnet:countries @=@ BE @=@ BEL -dnet:countries @=@ BE @=@ Belgium -dnet:countries @=@ BJ @=@ BEN -dnet:countries @=@ BO @=@ Bolivia, Plurinational State of -dnet:countries @=@ BA @=@ BIH -dnet:countries @=@ BA @=@ Bosnia-Hercegovina -dnet:countries @=@ BR @=@ BRA -dnet:countries @=@ BR @=@ Brazil -dnet:countries @=@ BG @=@ Bulgaria -dnet:countries @=@ BF @=@ BFA -dnet:countries @=@ KH @=@ Campuchea -dnet:countries @=@ CM @=@ CMR -dnet:countries @=@ CA @=@ CAN -dnet:countries @=@ CA @=@ Canada -dnet:countries @=@ CV @=@ Cape Verde -dnet:countries @=@ CL @=@ CHL -dnet:countries @=@ CL @=@ Chile -dnet:countries @=@ CN @=@ CHN -dnet:countries @=@ CN @=@ China -dnet:countries @=@ CO @=@ COL -dnet:countries @=@ CO @=@ Colombia -dnet:countries @=@ CG @=@ Congo, Republic -dnet:countries @=@ CD @=@ Congo, the Democratic Republic of the -dnet:countries @=@ CD @=@ Congo Democratic Republic (formerly Zaire) -dnet:countries @=@ CD @=@ Congo Democratic Republic -dnet:countries @=@ CD @=@ Zaire -dnet:countries @=@ CR @=@ CRI -dnet:countries @=@ CI @=@ CIV -dnet:countries @=@ CI @=@ Ivory Coast -dnet:countries @=@ HR @=@ Croatia -dnet:countries @=@ HR @=@ HRV -dnet:countries @=@ CY @=@ CYP -dnet:countries @=@ CY @=@ Cyprus -dnet:countries @=@ CZ @=@ CZE -dnet:countries @=@ CZ @=@ Czech Republic -dnet:countries @=@ CZ @=@ Czechoslovakia -dnet:countries @=@ DK @=@ DNK -dnet:countries @=@ DK @=@ Denmark -dnet:countries @=@ EC @=@ Ecuador -dnet:countries @=@ EG @=@ EGY -dnet:countries @=@ EG @=@ Egypt -dnet:countries @=@ SV @=@ SLV -dnet:countries @=@ EE @=@ EST -dnet:countries @=@ EE @=@ Estonia -dnet:countries @=@ ET @=@ ETH -dnet:countries @=@ EU @=@ EEC -dnet:countries @=@ FI @=@ FIN -dnet:countries @=@ FI @=@ Finland -dnet:countries @=@ MK @=@ Macedonia, the Former Yugoslav Republic Of -dnet:countries @=@ MK @=@ Macedonia -dnet:countries @=@ FR @=@ FRA -dnet:countries @=@ FR @=@ France -dnet:countries @=@ PF @=@ French Polynesia -dnet:countries @=@ PF @=@ PYF -dnet:countries @=@ TF @=@ French Southern Territories -dnet:countries @=@ GE @=@ Georgia -dnet:countries @=@ DE @=@ DEU -dnet:countries @=@ DE @=@ Germany -dnet:countries @=@ DE @=@ Germany, Berlin -dnet:countries @=@ GH @=@ GHA -dnet:countries @=@ GR @=@ EL -dnet:countries @=@ GR @=@ GRC -dnet:countries @=@ GL @=@ GRL -dnet:countries @=@ GN @=@ Guinea -dnet:countries @=@ GW @=@ Guinea-Bissau -dnet:countries @=@ VA @=@ Vatican State -dnet:countries @=@ HK @=@ HKG -dnet:countries @=@ HK @=@ Hong Kong -dnet:countries @=@ HK @=@ Hongkong -dnet:countries @=@ HU @=@ HUN -dnet:countries @=@ HU @=@ Hungary -dnet:countries @=@ IS @=@ ISL -dnet:countries @=@ IN @=@ IND -dnet:countries @=@ IN @=@ India -dnet:countries @=@ ID @=@ IDN -dnet:countries @=@ ID @=@ Indonesia -dnet:countries @=@ IR @=@ Iran -dnet:countries @=@ IR @=@ Iran, Islamic Republic of -dnet:countries @=@ IE @=@ IRL -dnet:countries @=@ IE @=@ Ireland -dnet:countries @=@ IL @=@ ISR -dnet:countries @=@ IL @=@ Israel -dnet:countries @=@ IT @=@ ITA -dnet:countries @=@ IT @=@ Italy -dnet:countries @=@ JM @=@ Jamaica -dnet:countries @=@ JP @=@ JPN -dnet:countries @=@ JP @=@ Japan -dnet:countries @=@ KZ @=@ KAZ -dnet:countries @=@ KZ @=@ Kazakistan -dnet:countries @=@ KZ @=@ Kazakstan -dnet:countries @=@ KE @=@ KEN -dnet:countries @=@ KE @=@ Kenya -dnet:countries @=@ KR @=@ KOR -dnet:countries @=@ KR @=@ Korea, Republic of -dnet:countries @=@ KR @=@ Korean Republic (South Korea) -dnet:countries @=@ KP @=@ PRK -dnet:countries @=@ LY @=@ Libya -dnet:countries @=@ LT @=@ LTU -dnet:countries @=@ LU @=@ LUX -dnet:countries @=@ LU @=@ Luxembourg -dnet:countries @=@ MO @=@ Macao -dnet:countries @=@ MG @=@ Madagascar -dnet:countries @=@ MY @=@ Malaysia -dnet:countries @=@ ML @=@ Mali -dnet:countries @=@ MT @=@ Malta -dnet:countries @=@ MU @=@ Mauritius -dnet:countries @=@ MX @=@ MEX -dnet:countries @=@ MX @=@ Mexico -dnet:countries @=@ FM @=@ Micronesia -dnet:countries @=@ MD @=@ Moldova -dnet:countries @=@ MD @=@ Moldova, Republic of -dnet:countries @=@ MN @=@ Mongolia -dnet:countries @=@ MA 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@=@ Editorial de revista, no evaluado por pares dnet:review_levels @=@ 0002 @=@ Editorial de revista, não avaliado por pares @@ -1095,7 +1048,6 @@ dnet:review_levels @=@ 0002 @=@ communication_invitee dnet:review_levels @=@ 0002 @=@ doc-type:preprint dnet:review_levels @=@ 0002 @=@ doc-type:workingPaper dnet:review_levels @=@ 0002 @=@ draf -dnet:review_levels @=@ 0002 @=@ draft dnet:review_levels @=@ 0002 @=@ eu-repo/semantics/submittedVersion dnet:review_levels @=@ 0002 @=@ http://purl.org/coar/resource_type/c_8042 dnet:review_levels @=@ 0002 @=@ http://purl.org/coar/resource_type/c_816b @@ -1178,6 +1130,7 @@ dnet:review_levels @=@ 0001 @=@ Artículo de investigación, Investigaciones ori dnet:review_levels @=@ 0001 @=@ Artículo evaluado por pares dnet:review_levels @=@ 0001 @=@ Artículo evaluado por pares, Ensayos de investigación dnet:review_levels @=@ 0001 @=@ Artículo evaluado por pares, Investigaciones empíricas, Artículos de investigación +dnet:review_levels @=@ 0001 @=@ Artículo revisado dnet:review_levels @=@ 0001 @=@ Artículo revisado por pares dnet:review_levels @=@ 0001 @=@ Artículos de estudiantes, Artículo evaluado por pares, Artículos de investigación dnet:review_levels @=@ 0001 @=@ Artículos de investigación evaluados por doble ciego @@ -1185,7 +1138,7 @@ dnet:review_levels @=@ 0001 @=@ Artículos evaluadores por doble ciego dnet:review_levels @=@ 0001 @=@ Artículos evaluados por pares dnet:review_levels @=@ 0001 @=@ Artículos evaluados por pares académicos dnet:review_levels @=@ 0001 @=@ Artículos revisados por pares -dnet:review_levels @=@ 0001 @=@ avaliadas pelos pares +dnet:review_levels @=@ 0001 @=@ Avaliadas pelos pares dnet:review_levels @=@ 0001 @=@ Avaliado anonimamente por pares dnet:review_levels @=@ 0001 @=@ Avaliado em duplo cego por pares dnet:review_levels @=@ 0001 @=@ Avaliado pela Editoria @@ -1236,6 +1189,7 @@ dnet:review_levels @=@ 0001 @=@ Peer-reviewed Review dnet:review_levels @=@ 0001 @=@ Peer-reviewed Review Article dnet:review_levels @=@ 0001 @=@ Peer-reviewed Text dnet:review_levels @=@ 0001 @=@ Peer-reviewed communication +dnet:review_levels @=@ 0001 @=@ Peer-reviewed conference proceedings dnet:review_levels @=@ 0001 @=@ Peer-reviewed research article dnet:review_levels @=@ 0001 @=@ Peer-reviewed short communication dnet:review_levels @=@ 0001 @=@ PeerReviewed diff --git a/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/terms.txt b/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/terms.txt index 1daca3ca9..59bed7c3a 100644 --- a/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/terms.txt +++ b/dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/terms.txt @@ -1,414 +1,39 @@ ModularUiLabels @=@ ModularUiLabels @=@ PendingRepositoryResources @=@ Pending datasource ModularUiLabels @=@ ModularUiLabels @=@ RepositoryServiceResources @=@ Valid datasource -dnet:topic_types @=@ 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+dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:crosswalk:infospace @=@ Harvested +dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:crosswalk @=@ Harvested +dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:crosswalk:aggregator @=@ Harvested +dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:crosswalk:datasetarchive @=@ Harvested +dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:actionset @=@ Harvested +dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:crosswalk:entityregistry @=@ Harvested +dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:crosswalk:repository @=@ Harvested +dnet:provenanceActions @=@ dnet:provenanceActions @=@ sysimport:mining:aggregator @=@ Inferred by OpenAIRE +dnet:provenanceActions @=@ dnet:provenanceActions @=@ community:subject @=@ Inferred by OpenAIRE +dnet:provenanceActions @=@ dnet:provenanceActions @=@ community:zenodocommunity @=@ Inferred by OpenAIRE 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sysimport:mining:datasetarchive @=@ Inferred by OpenAIRE +dnet:provenanceActions @=@ dnet:provenanceActions @=@ community:semrel @=@ Inferred by OpenAIRE +dnet:provenanceActions @=@ dnet:provenanceActions @=@ user:claim @=@ Linked by user +dnet:provenanceActions @=@ dnet:provenanceActions @=@ user:claim:pid @=@ Linked by user +dnet:provenanceActions @=@ dnet:provenanceActions @=@ user:insert @=@ Linked by user +dnet:provenanceActions @=@ dnet:provenanceActions @=@ user:claim:search @=@ Linked by user +dnet:provenanceActions @=@ dnet:provenanceActions @=@ UNKNOWN @=@ UNKNOWN +dnet:provenanceActions @=@ dnet:provenanceActions @=@ country:instrepos @=@ Inferred by OpenAIRE dnet:access_modes @=@ dnet:access_modes @=@ 12MONTHS @=@ 12 Months Embargo dnet:access_modes @=@ dnet:access_modes @=@ 6MONTHS @=@ 6 Months Embargo dnet:access_modes @=@ dnet:access_modes @=@ CLOSED @=@ Closed Access @@ -418,10 +43,140 @@ dnet:access_modes @=@ dnet:access_modes @=@ OPEN SOURCE @=@ Open Source dnet:access_modes @=@ dnet:access_modes @=@ OTHER @=@ Other dnet:access_modes @=@ dnet:access_modes @=@ RESTRICTED @=@ Restricted dnet:access_modes @=@ dnet:access_modes @=@ UNKNOWN @=@ not available -dnet:result_typologies @=@ dnet:result_typologies @=@ dataset @=@ dataset -dnet:result_typologies @=@ dnet:result_typologies @=@ other @=@ other -dnet:result_typologies @=@ dnet:result_typologies @=@ publication @=@ publication -dnet:result_typologies @=@ dnet:result_typologies @=@ software @=@ software +fct:funding_typologies @=@ fct:funding_typologies @=@ fct:program @=@ fct:program +dnet:compatibilityLevel @=@ dnet:compatibilityLevel @=@ openaire2.0 @=@ OpenAIRE 2.0 (EC funding) +dnet:compatibilityLevel @=@ dnet:compatibilityLevel @=@ openaire3.0 @=@ OpenAIRE 3.0 (OA, funding) +dnet:compatibilityLevel @=@ dnet:compatibilityLevel @=@ driver @=@ OpenAIRE Basic (DRIVER OA) +dnet:compatibilityLevel @=@ dnet:compatibilityLevel @=@ openaire-cris_1.1 @=@ OpenAIRE CRIS v1.1 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database +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ infospace @=@ Information Space +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ pubsrepository::institutional @=@ Institutional Repository +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ aggregator::pubsrepository::institutional @=@ Institutional Repository Aggregator +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ pubsrepository::journal @=@ Journal +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ aggregator::pubsrepository::journals @=@ Journal Aggregator/Publisher +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ pubsrepository::mock @=@ Other +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ pubscatalogue::unknown @=@ Publication Catalogue +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ pubsrepository::unknown @=@ Publication Repository +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ aggregator::pubsrepository::unknown @=@ Publication Repository Aggregator +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ entityregistry @=@ Registry +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ entityregistry::repositories @=@ Registry of repositories +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ entityregistry::products @=@ Registry of research products +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ entityregistry::researchers @=@ Registry of researchers +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ entityregistry::organizations @=@ Registry of organizations +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ scholarcomminfra @=@ Scholarly Comm. Infrastructure +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ softwarerepository @=@ Software Repository +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ pubsrepository::thematic @=@ Thematic Repository +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ websource @=@ Web Source +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ aggregator::softwarerepository @=@ Software Repository Aggregator +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ orprepository @=@ Repository +dnet:datasource_typologies @=@ dnet:datasource_typologies @=@ researchgraph @=@ Research Graph +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ ACM @=@ ACM Computing Classification System +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ agrovoc @=@ AGROVOC +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ bicssc @=@ BIC standard subject categories +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ DFG @=@ DFG Classification +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ ddc @=@ Dewey Decimal Classification +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ nsf:fieldOfApplication @=@ Field of Application (NSF) +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ gok @=@ Göttingen Online Classification +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ ec:h2020topics @=@ Horizon 2020 Topics +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ IPC @=@ International Patent Classification +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ jel @=@ JEL Classification +dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ lcsh @=@ Library of 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+ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ BSG @=@ Research for the benefit of specific groups +ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ CIP-EIP-TN @=@ CIP-Eco-Innovation - CIP-Thematic Network +ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ CP @=@ Collaborative project +ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ CP-CSA @=@ Combination of CP & CSA +ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ CSA @=@ Coordination and support action +ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ ERC @=@ Support for frontier research (ERC) +ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ MC @=@ Support for training and career development of researchers (Marie Curie) +ec:FP7contractTypes @=@ ec:FP7contractTypes @=@ NoE @=@ Network of Excellence +wt:funding_relations @=@ wt:funding_relations @=@ wt:hasParentFunding @=@ wt:hasParentFunding dnet:languages @=@ dnet:languages @=@ abk @=@ Abkhazian dnet:languages @=@ dnet:languages @=@ ace @=@ Achinese dnet:languages @=@ dnet:languages @=@ ach @=@ Acoli @@ -837,62 +592,389 @@ dnet:languages @=@ dnet:languages @=@ zha @=@ Zhuang; Chuang dnet:languages @=@ dnet:languages @=@ zul @=@ Zulu dnet:languages @=@ dnet:languages @=@ zun @=@ Zuni dnet:languages @=@ dnet:languages @=@ sga @=@ old Irish -dnet:pid_types @=@ dnet:pid_types @=@ GeoPass @=@ Geographic Location-Password Scheme -dnet:pid_types @=@ dnet:pid_types @=@ GBIF @=@ Global Biodiversity Information Facility -dnet:pid_types @=@ dnet:pid_types @=@ ISNI @=@ International Standard Name Identifier -dnet:pid_types @=@ dnet:pid_types @=@ oai @=@ Open Archives Initiative -dnet:pid_types @=@ dnet:pid_types @=@ orcid @=@ Open Researcher and Contributor ID -dnet:pid_types @=@ dnet:pid_types @=@ PANGAEA @=@ PANGAEA -dnet:pid_types @=@ dnet:pid_types @=@ UNKNOWN @=@ UNKNOWN -dnet:pid_types @=@ dnet:pid_types @=@ VIAF @=@ Virtual International Authority File -dnet:pid_types @=@ dnet:pid_types @=@ arXiv @=@ arXiv -dnet:pid_types @=@ dnet:pid_types @=@ doi @=@ doi -dnet:pid_types @=@ dnet:pid_types @=@ info:eu-repo/dai @=@ info:eu-repo/dai -dnet:pid_types @=@ dnet:pid_types @=@ orcidworkid @=@ orcid workid -dnet:pid_types @=@ dnet:pid_types @=@ pmc @=@ pmc -dnet:pid_types @=@ dnet:pid_types @=@ pmid @=@ pmid -dnet:pid_types @=@ dnet:pid_types @=@ urn @=@ urn -dnet:content_description_typologies @=@ D-Net Content Description Typologies @=@ file::EuropePMC @=@ file::EuropePMC -dnet:content_description_typologies @=@ D-Net Content Description Typologies @=@ file::PDF @=@ file::PDF -dnet:content_description_typologies @=@ D-Net Content Description Typologies @=@ file::WoS @=@ file::WoS -dnet:content_description_typologies @=@ D-Net Content Description Typologies @=@ metadata @=@ metadata -dnet:content_description_typologies @=@ D-Net Content Description Typologies @=@ file::hybrid @=@ file::hybrid -fct:funding_typologies @=@ fct:funding_typologies @=@ fct:program @=@ fct:program -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ ACM @=@ ACM Computing Classification System -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ agrovoc @=@ AGROVOC -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ bicssc @=@ BIC standard subject categories -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ DFG @=@ DFG Classification -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ ddc @=@ Dewey Decimal Classification -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ nsf:fieldOfApplication @=@ Field of Application (NSF) -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ gok @=@ Göttingen Online Classification -dnet:subject_classification_typologies @=@ dnet:subject_classification_typologies @=@ ec:h2020topics @=@ Horizon 2020 Topics -dnet:subject_classification_typologies @=@ 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+dnet:pid_types @=@ dnet:pid_types @=@ epo_id @=@ European Patent Office application ID +dnet:pid_types @=@ dnet:pid_types @=@ gsk @=@ GSK Identifier +dnet:pid_types @=@ dnet:pid_types @=@ GeoPass @=@ Geographic Location-Password Scheme +dnet:pid_types @=@ dnet:pid_types @=@ GBIF @=@ Global Biodiversity Information Facility +dnet:pid_types @=@ dnet:pid_types @=@ isrctn @=@ ISRCTN Identifier +dnet:pid_types @=@ dnet:pid_types @=@ ISNI @=@ International Standard Name Identifier +dnet:pid_types @=@ dnet:pid_types @=@ jprn @=@ JPRN Identifier +dnet:pid_types @=@ dnet:pid_types @=@ mag_id @=@ Microsoft Academic Graph Identifier +dnet:pid_types @=@ dnet:pid_types @=@ oai @=@ Open Archives Initiative +dnet:pid_types @=@ dnet:pid_types @=@ orcid @=@ Open Researcher and Contributor ID +dnet:pid_types @=@ dnet:pid_types @=@ PANGAEA @=@ PANGAEA +dnet:pid_types @=@ dnet:pid_types @=@ epo_nr_epodoc @=@ Patent application number in EPODOC format +dnet:pid_types @=@ dnet:pid_types @=@ UNKNOWN @=@ UNKNOWN +dnet:pid_types @=@ dnet:pid_types @=@ VIAF @=@ Virtual International Authority File +dnet:pid_types @=@ dnet:pid_types @=@ arXiv @=@ arXiv +dnet:pid_types @=@ dnet:pid_types @=@ doi @=@ doi +dnet:pid_types @=@ dnet:pid_types @=@ grid @=@ grid +dnet:pid_types @=@ dnet:pid_types @=@ info:eu-repo/dai @=@ info:eu-repo/dai +dnet:pid_types @=@ dnet:pid_types @=@ orcidworkid @=@ orcid workid +dnet:pid_types @=@ dnet:pid_types @=@ pmc @=@ pmc +dnet:pid_types @=@ dnet:pid_types @=@ pmid @=@ pmid +dnet:pid_types @=@ dnet:pid_types @=@ urn @=@ urn +dnet:pid_types @=@ dnet:pid_types @=@ who @=@ WHO Identifier +dnet:pid_types @=@ dnet:pid_types @=@ drks @=@ DRKS Identifier +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/ACM @=@ An ACM classification term that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/ARXIV @=@ An ARXIV classification term that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/DDC @=@ A Dewey Decimal classification term (DDC) that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/JEL @=@ A Journal of Economic Literature (JEL) classification term that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/OPENACCESS_VERSION @=@ An Open Access versions of your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/DATASET/IS_REFERENCED_BY @=@ A dataset referenced by your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/DATASET/REFERENCES @=@ A dataset that refers to your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/DATASET/IS_RELATED_TO @=@ A dataset related to your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/DATASET/IS_SUPPLEMENTED_TO @=@ A dataset that supplements your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PUBLICATION/IS_RELATED_TO @=@ A publication related to your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PUBLICATION/REFERENCES @=@ A publication referenced by your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PUBLICATION/IS_REFERENCED_BY @=@ A publication that refers to your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PUBLICATION/IS_SUPPLEMENTED_BY @=@ A publication that is supplemented by your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PUBLICATION/IS_SUPPLEMENTED_TO @=@ A publication that supplements your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SOFTWARE @=@ A software referred by your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MORE/OPENACCESS_VERSION @=@ Another Open Access version of a publication +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MORE/PID @=@ Another persistent identifier associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/MESHEUROPMC @=@ A classification term from the Medical Subject Headings (MeSH) that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/ABSTRACT @=@ An abstract describing among your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PUBLICATION_DATE @=@ A date of publication missing in your content +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PID @=@ A persistent identifier associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MORE/SUBJECT/ACM @=@ Another ACM classification term that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MORE/SUBJECT/ARXIV @=@ Another ARXIV classification term that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MORE/SUBJECT/DDC @=@ Another Dewey Decimal classification term (DDC) that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MORE/SUBJECT/JEL @=@ Another Journal of Economic Literature (JEL) classification term that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MORE/SUBJECT/MESHEUROPMC @=@ Another classification term from the Medical Subject Headings (MeSH) that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/PROJECT @=@ A project reference that can be associated to your publications +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/DATASET/IS_SUPPLEMENTED_BY @=@ A dataset that is supplemented by your records +dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/AUTHOR/ORCID @=@ An Open Researcher and Contributor ID (ORCID) that can be associated to an author of your publications +dnet:review_levels @=@ dnet:review_levels @=@ 0000 @=@ Unknown dnet:review_levels @=@ dnet:review_levels @=@ 0002 @=@ nonPeerReviewed dnet:review_levels @=@ dnet:review_levels @=@ 0001 @=@ peerReviewed \ No newline at end of file From 4ec262db5318661bcfba6cb9497cfcca3370bbbc Mon Sep 17 00:00:00 2001 From: Claudio Atzori Date: Tue, 16 Jun 2020 15:28:20 +0200 Subject: [PATCH 5/5] included externalreference(s) in the result view on the Hive graph DB --- .../graph/hive/oozie_app/lib/scripts/postprocessing.sql | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql index 6c49679cd..7bec2fe04 100644 --- a/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql +++ b/dhp-workflows/dhp-graph-mapper/src/main/resources/eu/dnetlib/dhp/oa/graph/hive/oozie_app/lib/scripts/postprocessing.sql @@ -1,10 +1,10 @@ DROP VIEW IF EXISTS ${hiveDbName}.result; CREATE VIEW IF NOT EXISTS result as - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.publication p + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, externalreference, instance from ${hiveDbName}.publication p union all - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.dataset d + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, externalreference, instance from ${hiveDbName}.dataset d union all - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.software s + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, externalreference, instance from ${hiveDbName}.software s union all - select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, instance from ${hiveDbName}.otherresearchproduct o; + select id, dateofcollection, title, publisher, bestaccessright, datainfo, collectedfrom, pid, author, resulttype, language, country, subject, description, dateofacceptance, embargoenddate, resourcetype, context, externalreference, instance from ${hiveDbName}.otherresearchproduct o;