diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step18.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/computeProductionStats.sql similarity index 100% rename from dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step18.sql rename to dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/computeProductionStats.sql diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step1.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step1.sql deleted file mode 100644 index 9697a1dc8..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step1.sql +++ /dev/null @@ -1,8 +0,0 @@ --------------------------------------------------------------- --------------------------------------------------------------- --- Stats database creation --------------------------------------------------------------- --------------------------------------------------------------- - -DROP database IF EXISTS ${stats_db_name} CASCADE; -CREATE database ${stats_db_name}; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step10.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step10.sql deleted file mode 100644 index 46ff295f4..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step10.sql +++ /dev/null @@ -1,21 +0,0 @@ ------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------- --- Tables/views from external tables/views (Fundref, Country, CountyGDP, roarmap, rndexpediture) ------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------- -CREATE OR REPLACE VIEW ${stats_db_name}.fundref AS SELECT * FROM ${external_stats_db_name}.fundref; -CREATE OR REPLACE VIEW ${stats_db_name}.country AS SELECT * FROM ${external_stats_db_name}.country; -CREATE OR REPLACE VIEW ${stats_db_name}.countrygdp AS SELECT * FROM ${external_stats_db_name}.countrygdp; -CREATE OR REPLACE VIEW ${stats_db_name}.roarmap AS SELECT * FROM ${external_stats_db_name}.roarmap; -CREATE OR REPLACE VIEW ${stats_db_name}.rndexpediture AS SELECT * FROM ${external_stats_db_name}.rndexpediture; -CREATE OR REPLACE VIEW ${stats_db_name}.context AS SELECT * FROM ${external_stats_db_name}.context; -CREATE OR REPLACE VIEW ${stats_db_name}.category AS SELECT * FROM ${external_stats_db_name}.category; -CREATE OR REPLACE VIEW ${stats_db_name}.concept AS SELECT * FROM ${external_stats_db_name}.concept; - - ------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------- --- Creation date of the database ------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------- -create table ${stats_db_name}.creation_date as select date_format(current_date(), 'dd-MM-yyyy') as date; \ No newline at end of file diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step11.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step11.sql deleted file mode 100644 index 13e141459..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step11.sql +++ /dev/null @@ -1,44 +0,0 @@ ----------------------------------------------------------------- ----------------------------------------------------------------- --- Post processing - Updates on main tables ----------------------------------------------------------------- ----------------------------------------------------------------- - ---Datasource temporary table updates -UPDATE ${stats_db_name}.datasource_tmp SET harvested='true' WHERE datasource_tmp.id IN (SELECT DISTINCT d.id FROM ${stats_db_name}.datasource_tmp d, ${stats_db_name}.result_datasources rd WHERE d.id=rd.datasource); - --- Project temporary table update and final project table creation with final updates that can not be applied to ORC tables -UPDATE ${stats_db_name}.project_tmp SET haspubs='yes' WHERE project_tmp.id IN (SELECT pr.id FROM ${stats_db_name}.project_results pr, ${stats_db_name}.result r WHERE pr.result=r.id AND r.type='publication'); - -DROP TABLE IF EXISTS ${stats_db_name}.project; -CREATE TABLE ${stats_db_name}.project stored as parquet as -SELECT p.id , p.acronym, p.title, p.funder, p.funding_lvl0, p.funding_lvl1, p.funding_lvl2, p.ec39, p.type, p.startdate, p.enddate, p.start_year, p.end_year, p.duration, -CASE WHEN prr1.id IS NULL THEN 'no' ELSE 'yes' END AS haspubs, -CASE WHEN prr1.id IS NULL THEN 0 ELSE prr1.np END AS numpubs, -CASE WHEN prr2.id IS NULL THEN 0 ELSE prr2.daysForlastPub END AS daysforlastpub, -CASE WHEN prr2.id IS NULL THEN 0 ELSE prr2.dp END AS delayedpubs, -p.callidentifier, p.code -FROM ${stats_db_name}.project_tmp p -LEFT JOIN (SELECT pr.id, count(distinct pr.result) AS np - FROM ${stats_db_name}.project_results pr INNER JOIN ${stats_db_name}.result r ON pr.result=r.id - WHERE r.type='publication' - GROUP BY pr.id) AS prr1 on prr1.id = p.id -LEFT JOIN (SELECT pp.id, max(datediff(to_date(r.date), to_date(pp.enddate)) ) AS daysForlastPub , count(distinct r.id) AS dp - FROM ${stats_db_name}.project_tmp pp, ${stats_db_name}.project_results pr, ${stats_db_name}.result r - WHERE pp.id=pr.id AND pr.result=r.id AND r.type='publication' AND datediff(to_date(r.date), to_date(pp.enddate)) > 0 - GROUP BY pp.id) AS prr2 - ON prr2.id = p.id; - --- Publication temporary table updates -UPDATE ${stats_db_name}.publication_tmp SET delayed = 'yes' WHERE publication_tmp.id IN (SELECT distinct r.id FROM stats_wf_db_obs.result r, ${stats_db_name}.project_results pr, ${stats_db_name}.project_tmp p WHERE r.id=pr.result AND pr.id=p.id AND to_date(r.date)-to_date(p.enddate) > 0); - --- Dataset temporary table updates -UPDATE ${stats_db_name}.dataset_tmp SET delayed = 'yes' WHERE dataset_tmp.id IN (SELECT distinct r.id FROM stats_wf_db_obs.result r, ${stats_db_name}.project_results pr, ${stats_db_name}.project_tmp p WHERE r.id=pr.result AND pr.id=p.id AND to_date(r.date)-to_date(p.enddate) > 0); - --- Software temporary table updates -UPDATE ${stats_db_name}.software_tmp SET delayed = 'yes' WHERE software_tmp.id IN (SELECT distinct r.id FROM ${stats_db_name}.result r, ${stats_db_name}.project_results pr, ${stats_db_name}.project_tmp p WHERE r.id=pr.result AND pr.id=p.id AND to_date(r.date)-to_date(p.enddate) > 0); - --- Oherresearchproduct temporary table updates -UPDATE ${stats_db_name}.otherresearchproduct_tmp SET delayed = 'yes' WHERE otherresearchproduct_tmp.id IN (SELECT distinct r.id FROM ${stats_db_name}.result r, ${stats_db_name}.project_results pr, ${stats_db_name}.project_tmp p WHERE r.id=pr.result AND pr.id=p.id AND to_date(r.date)-to_date(p.enddate) > 0); - -CREATE OR REPLACE VIEW ${stats_db_name}.project_results_publication AS SELECT result_projects.id AS result, result_projects.project AS project_results, result.date as resultdate, project.enddate as projectenddate, result_projects.daysfromend AS daysfromend FROM ${stats_db_name}.result_projects, ${stats_db_name}.result, ${stats_db_name}.project WHERE result_projects.id=result.id AND result.type='publication' AND project.id=result_projects.project; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step12.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step12.sql deleted file mode 100644 index 25439852e..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step12.sql +++ /dev/null @@ -1,38 +0,0 @@ ------------------------------------------------------------------------------------------------------- --- Creating parquet tables from the updated temporary tables and removing unnecessary temporary tables ------------------------------------------------------------------------------------------------------- - -DROP TABLE IF EXISTS ${stats_db_name}.datasource; -CREATE TABLE ${stats_db_name}.datasource stored AS parquet AS SELECT * FROM ${stats_db_name}.datasource_tmp; - -DROP TABLE IF EXISTS ${stats_db_name}.publication; -CREATE TABLE ${stats_db_name}.publication stored AS parquet AS SELECT * FROM ${stats_db_name}.publication_tmp; - -DROP TABLE IF EXISTS ${stats_db_name}.dataset; -CREATE TABLE ${stats_db_name}.dataset stored AS parquet AS SELECT * FROM ${stats_db_name}.dataset_tmp; - -DROP TABLE IF EXISTS ${stats_db_name}.software; -CREATE TABLE ${stats_db_name}.software stored AS parquet AS SELECT * FROM ${stats_db_name}.software_tmp; - -DROP TABLE IF EXISTS ${stats_db_name}.otherresearchproduct; -CREATE TABLE ${stats_db_name}.otherresearchproduct stored AS parquet AS SELECT * FROM ${stats_db_name}.otherresearchproduct_tmp; - -DROP TABLE ${stats_db_name}.project_tmp; -DROP TABLE ${stats_db_name}.datasource_tmp; -DROP TABLE ${stats_db_name}.publication_tmp; -DROP TABLE ${stats_db_name}.dataset_tmp; -DROP TABLE ${stats_db_name}.software_tmp; -DROP TABLE ${stats_db_name}.otherresearchproduct_tmp; - ----------------------------------------------- --- Re-creating views from final parquet tables ---------------------------------------------- - --- Result -CREATE OR REPLACE VIEW ${stats_db_name}.result AS SELECT *, bestlicence AS access_mode FROM ${stats_db_name}.publication UNION ALL SELECT *, bestlicence as access_mode FROM ${stats_db_name}.software UNION ALL SELECT *, bestlicence AS access_mode FROM ${stats_db_name}.dataset UNION ALL SELECT *, bestlicence AS access_mode FROM ${stats_db_name}.otherresearchproduct; - - -------------------------------------------------------------------------------- --- To see with Antonis if the following is needed and where it should be placed -------------------------------------------------------------------------------- -CREATE TABLE ${stats_db_name}.numbers_country AS SELECT org.country AS country, count(distinct rd.datasource) AS datasources, count(distinct r.id) AS publications FROM ${stats_db_name}.result r, ${stats_db_name}.result_datasources rd, ${stats_db_name}.datasource d, ${stats_db_name}.datasource_organizations dor, ${stats_db_name}.organization org WHERE r.id=rd.id AND rd.datasource=d.id AND d.id=dor.id AND dor.organization=org.id AND r.type='publication' AND r.bestlicence='Open Access' GROUP BY org.country; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step13.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step13.sql deleted file mode 100644 index 795770313..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step13.sql +++ /dev/null @@ -1,59 +0,0 @@ ------------------------------------------------------- ------------------------------------------------------- --- Additional relations --- --- Sources related tables/views ------------------------------------------------------- ------------------------------------------------------- -CREATE TABLE IF NOT EXISTS ${stats_db_name}.publication_sources as -SELECT p.id, case when d.id is null then 'other' else p.datasource end as datasource -FROM ( - SELECT substr(p.id, 4) as id, substr(datasource, 4) as datasource -from ${openaire_db_name}.publication p lateral view explode(p.collectedfrom.key) c as datasource) p -LEFT OUTER JOIN -( - SELECT substr(d.id, 4) id - from ${openaire_db_name}.datasource d - WHERE d.datainfo.deletedbyinference=false) d on p.datasource = d.id; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.dataset_sources as -SELECT p.id, case when d.id is null then 'other' else p.datasource end as datasource -FROM ( - SELECT substr(p.id, 4) as id, substr(datasource, 4) as datasource -from ${openaire_db_name}.dataset p lateral view explode(p.collectedfrom.key) c as datasource) p -LEFT OUTER JOIN -( - SELECT substr(d.id, 4) id - from ${openaire_db_name}.datasource d - WHERE d.datainfo.deletedbyinference=false) d on p.datasource = d.id; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.software_sources as -SELECT p.id, case when d.id is null then 'other' else p.datasource end as datasource -FROM ( - SELECT substr(p.id, 4) as id, substr(datasource, 4) as datasource -from ${openaire_db_name}.software p lateral view explode(p.collectedfrom.key) c as datasource) p -LEFT OUTER JOIN -( - SELECT substr(d.id, 4) id - from ${openaire_db_name}.datasource d - WHERE d.datainfo.deletedbyinference=false) d on p.datasource = d.id; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.otherresearchproduct_sources as -SELECT p.id, case when d.id is null then 'other' else p.datasource end as datasource -FROM ( - SELECT substr(p.id, 4) as id, substr(datasource, 4) as datasource -from ${openaire_db_name}.otherresearchproduct p lateral view explode(p.collectedfrom.key) c as datasource) p -LEFT OUTER JOIN -( - SELECT substr(d.id, 4) id - from ${openaire_db_name}.datasource d - WHERE d.datainfo.deletedbyinference=false) d on p.datasource = d.id; - -CREATE VIEW IF NOT EXISTS ${stats_db_name}.result_sources AS -SELECT * FROM ${stats_db_name}.publication_sources -UNION ALL -SELECT * FROM ${stats_db_name}.dataset_sources -UNION ALL -SELECT * FROM ${stats_db_name}.software_sources -UNION ALL -SELECT * FROM ${stats_db_name}.otherresearchproduct_sources; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step14.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step14.sql deleted file mode 100644 index 4a56b5d68..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step14.sql +++ /dev/null @@ -1,49 +0,0 @@ ------------------------------------------------------- ------------------------------------------------------- --- Additional relations --- --- Licences related tables/views ------------------------------------------------------- ------------------------------------------------------- -CREATE TABLE IF NOT EXISTS ${stats_db_name}.publication_licenses AS -SELECT substr(p.id, 4) as id, licenses.value as type -from ${openaire_db_name}.publication p LATERAL VIEW explode(p.instance.license) instances as licenses -where licenses.value is not null and licenses.value != '' and p.datainfo.deletedbyinference=false; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.dataset_licenses AS -SELECT substr(p.id, 4) as id, licenses.value as type -from ${openaire_db_name}.dataset p LATERAL VIEW explode(p.instance.license) instances as licenses -where licenses.value is not null and licenses.value != '' and p.datainfo.deletedbyinference=false; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.software_licenses AS -SELECT substr(p.id, 4) as id, licenses.value as type -from ${openaire_db_name}.software p LATERAL VIEW explode(p.instance.license) instances as licenses -where licenses.value is not null and licenses.value != '' and p.datainfo.deletedbyinference=false; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.otherresearchproduct_licenses AS -SELECT substr(p.id, 4) as id, licenses.value as type -from ${openaire_db_name}.otherresearchproduct p LATERAL VIEW explode(p.instance.license) instances as licenses -where licenses.value is not null and licenses.value != '' and p.datainfo.deletedbyinference=false; - -CREATE VIEW IF NOT EXISTS ${stats_db_name}.result_licenses AS -SELECT * FROM ${stats_db_name}.publication_licenses -UNION ALL -SELECT * FROM ${stats_db_name}.dataset_licenses -UNION ALL -SELECT * FROM ${stats_db_name}.software_licenses -UNION ALL -SELECT * FROM ${stats_db_name}.otherresearchproduct_licenses; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.organization_pids AS -select substr(o.id, 4) as id, ppid.qualifier.classname as type, ppid.value as pid -from ${openaire_db_name}.organization o lateral view explode(o.pid) pids as ppid; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.organization_sources as -SELECT o.id, case when d.id is null then 'other' else o.datasource end as datasource -FROM ( - SELECT substr(o.id, 4) as id, substr(instances.instance.key, 4) as datasource - from ${openaire_db_name}.organization o lateral view explode(o.collectedfrom) instances as instance) o - LEFT OUTER JOIN ( - SELECT substr(d.id, 4) id - from ${openaire_db_name}.datasource d - WHERE d.datainfo.deletedbyinference=false) d on o.datasource = d.id; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step15.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step15.sql deleted file mode 100644 index 60b37048b..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step15.sql +++ /dev/null @@ -1,36 +0,0 @@ ------------------------------------------------------- ------------------------------------------------------- --- Additional relations --- --- Refereed related tables/views ------------------------------------------------------- ------------------------------------------------------- - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.publication_refereed as -select substr(r.id, 4) as id, inst.refereed.classname as refereed -from ${openaire_db_name}.publication r lateral view explode(r.instance) instances as inst -where r.datainfo.deletedbyinference=false; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.dataset_refereed as -select substr(r.id, 4) as id, inst.refereed.classname as refereed -from ${openaire_db_name}.dataset r lateral view explode(r.instance) instances as inst -where r.datainfo.deletedbyinference=false; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.software_refereed as -select substr(r.id, 4) as id, inst.refereed.classname as refereed -from ${openaire_db_name}.software r lateral view explode(r.instance) instances as inst -where r.datainfo.deletedbyinference=false; - -CREATE TABLE IF NOT EXISTS ${stats_db_name}.otherresearchproduct_refereed as -select substr(r.id, 4) as id, inst.refereed.classname as refereed -from ${openaire_db_name}.otherresearchproduct r lateral view explode(r.instance) instances as inst -where r.datainfo.deletedbyinference=false; - -CREATE VIEW IF NOT EXISTS ${stats_db_name}.result_refereed as -select * from ${stats_db_name}.publication_refereed -union all -select * from ${stats_db_name}.dataset_refereed -union all -select * from ${stats_db_name}.software_refereed -union all -select * from ${stats_db_name}.otherresearchproduct_refereed; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16.sql deleted file mode 100644 index 33849b960..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16.sql +++ /dev/null @@ -1,80 +0,0 @@ ----------------------------------------------------- --- Shortcuts for various definitions in stats db --- ----------------------------------------------------- - --- Peer reviewed: --- Results that have been collected from Crossref -create table ${stats_db_name}.result_peerreviewed as -with peer_reviewed as ( - select distinct r.id as id - from ${stats_db_name}.result r - join ${stats_db_name}.result_sources rs on rs.id=r.id - join ${stats_db_name}.datasource d on d.id=rs.datasource - where d.name='Crossref') -select distinct peer_reviewed.id as id, true as peer_reviewed -from peer_reviewed -union all -select distinct r.id as id, false as peer_reviewed -from ${stats_db_name}.result r -left outer join peer_reviewed pr on pr.id=r.id -where pr.id is null; - --- Green OA: --- OA results that are hosted by an Institutional repository and have NOT been harvested from a DOAJ journal. -create table ${stats_db_name}.result_greenoa as -with result_green as ( - select distinct r.id as id - from ${stats_db_name}.result r - join ${stats_db_name}.result_datasources rd on rd.id=r.id - join ${stats_db_name}.datasource d on d.id=rd.datasource - left outer join ( - select rd.id from ${stats_db_name}.result_datasources rd - join ${stats_db_name}.datasource d on rd.datasource=d.id - join ${stats_db_name}.datasource_sources sds on sds.id=d.id - join ${stats_db_name}.datasource sd on sd.id=sds.datasource - where sd.name='DOAJ-ARTICLES' - ) as doaj on doaj.id=r.id - where r.bestlicence in ('Open Access', 'Open Source') and d.type='Institutional Repository' and doaj.id is null) -select distinct result_green.id, true as green -from result_green -union all -select distinct r.id as id, false as green -from ${stats_db_name}.result r -left outer join result_green rg on rg.id=r.id -where rg.id is null; - --- GOLD OA: --- OA results that have been harvested from a DOAJ journal. -create table ${stats_db_name}.result_gold as -with result_gold as ( - select distinct r.id as id - from ${stats_db_name}.result r - join ${stats_db_name}.result_datasources rd on rd.id=r.id - join ${stats_db_name}.datasource d on d.id=rd.datasource - join ${stats_db_name}.datasource_sources sds on sds.id=d.id - join ${stats_db_name}.datasource sd on sd.id=sds.datasource - where r.type='publication' and r.bestlicence='Open Access' and sd.name='DOAJ-Articles') -select distinct result_gold.id, true as gold -from result_gold -union all -select distinct r.id, false as gold -from ${stats_db_name}.result r -where r.id not in (select id from result_gold); - --- shortcut result-country through the organization affiliation -create table ${stats_db_name}.result_affiliated_country as -select r.id as id, o.country as country -from ${stats_db_name}.result r -join ${stats_db_name}.result_organization ro on ro.id=r.id -join ${stats_db_name}.organization o on o.id=ro.organization -where o.country is not null and o.country!=''; - --- shortcut result-country through datasource of deposition -create table ${stats_db_name}.result_deposited_country as -select r.id as id, o.country as country -from ${stats_db_name}.result r -join ${stats_db_name}.result_datasources rd on rd.id=r.id -join ${stats_db_name}.datasource d on d.id=rd.datasource -join ${stats_db_name}.datasource_organizations dor on dor.id=d.id -join ${stats_db_name}.organization o on o.id=dor.organization -where o.country is not null and o.country!=''; \ No newline at end of file diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_5.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_5.sql deleted file mode 100644 index f737c1ea6..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_5.sql +++ /dev/null @@ -1,55 +0,0 @@ --- replace the creation of the result view to include the boolean fields from the previous tables (green, gold, --- peer reviewed) -drop table if exists ${stats_db_name}.result_tmp; -CREATE TABLE ${stats_db_name}.result_tmp ( - id STRING, - title STRING, - publisher STRING, - journal STRING, - `date` STRING, - `year` INT, - bestlicence STRING, - access_mode STRING, - embargo_end_date STRING, - delayed BOOLEAN, - authors INT, - source STRING, - abstract BOOLEAN, - type STRING , - peer_reviewed BOOLEAN, - green BOOLEAN, - gold BOOLEAN) -clustered by (id) into 100 buckets stored as orc tblproperties('transactional'='true'); - -insert into ${stats_db_name}.result_tmp -select r.id, r.title, r.publisher, r.journal, r.`date`, date_format(r.`date`, 'yyyy'), r.bestlicence, r.bestlicence, r.embargo_end_date, r.delayed, r.authors, r.source, r.abstract, r.type, pr.peer_reviewed, green.green, gold.gold -FROM ${stats_db_name}.publication r -LEFT OUTER JOIN ${stats_db_name}.result_peerreviewed pr on pr.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_greenoa green on green.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_gold gold on gold.id=r.id; - -insert into ${stats_db_name}.result_tmp -select r.id, r.title, r.publisher, r.journal, r.`date`, date_format(r.`date`, 'yyyy'), r.bestlicence, r.bestlicence, r.embargo_end_date, r.delayed, r.authors, r.source, r.abstract, r.type, pr.peer_reviewed, green.green, gold.gold -FROM ${stats_db_name}.dataset r -LEFT OUTER JOIN ${stats_db_name}.result_peerreviewed pr on pr.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_greenoa green on green.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_gold gold on gold.id=r.id; - -insert into ${stats_db_name}.result_tmp -select r.id, r.title, r.publisher, r.journal, r.`date`, date_format(r.`date`, 'yyyy'), r.bestlicence, r.bestlicence, r.embargo_end_date, r.delayed, r.authors, r.source, r.abstract, r.type, pr.peer_reviewed, green.green, gold.gold -FROM ${stats_db_name}.software r -LEFT OUTER JOIN ${stats_db_name}.result_peerreviewed pr on pr.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_greenoa green on green.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_gold gold on gold.id=r.id; - -insert into ${stats_db_name}.result_tmp -select r.id, r.title, r.publisher, r.journal, r.`date`, date_format(r.`date`, 'yyyy'), r.bestlicence, r.bestlicence, r.embargo_end_date, r.delayed, r.authors, r.source, r.abstract, r.type, pr.peer_reviewed, green.green, gold.gold -FROM ${stats_db_name}.otherresearchproduct r -LEFT OUTER JOIN ${stats_db_name}.result_peerreviewed pr on pr.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_greenoa green on green.id=r.id -LEFT OUTER JOIN ${stats_db_name}.result_gold gold on gold.id=r.id; - -drop table if exists ${stats_db_name}.result; -drop view if exists ${stats_db_name}.result; -create table ${stats_db_name}.result stored as parquet as select * from ${stats_db_name}.result_tmp; -drop table ${stats_db_name}.result_tmp; \ No newline at end of file diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_6.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_6.sql deleted file mode 100644 index ced7bbc11..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_6.sql +++ /dev/null @@ -1,32 +0,0 @@ -------------------------------------------- ---- Extra tables, mostly used by indicators - -create table ${stats_db_name}.result_projectcount as -select r.id, count(distinct p.id) as count -from ${stats_db_name}.result r -left outer join ${stats_db_name}.result_projects rp on rp.id=r.id -left outer join ${stats_db_name}.project p on p.id=rp.project -group by r.id; - -create table ${stats_db_name}.result_fundercount as -select r.id, count(distinct p.funder) as count -from ${stats_db_name}.result r -left outer join ${stats_db_name}.result_projects rp on rp.id=r.id -left outer join ${stats_db_name}.project p on p.id=rp.project -group by r.id; - -create table ${stats_db_name}.project_resultcount as -with rcount as ( - select p.id as pid, count(distinct r.id) as `count`, r.type as type - from ${stats_db_name}.project p - left outer join ${stats_db_name}.result_projects rp on rp.project=p.id - left outer join ${stats_db_name}.result r on r.id=rp.id - group by r.type, p.id ) -select rcount.pid, sum(case when rcount.type='publication' then rcount.count else 0 end) as publications, - sum(case when rcount.type='dataset' then rcount.count else 0 end) as datasets, - sum(case when rcount.type='software' then rcount.count else 0 end) as software, - sum(case when rcount.type='other' then rcount.count else 0 end) as other -from rcount -group by rcount.pid; - -create view ${stats_db_name}.rndexpenditure as select * from stats_ext.rndexpediture \ No newline at end of file diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step17.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step17.sql deleted file mode 100644 index 5c102d014..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step17.sql +++ /dev/null @@ -1,207 +0,0 @@ ------------------------------------------------------- ------------------------------------------------------- --- Shadow schema table exchange ------------------------------------------------------- ------------------------------------------------------- - --- Dropping old views -DROP VIEW IF EXISTS ${stats_db_shadow_name}.category; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.concept; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.context; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.country; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.countrygdp; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.creation_date; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_citations; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_classifications; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_concepts; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_datasources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_languages; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_licenses; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_oids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_pids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_refereed; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_sources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.dataset_topics; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.datasource; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.datasource_languages; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.datasource_oids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.datasource_organizations; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.datasource_results; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.datasource_sources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.funder; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.fundref; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.numbers_country; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.organization; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.organization_datasources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.organization_pids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.organization_projects; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.organization_sources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_citations; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_classifications; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_concepts; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_datasources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_languages; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_licenses; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_oids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_pids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_refereed; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_sources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.otherresearchproduct_topics; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.project; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.project_oids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.project_organizations; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.project_results; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.project_resultcount; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.project_results_publication; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_citations; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_classifications; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_concepts; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_datasources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_languages; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_licenses; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_oids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_pids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_refereed; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_sources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.publication_topics; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_affiliated_country; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_citations; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_classifications; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_concepts; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_datasources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_deposited_country; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_fundercount; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_gold; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_greenoa; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_languages; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_licenses; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_oids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_organization; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_peerreviewed; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_pids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_projectcount; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_projects; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_refereed; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_sources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.result_topics; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.rndexpediture; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.roarmap; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_citations; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_classifications; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_concepts; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_datasources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_languages; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_licenses; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_oids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_pids; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_refereed; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_sources; -DROP VIEW IF EXISTS ${stats_db_shadow_name}.software_topics; - - --- Creating the shadow database, in case it doesn't exist -CREATE database IF NOT EXISTS ${stats_db_shadow_name}; - --- Creating new views -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.category AS SELECT * FROM ${stats_db_name}.category; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.concept AS SELECT * FROM ${stats_db_name}.concept; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.context AS SELECT * FROM ${stats_db_name}.context; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.country AS SELECT * FROM ${stats_db_name}.country; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.countrygdp AS SELECT * FROM ${stats_db_name}.countrygdp; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.creation_date AS SELECT * FROM ${stats_db_name}.creation_date; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset AS SELECT * FROM ${stats_db_name}.dataset; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_citations AS SELECT * FROM ${stats_db_name}.dataset_citations; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_classifications AS SELECT * FROM ${stats_db_name}.dataset_classifications; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_concepts AS SELECT * FROM ${stats_db_name}.dataset_concepts; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_datasources AS SELECT * FROM ${stats_db_name}.dataset_datasources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_languages AS SELECT * FROM ${stats_db_name}.dataset_languages; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_licenses AS SELECT * FROM ${stats_db_name}.dataset_licenses; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_oids AS SELECT * FROM ${stats_db_name}.dataset_oids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_pids AS SELECT * FROM ${stats_db_name}.dataset_pids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_refereed AS SELECT * FROM ${stats_db_name}.dataset_refereed; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_sources AS SELECT * FROM ${stats_db_name}.dataset_sources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.dataset_topics AS SELECT * FROM ${stats_db_name}.dataset_topics; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.datasource AS SELECT * FROM ${stats_db_name}.datasource; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.datasource_languages AS SELECT * FROM ${stats_db_name}.datasource_languages; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.datasource_oids AS SELECT * FROM ${stats_db_name}.datasource_oids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.datasource_organizations AS SELECT * FROM ${stats_db_name}.datasource_organizations; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.datasource_results AS SELECT * FROM ${stats_db_name}.datasource_results; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.datasource_sources AS SELECT * FROM ${stats_db_name}.datasource_sources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.funder AS SELECT * FROM ${stats_db_name}.funder; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.fundref AS SELECT * FROM ${stats_db_name}.fundref; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.numbers_country AS SELECT * FROM ${stats_db_name}.numbers_country; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.organization AS SELECT * FROM ${stats_db_name}.organization; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.organization_datasources AS SELECT * FROM ${stats_db_name}.organization_datasources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.organization_pids AS SELECT * FROM ${stats_db_name}.organization_pids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.organization_projects AS SELECT * FROM ${stats_db_name}.organization_projects; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.organization_sources AS SELECT * FROM ${stats_db_name}.organization_sources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct AS SELECT * FROM ${stats_db_name}.otherresearchproduct; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_citations AS SELECT * FROM ${stats_db_name}.otherresearchproduct_citations; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_classifications AS SELECT * FROM ${stats_db_name}.otherresearchproduct_classifications; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_concepts AS SELECT * FROM ${stats_db_name}.otherresearchproduct_concepts; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_datasources AS SELECT * FROM ${stats_db_name}.otherresearchproduct_datasources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_languages AS SELECT * FROM ${stats_db_name}.otherresearchproduct_languages; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_licenses AS SELECT * FROM ${stats_db_name}.otherresearchproduct_licenses; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_oids AS SELECT * FROM ${stats_db_name}.otherresearchproduct_oids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_pids AS SELECT * FROM ${stats_db_name}.otherresearchproduct_pids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_refereed AS SELECT * FROM ${stats_db_name}.otherresearchproduct_refereed; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_sources AS SELECT * FROM ${stats_db_name}.otherresearchproduct_sources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.otherresearchproduct_topics AS SELECT * FROM ${stats_db_name}.otherresearchproduct_topics; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.project AS SELECT * FROM ${stats_db_name}.project; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.project_oids AS SELECT * FROM ${stats_db_name}.project_oids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.project_organizations AS SELECT * FROM ${stats_db_name}.project_organizations; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.project_results AS SELECT * FROM ${stats_db_name}.project_results; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.project_resultcount AS SELECT * FROM ${stats_db_name}.project_resultcount; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.project_results_publication AS SELECT * FROM ${stats_db_name}.project_results_publication; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication AS SELECT * FROM ${stats_db_name}.publication; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_citations AS SELECT * FROM ${stats_db_name}.publication_citations; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_classifications AS SELECT * FROM ${stats_db_name}.publication_classifications; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_concepts AS SELECT * FROM ${stats_db_name}.publication_concepts; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_datasources AS SELECT * FROM ${stats_db_name}.publication_datasources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_languages AS SELECT * FROM ${stats_db_name}.publication_languages; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_licenses AS SELECT * FROM ${stats_db_name}.publication_licenses; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_oids AS SELECT * FROM ${stats_db_name}.publication_oids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_pids AS SELECT * FROM ${stats_db_name}.publication_pids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_refereed AS SELECT * FROM ${stats_db_name}.publication_refereed; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_sources AS SELECT * FROM ${stats_db_name}.publication_sources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.publication_topics AS SELECT * FROM ${stats_db_name}.publication_topics; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result AS SELECT * FROM ${stats_db_name}.result; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_affiliated_country AS SELECT * FROM ${stats_db_name}.result_affiliated_country; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_citations AS SELECT * FROM ${stats_db_name}.result_citations; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_classifications AS SELECT * FROM ${stats_db_name}.result_classifications; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_concepts AS SELECT * FROM ${stats_db_name}.result_concepts; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_datasources AS SELECT * FROM ${stats_db_name}.result_datasources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_deposited_country AS SELECT * FROM ${stats_db_name}.result_deposited_country; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_fundercount AS SELECT * FROM ${stats_db_name}.result_fundercount; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_gold AS SELECT * FROM ${stats_db_name}.result_gold; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_greenoa AS SELECT * FROM ${stats_db_name}.result_greenoa; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_languages AS SELECT * FROM ${stats_db_name}.result_languages; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_licenses AS SELECT * FROM ${stats_db_name}.result_licenses; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_oids AS SELECT * FROM ${stats_db_name}.result_oids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_organization AS SELECT * FROM ${stats_db_name}.result_organization; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_peerreviewed AS SELECT * FROM ${stats_db_name}.result_peerreviewed; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_pids AS SELECT * FROM ${stats_db_name}.result_pids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_projectcount AS SELECT * FROM ${stats_db_name}.result_projectcount; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_projects AS SELECT * FROM ${stats_db_name}.result_projects; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_refereed AS SELECT * FROM ${stats_db_name}.result_refereed; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_sources AS SELECT * FROM ${stats_db_name}.result_sources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.result_topics AS SELECT * FROM ${stats_db_name}.result_topics; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.rndexpediture AS SELECT * FROM ${stats_db_name}.rndexpediture; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.roarmap AS SELECT * FROM ${stats_db_name}.roarmap; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software AS SELECT * FROM ${stats_db_name}.software; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_citations AS SELECT * FROM ${stats_db_name}.software_citations; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_classifications AS SELECT * FROM ${stats_db_name}.software_classifications; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_concepts AS SELECT * FROM ${stats_db_name}.software_concepts; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_datasources AS SELECT * FROM ${stats_db_name}.software_datasources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_languages AS SELECT * FROM ${stats_db_name}.software_languages; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_licenses AS SELECT * FROM ${stats_db_name}.software_licenses; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_oids AS SELECT * FROM ${stats_db_name}.software_oids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_pids AS SELECT * FROM ${stats_db_name}.software_pids; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_refereed AS SELECT * FROM ${stats_db_name}.software_refereed; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_sources AS SELECT * FROM ${stats_db_name}.software_sources; -CREATE VIEW IF NOT EXISTS ${stats_db_shadow_name}.software_topics AS SELECT * FROM ${stats_db_name}.software_topics; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step19.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step19.sql deleted file mode 100644 index 34e48a18a..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step19.sql +++ /dev/null @@ -1,8 +0,0 @@ ------------------------------------------------------- ------------------------------------------------------- --- Impala table statistics - Needed to make the tables --- visible for impala ------------------------------------------------------- ------------------------------------------------------- - -INVALIDATE METADATA ${stats_db_name}; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step2.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step2.sql deleted file mode 100644 index ba0db25be..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step2.sql +++ /dev/null @@ -1,44 +0,0 @@ --------------------------------------------------------------- --------------------------------------------------------------- --- Publication table/view and Publication related tables/views --------------------------------------------------------------- --------------------------------------------------------------- - --- Publication temporary table -DROP TABLE IF EXISTS ${stats_db_name}.publication_tmp; - -CREATE TABLE ${stats_db_name}.publication_tmp (id STRING, title STRING, publisher STRING, journal STRING, date STRING, year STRING, bestlicence STRING, embargo_end_date STRING, delayed BOOLEAN, authors INT, source STRING, abstract BOOLEAN, type STRING ) clustered by (id) into 100 buckets stored as orc tblproperties('transactional'='true'); - -INSERT INTO ${stats_db_name}.publication_tmp SELECT substr(p.id, 4) as id, p.title[0].value as title, p.publisher.value as publisher, p.journal.name as journal , -p.dateofacceptance.value as date, date_format(p.dateofacceptance.value,'yyyy') as year, p.bestaccessright.classname as bestlicence, -p.embargoenddate.value as embargo_end_date, false as delayed, size(p.author) as authors , concat_ws('\u003B',p.source.value) as source, -case when size(p.description) > 0 then true else false end as abstract, -'publication' as type -from ${openaire_db_name}.publication p -where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.publication_classifications AS SELECT substr(p.id, 4) as id, instancetype.classname as type from ${openaire_db_name}.publication p LATERAL VIEW explode(p.instance.instancetype) instances as instancetype where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.publication_concepts AS SELECT substr(p.id, 4) as id, contexts.context.id as concept from ${openaire_db_name}.publication p LATERAL VIEW explode(p.context) contexts as context where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.publication_datasources as -SELECT p.id, case when d.id is null then 'other' else p.datasource end as datasource - FROM ( - SELECT substr(p.id, 4) as id, substr(instances.instance.hostedby.key, 4) as datasource - from ${openaire_db_name}.publication p lateral view explode(p.instance) instances as instance - where p.datainfo.deletedbyinference=false ) p - LEFT OUTER JOIN ( - SELECT substr(d.id, 4) id - from ${openaire_db_name}.datasource d - WHERE d.datainfo.deletedbyinference=false ) d on p.datasource = d.id; - -CREATE TABLE ${stats_db_name}.publication_languages AS select substr(p.id, 4) as id, p.language.classname as language FROM ${openaire_db_name}.publication p where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.publication_oids AS SELECT substr(p.id, 4) AS id, oids.ids AS oid FROM ${openaire_db_name}.publication p LATERAL VIEW explode(p.originalid) oids AS ids where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.publication_pids AS SELECT substr(p.id, 4) AS id, ppid.qualifier.classname AS type, ppid.value as pid FROM ${openaire_db_name}.publication p LATERAL VIEW explode(p.pid) pids AS ppid where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.publication_topics as select substr(p.id, 4) AS id, subjects.subject.qualifier.classname AS TYPE, subjects.subject.value AS topic FROM ${openaire_db_name}.publication p LATERAL VIEW explode(p.subject) subjects AS subject where p.datainfo.deletedbyinference=false; - --- Publication_citations -CREATE TABLE ${stats_db_name}.publication_citations AS SELECT substr(p.id, 4) AS id, xpath_string(citation.value, "//citation/id[@type='openaire']/@value") AS result FROM ${openaire_db_name}.publication p lateral view explode(p.extrainfo) citations AS citation WHERE xpath_string(citation.value, "//citation/id[@type='openaire']/@value") !="" and p.datainfo.deletedbyinference=false; \ No newline at end of file diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step3.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step3.sql deleted file mode 100644 index f69715a31..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step3.sql +++ /dev/null @@ -1,36 +0,0 @@ ------------------------------------------------------- ------------------------------------------------------- --- Dataset table/view and Dataset related tables/views ------------------------------------------------------- ------------------------------------------------------- - --- Dataset temporary table supporting updates -DROP TABLE IF EXISTS ${stats_db_name}.dataset_tmp; -CREATE TABLE ${stats_db_name}.dataset_tmp (id STRING, title STRING, publisher STRING, journal STRING, date STRING, year STRING, bestlicence STRING, embargo_end_date STRING, delayed BOOLEAN, authors INT, source STRING, abstract BOOLEAN, type STRING ) clustered by (id) into 100 buckets stored AS orc tblproperties('transactional'='true'); - -INSERT INTO ${stats_db_name}.dataset_tmp SELECT substr(d.id, 4) AS id, d.title[0].value AS title, d.publisher.value AS publisher, cast(null AS string) AS journal, -d.dateofacceptance.value as date, date_format(d.dateofacceptance.value,'yyyy') AS year, d.bestaccessright.classname AS bestlicence, -d.embargoenddate.value AS embargo_end_date, false AS delayed, size(d.author) AS authors , concat_ws('\u003B',d.source.value) AS source, - CASE WHEN SIZE(d.description) > 0 THEN TRUE ELSE FALSE end AS abstract, -'dataset' AS type -FROM ${openaire_db_name}.dataset d -WHERE d.datainfo.deletedbyinference=FALSE; - --- Dataset_citations -CREATE TABLE ${stats_db_name}.dataset_citations AS SELECT substr(d.id, 4) AS id, xpath_string(citation.value, "//citation/id[@type='openaire']/@value") AS result FROM ${openaire_db_name}.dataset d LATERAL VIEW explode(d.extrainfo) citations AS citation WHERE xpath_string(citation.value, "//citation/id[@type='openaire']/@value") !="" and d.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.dataset_classifications AS SELECT substr(p.id, 4) AS id, instancetype.classname AS type FROM ${openaire_db_name}.dataset p LATERAL VIEW explode(p.instance.instancetype) instances AS instancetype where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.dataset_concepts AS SELECT substr(p.id, 4) as id, contexts.context.id as concept from ${openaire_db_name}.dataset p LATERAL VIEW explode(p.context) contexts as context where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.dataset_datasources AS SELECT p.id, case when d.id IS NULL THEN 'other' ELSE p.datasource END AS datasource FROM (SELECT substr(p.id, 4) as id, substr(instances.instance.hostedby.key, 4) AS datasource -FROM ${openaire_db_name}.dataset p LATERAL VIEW explode(p.instance) instances AS instance where p.datainfo.deletedbyinference=false) p LEFT OUTER JOIN -(SELECT substr(d.id, 4) id FROM ${openaire_db_name}.datasource d WHERE d.datainfo.deletedbyinference=false) d ON p.datasource = d.id; - -CREATE TABLE ${stats_db_name}.dataset_languages AS SELECT substr(p.id, 4) AS id, p.language.classname AS language FROM ${openaire_db_name}.dataset p where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.dataset_oids AS SELECT substr(p.id, 4) AS id, oids.ids AS oid FROM ${openaire_db_name}.dataset p LATERAL VIEW explode(p.originalid) oids AS ids where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.dataset_pids AS SELECT substr(p.id, 4) AS id, ppid.qualifier.classname AS type, ppid.value AS pid FROM ${openaire_db_name}.dataset p LATERAL VIEW explode(p.pid) pids AS ppid where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.dataset_topics AS SELECT substr(p.id, 4) AS id, subjects.subject.qualifier.classname AS type, subjects.subject.value AS topic FROM ${openaire_db_name}.dataset p LATERAL VIEW explode(p.subject) subjects AS subject where p.datainfo.deletedbyinference=false; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step4.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step4.sql deleted file mode 100644 index 2c4a625e1..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step4.sql +++ /dev/null @@ -1,36 +0,0 @@ --------------------------------------------------------- --------------------------------------------------------- --- Software table/view and Software related tables/views --------------------------------------------------------- --------------------------------------------------------- - --- Software temporary table supporting updates -DROP TABLE IF EXISTS ${stats_db_name}.software_tmp; -CREATE TABLE ${stats_db_name}.software_tmp (id STRING, title STRING, publisher STRING, journal STRING, date STRING, year STRING, bestlicence STRING, embargo_end_date STRING, delayed BOOLEAN, authors INT, source STRING, abstract BOOLEAN, type STRING ) clustered by (id) INTO 100 buckets stored AS orc tblproperties('transactional'='true'); - -INSERT INTO ${stats_db_name}.software_tmp SELECT substr(s.id, 4) as id, s.title[0].value AS title, s.publisher.value AS publisher, CAST(NULL AS string) AS journal, -s.dateofacceptance.value AS DATE, date_format(s.dateofacceptance.value,'yyyy') AS YEAR, s.bestaccessright.classname AS bestlicence, -s.embargoenddate.value AS embargo_end_date, FALSE AS delayed, SIZE(s.author) AS authors , concat_ws('\u003B',s.source.value) AS source, - CASE WHEN SIZE(s.description) > 0 THEN TRUE ELSE FALSE END AS abstract, -'software' as type -from ${openaire_db_name}.software s -where s.datainfo.deletedbyinference=false; - --- Software_citations -CREATE TABLE ${stats_db_name}.software_citations AS SELECT substr(s.id, 4) as id, xpath_string(citation.value, "//citation/id[@type='openaire']/@value") AS RESULT FROM ${openaire_db_name}.software s LATERAL VIEW explode(s.extrainfo) citations as citation where xpath_string(citation.value, "//citation/id[@type='openaire']/@value") !="" and s.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.software_classifications AS SELECT substr(p.id, 4) AS id, instancetype.classname AS type FROM ${openaire_db_name}.software p LATERAL VIEW explode(p.instance.instancetype) instances AS instancetype where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.software_concepts AS SELECT substr(p.id, 4) AS id, contexts.context.id AS concept FROM ${openaire_db_name}.software p LATERAL VIEW explode(p.context) contexts AS context where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.software_datasources AS SELECT p.id, CASE WHEN d.id IS NULL THEN 'other' ELSE p.datasource end as datasource FROM (SELECT substr(p.id, 4) AS id, substr(instances.instance.hostedby.key, 4) AS datasource -FROM ${openaire_db_name}.software p LATERAL VIEW explode(p.instance) instances AS instance where p.datainfo.deletedbyinference=false) p LEFT OUTER JOIN -(SELECT substr(d.id, 4) id FROM ${openaire_db_name}.datasource d WHERE d.datainfo.deletedbyinference=false) d ON p.datasource = d.id; - -CREATE TABLE ${stats_db_name}.software_languages AS select substr(p.id, 4) AS id, p.language.classname AS language FROM ${openaire_db_name}.software p where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.software_oids AS SELECT substr(p.id, 4) AS id, oids.ids AS oid FROM ${openaire_db_name}.software p LATERAL VIEW explode(p.originalid) oids AS ids where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.software_pids AS SELECT substr(p.id, 4) AS id, ppid.qualifier.classname AS type, ppid.value AS pid FROM ${openaire_db_name}.software p LATERAL VIEW explode(p.pid) pids AS ppid where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.software_topics AS SELECT substr(p.id, 4) AS id, subjects.subject.qualifier.classname AS type, subjects.subject.value AS topic FROM ${openaire_db_name}.software p LATERAL VIEW explode(p.subject) subjects AS subject where p.datainfo.deletedbyinference=false; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step5.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step5.sql deleted file mode 100644 index 1fa5df8cb..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step5.sql +++ /dev/null @@ -1,36 +0,0 @@ --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- --- Otherresearchproduct table/view and Otherresearchproduct related tables/views --------------------------------------------------------------------------------- --------------------------------------------------------------------------------- - --- Otherresearchproduct temporary table supporting updates -DROP TABLE IF EXISTS ${stats_db_name}.otherresearchproduct_tmp; -CREATE TABLE ${stats_db_name}.otherresearchproduct_tmp ( id STRING, title STRING, publisher STRING, journal STRING, date STRING, year STRING, bestlicence STRING, embargo_end_date STRING, delayed BOOLEAN, authors INT, source STRING, abstract BOOLEAN, type STRING ) CLUSTERED BY (id) INTO 100 buckets stored AS orc tblproperties('transactional'='true'); - -INSERT INTO ${stats_db_name}.otherresearchproduct_tmp SELECT substr(o.id, 4) AS id, o.title[0].value AS title, o.publisher.value AS publisher, CAST(NULL AS string) AS journal, -o.dateofacceptance.value AS DATE, date_format(o.dateofacceptance.value,'yyyy') AS year, o.bestaccessright.classname AS bestlicence, -o.embargoenddate.value as embargo_end_date, FALSE AS delayed, SIZE(o.author) AS authors , concat_ws('\u003B',o.source.value) AS source, -CASE WHEN SIZE(o.description) > 0 THEN TRUE ELSE FALSE END AS abstract, -'other' AS type -FROM ${openaire_db_name}.otherresearchproduct o -WHERE o.datainfo.deletedbyinference=FALSE; - --- Otherresearchproduct_citations -CREATE TABLE ${stats_db_name}.otherresearchproduct_citations AS SELECT substr(o.id, 4) AS id, xpath_string(citation.value, "//citation/id[@type='openaire']/@value") AS RESULT FROM ${openaire_db_name}.otherresearchproduct o LATERAL VIEW explode(o.extrainfo) citations AS citation WHERE xpath_string(citation.value, "//citation/id[@type='openaire']/@value") !="" and o.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.otherresearchproduct_classifications AS SELECT substr(p.id, 4) AS id, instancetype.classname AS type FROM ${openaire_db_name}.otherresearchproduct p LATERAL VIEW explode(p.instance.instancetype) instances AS instancetype where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.otherresearchproduct_concepts AS SELECT substr(p.id, 4) AS id, contexts.context.id AS concept FROM ${openaire_db_name}.otherresearchproduct p LATERAL VIEW explode(p.context) contexts AS context where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.otherresearchproduct_datasources AS SELECT p.id, CASE WHEN d.id IS NULL THEN 'other' ELSE p.datasource END AS datasource FROM (SELECT substr(p.id, 4) AS id, substr(instances.instance.hostedby.key, 4) AS datasource -from ${openaire_db_name}.otherresearchproduct p lateral view explode(p.instance) instances as instance where p.datainfo.deletedbyinference=false) p LEFT OUTER JOIN -(SELECT substr(d.id, 4) id from ${openaire_db_name}.datasource d WHERE d.datainfo.deletedbyinference=false) d on p.datasource = d.id; - -CREATE TABLE ${stats_db_name}.otherresearchproduct_languages AS SELECT substr(p.id, 4) AS id, p.language.classname AS language FROM ${openaire_db_name}.otherresearchproduct p where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.otherresearchproduct_oids AS SELECT substr(p.id, 4) AS id, oids.ids AS oid FROM ${openaire_db_name}.otherresearchproduct p LATERAL VIEW explode(p.originalid) oids AS ids where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.otherresearchproduct_pids AS SELECT substr(p.id, 4) AS id, ppid.qualifier.classname AS type, ppid.value AS pid FROM ${openaire_db_name}.otherresearchproduct p LATERAL VIEW explode(p.pid) pids AS ppid where p.datainfo.deletedbyinference=false; - -CREATE TABLE ${stats_db_name}.otherresearchproduct_topics AS SELECT substr(p.id, 4) AS id, subjects.subject.qualifier.classname AS type, subjects.subject.value AS topic FROM ${openaire_db_name}.otherresearchproduct p LATERAL VIEW explode(p.subject) subjects AS subject where p.datainfo.deletedbyinference=false; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step6.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step6.sql deleted file mode 100644 index 21a944164..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step6.sql +++ /dev/null @@ -1,30 +0,0 @@ --- noinspection SqlNoDataSourceInspectionForFile - ------------------------------------------------------- ------------------------------------------------------- --- Project table/view and Project related tables/views ------------------------------------------------------- ------------------------------------------------------- --- Project_oids Table -DROP TABLE IF EXISTS ${stats_db_name}.project_oids; -CREATE TABLE ${stats_db_name}.project_oids AS SELECT substr(p.id, 4) AS id, oids.ids AS oid FROM ${openaire_db_name}.project p LATERAL VIEW explode(p.originalid) oids AS ids; - --- Project_organizations Table -DROP TABLE IF EXISTS ${stats_db_name}.project_organizations; -CREATE TABLE ${stats_db_name}.project_organizations AS SELECT substr(r.source, 4) AS id, substr(r.target, 4) AS organization from ${openaire_db_name}.relation r WHERE r.reltype='projectOrganization'; - --- Project_results Table -DROP TABLE IF EXISTS ${stats_db_name}.project_results; -CREATE TABLE ${stats_db_name}.project_results AS SELECT substr(r.target, 4) AS id, substr(r.source, 4) AS result FROM ${openaire_db_name}.relation r WHERE r.reltype='resultProject' and r.datainfo.deletedbyinference=false; - --- Project table ----------------- --- Creating and populating temporary Project table -DROP TABLE IF EXISTS ${stats_db_name}.project_tmp; -CREATE TABLE ${stats_db_name}.project_tmp (id STRING, acronym STRING, title STRING, funder STRING, funding_lvl0 STRING, funding_lvl1 STRING, funding_lvl2 STRING, ec39 STRING, type STRING, startdate STRING, enddate STRING, start_year INT, end_year INT, duration INT, haspubs STRING, numpubs INT, daysforlastpub INT, delayedpubs INT, callidentifier STRING, code STRING) CLUSTERED BY (id) INTO 100 buckets stored AS orc tblproperties('transactional'='true'); - -INSERT INTO ${stats_db_name}.project_tmp SELECT substr(p.id, 4) AS id, p.acronym.value AS acronym, p.title.value AS title, xpath_string(p.fundingtree[0].value, '//funder/name') AS funder, xpath_string(p.fundingtree[0].value, '//funding_level_0/name') AS funding_lvl0, xpath_string(p.fundingtree[0].value, '//funding_level_1/name') AS funding_lvl1, xpath_string(p.fundingtree[0].value, '//funding_level_2/name') AS funding_lvl2, p.ecsc39.value AS ec39, p.contracttype.classname AS type, p.startdate.value AS startdate, p.enddate.value AS enddate, year(p.startdate.value) AS start_year, year(p.enddate.value) AS end_year, CAST(MONTHS_BETWEEN(p.enddate.value, p.startdate.value) AS INT) AS duration, 'no' AS haspubs, 0 AS numpubs, 0 AS daysforlastpub, 0 AS delayedpubs, p.callidentifier.value AS callidentifier, p.code.value AS code FROM ${openaire_db_name}.project p WHERE p.datainfo.deletedbyinference=false; - -create table ${stats_db_name}.funder as -select distinct xpath_string(fund, '//funder/id') as id, xpath_string(fund, '//funder/name') as name, xpath_string(fund, '//funder/shortname') as shortname -from ${openaire_db_name}.project p lateral view explode(p.fundingtree.value) fundingtree as fund diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step7.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step7.sql deleted file mode 100644 index 7acabf1dd..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step7.sql +++ /dev/null @@ -1,31 +0,0 @@ ----------------------------------------------------- ----------------------------------------------------- --- Result table/view and Result related tables/views ----------------------------------------------------- ----------------------------------------------------- - --- Views on temporary tables that should be re-created in the end -CREATE OR REPLACE VIEW ${stats_db_name}.result as SELECT *, bestlicence AS access_mode FROM ${stats_db_name}.publication_tmp UNION ALL SELECT *,bestlicence AS access_mode FROM ${stats_db_name}.software_tmp UNION ALL SELECT *,bestlicence AS access_mode FROM ${stats_db_name}.dataset_tmp UNION ALL SELECT *,bestlicence AS access_mode FROM ${stats_db_name}.otherresearchproduct_tmp; - --- Views on final tables -CREATE OR REPLACE VIEW ${stats_db_name}.result_datasources AS SELECT * FROM ${stats_db_name}.publication_datasources UNION ALL SELECT * FROM ${stats_db_name}.software_datasources UNION ALL SELECT * FROM ${stats_db_name}.dataset_datasources UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_datasources; - -CREATE OR REPLACE VIEW ${stats_db_name}.result_citations AS SELECT * FROM ${stats_db_name}.publication_citations UNION ALL SELECT * FROM ${stats_db_name}.software_citations UNION ALL SELECT * FROM ${stats_db_name}.dataset_citations UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_citations; - -CREATE OR REPLACE VIEW ${stats_db_name}.result_classifications AS SELECT * FROM ${stats_db_name}.publication_classifications UNION ALL SELECT * FROM ${stats_db_name}.software_classifications UNION ALL SELECT * FROM ${stats_db_name}.dataset_classifications UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_classifications; - -CREATE OR REPLACE VIEW ${stats_db_name}.result_concepts AS SELECT * FROM ${stats_db_name}.publication_concepts UNION ALL SELECT * FROM ${stats_db_name}.software_concepts UNION ALL SELECT * FROM ${stats_db_name}.dataset_concepts UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_concepts; - -CREATE OR REPLACE VIEW ${stats_db_name}.result_languages AS SELECT * FROM ${stats_db_name}.publication_languages UNION ALL SELECT * FROM ${stats_db_name}.software_languages UNION ALL SELECT * FROM ${stats_db_name}.dataset_languages UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_languages; - -CREATE OR REPLACE VIEW ${stats_db_name}.result_oids AS SELECT * FROM ${stats_db_name}.publication_oids UNION ALL SELECT * FROM ${stats_db_name}.software_oids UNION ALL SELECT * FROM ${stats_db_name}.dataset_oids UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_oids; - -CREATE OR REPLACE VIEW ${stats_db_name}.result_pids AS SELECT * FROM ${stats_db_name}.publication_pids UNION ALL SELECT * FROM ${stats_db_name}.software_pids UNION ALL SELECT * FROM ${stats_db_name}.dataset_pids UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_pids; - -CREATE OR REPLACE VIEW ${stats_db_name}.result_topics AS SELECT * FROM ${stats_db_name}.publication_topics UNION ALL SELECT * FROM ${stats_db_name}.software_topics UNION ALL SELECT * FROM ${stats_db_name}.dataset_topics UNION ALL SELECT * FROM ${stats_db_name}.otherresearchproduct_topics; - -DROP TABLE IF EXISTS ${stats_db_name}.result_organization; -CREATE TABLE ${stats_db_name}.result_organization AS SELECT substr(r.target, 4) AS id, substr(r.source, 4) AS organization FROM ${openaire_db_name}.relation r WHERE r.reltype='resultOrganization'; - -DROP TABLE IF EXISTS ${stats_db_name}.result_projects; -CREATE TABLE ${stats_db_name}.result_projects AS select pr.result AS id, pr.id AS project, datediff(p.enddate, p.startdate) AS daysfromend FROM ${stats_db_name}.result r JOIN ${stats_db_name}.project_results pr ON r.id=pr.result JOIN ${stats_db_name}.project_tmp p ON p.id=pr.id; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step8.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step8.sql deleted file mode 100644 index 4e13b3dd8..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step8.sql +++ /dev/null @@ -1,58 +0,0 @@ --- noinspection SqlNoDataSourceInspectionForFile - ------------------------------------------------------------- ------------------------------------------------------------- --- Datasource table/view and Datasource related tables/views ------------------------------------------------------------- ------------------------------------------------------------- - --- Datasource table creation & update -------------------------------------- --- Creating and populating temporary datasource table -DROP TABLE IF EXISTS ${stats_db_name}.datasource_tmp; -CREATE TABLE ${stats_db_name}.datasource_tmp(`id` string, `name` STRING, `type` STRING, `dateofvalidation` STRING, `yearofvalidation` string, `harvested` BOOLEAN, `piwik_id` INT, `latitude` STRING, `longitude`STRING, `websiteurl` STRING, `compatibility` STRING) CLUSTERED BY (id) INTO 100 buckets stored AS orc tblproperties('transactional'='true'); - --- Insert statement that takes into account the piwik_id of the openAIRE graph -INSERT INTO ${stats_db_name}.datasource_tmp -SELECT substr(d1.id, 4) AS id, officialname.value AS name, -datasourcetype.classname AS type, dateofvalidation.value AS dateofvalidation, date_format(d1.dateofvalidation.value,'yyyy') AS yearofvalidation, -FALSE AS harvested, -CASE WHEN d2.piwik_id IS NULL THEN 0 ELSE d2.piwik_id END AS piwik_id, -d1.latitude.value AS latitude, d1.longitude.value AS longitude, -d1.websiteurl.value AS websiteurl, d1.openairecompatibility.classid AS compatibility -FROM ${openaire_db_name}.datasource d1 -LEFT OUTER JOIN -(SELECT id, split(originalidd, '\\:')[1] as piwik_id -FROM ${openaire_db_name}.datasource -LATERAL VIEW EXPLODE(originalid) temp AS originalidd -WHERE originalidd like "piwik:%") AS d2 -ON d1.id = d2.id -WHERE d1.datainfo.deletedbyinference=FALSE; - --- Updating temporary table with everything that is not based on results -> This is done with the following "dual" table. --- Creating a temporary dual table that will be removed after the following insert -CREATE TABLE ${stats_db_name}.dual(dummy CHAR(1)); -INSERT INTO ${stats_db_name}.dual VALUES('X'); -INSERT INTO ${stats_db_name}.datasource_tmp (`id`, `name`, `type`, `dateofvalidation`, `yearofvalidation`, `harvested`, `piwik_id`, `latitude`, `longitude`, `websiteurl`, `compatibility`) -SELECT 'other', 'Other', 'Repository', NULL, NULL, false, 0, NULL, NULL, NULL, 'unknown' FROM ${stats_db_name}.dual WHERE 'other' not in (SELECT id FROM ${stats_db_name}.datasource_tmp WHERE name='Unknown Repository'); -DROP TABLE ${stats_db_name}.dual; - -UPDATE ${stats_db_name}.datasource_tmp SET name='Other' WHERE name='Unknown Repository'; -UPDATE ${stats_db_name}.datasource_tmp SET yearofvalidation=null WHERE yearofvalidation='-1'; - -DROP TABLE IF EXISTS ${stats_db_name}.datasource_languages; -CREATE TABLE ${stats_db_name}.datasource_languages AS SELECT substr(d.id, 4) AS id, langs.languages AS language FROM ${openaire_db_name}.datasource d LATERAL VIEW explode(d.odlanguages.value) langs AS languages; - -DROP TABLE IF EXISTS ${stats_db_name}.datasource_oids; -CREATE TABLE ${stats_db_name}.datasource_oids AS SELECT substr(d.id, 4) AS id, oids.ids AS oid FROM ${openaire_db_name}.datasource d LATERAL VIEW explode(d.originalid) oids AS ids; - -DROP TABLE IF EXISTS ${stats_db_name}.datasource_organizations; -CREATE TABLE ${stats_db_name}.datasource_organizations AS SELECT substr(r.target, 4) AS id, substr(r.source, 4) AS organization FROM ${openaire_db_name}.relation r WHERE r.reltype='datasourceOrganization'; - --- datasource sources: --- where the datasource info have been collected from. -create table if not exists ${stats_db_name}.datasource_sources AS select substr(d.id,4) as id, substr(cf.key, 4) as datasource from ${openaire_db_name}.datasource d lateral view explode(d.collectedfrom) cfrom as cf where d.datainfo.deletedbyinference=false; - -CREATE OR REPLACE VIEW ${stats_db_name}.datasource_results AS SELECT datasource AS id, id AS result FROM ${stats_db_name}.result_datasources; - - diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step9.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step9.sql deleted file mode 100644 index a918e4de4..000000000 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step9.sql +++ /dev/null @@ -1,12 +0,0 @@ ----------------------------------------------------------------- ----------------------------------------------------------------- --- Organization table/view and Organization related tables/views ----------------------------------------------------------------- ----------------------------------------------------------------- -DROP TABLE IF EXISTS ${stats_db_name}.organization; -CREATE TABLE IF NOT EXISTS ${stats_db_name}.organization AS SELECT substr(o.id, 4) as id, o.legalname.value as name, o.legalshortname.value as legalshortname, o.country.classid as country -FROM ${openaire_db_name}.organization o WHERE o.datainfo.deletedbyinference=FALSE; - -CREATE OR REPLACE VIEW ${stats_db_name}.organization_datasources AS SELECT organization AS id, id AS datasource FROM ${stats_db_name}.datasource_organizations; - -CREATE OR REPLACE VIEW ${stats_db_name}.organization_projects AS SELECT id AS project, organization as id FROM ${stats_db_name}.project_organizations; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/updateProductionViews.sql b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/updateProductionViews.sql new file mode 100644 index 000000000..48f8d58fd --- /dev/null +++ b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/updateProductionViews.sql @@ -0,0 +1,207 @@ +------------------------------------------------------ +------------------------------------------------------ +-- Shadow schema table exchange +------------------------------------------------------ +------------------------------------------------------ + +-- Dropping old views +DROP VIEW IF EXISTS ${stats_db_production_name}.category; +DROP VIEW IF EXISTS ${stats_db_production_name}.concept; +DROP VIEW IF EXISTS ${stats_db_production_name}.context; +DROP VIEW IF EXISTS ${stats_db_production_name}.country; +DROP VIEW IF EXISTS ${stats_db_production_name}.countrygdp; +DROP VIEW IF EXISTS ${stats_db_production_name}.creation_date; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_citations; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_classifications; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_concepts; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_datasources; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_languages; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_licenses; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_oids; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_pids; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_refereed; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_sources; +DROP VIEW IF EXISTS ${stats_db_production_name}.dataset_topics; +DROP VIEW IF EXISTS ${stats_db_production_name}.datasource; +DROP VIEW IF EXISTS ${stats_db_production_name}.datasource_languages; +DROP VIEW IF EXISTS ${stats_db_production_name}.datasource_oids; +DROP VIEW IF EXISTS ${stats_db_production_name}.datasource_organizations; +DROP VIEW IF EXISTS ${stats_db_production_name}.datasource_results; +DROP VIEW IF EXISTS ${stats_db_production_name}.datasource_sources; +DROP VIEW IF EXISTS ${stats_db_production_name}.funder; +DROP VIEW IF EXISTS ${stats_db_production_name}.fundref; +DROP VIEW IF EXISTS ${stats_db_production_name}.numbers_country; +DROP VIEW IF EXISTS ${stats_db_production_name}.organization; +DROP VIEW IF EXISTS ${stats_db_production_name}.organization_datasources; +DROP VIEW IF EXISTS ${stats_db_production_name}.organization_pids; +DROP VIEW IF EXISTS ${stats_db_production_name}.organization_projects; +DROP VIEW IF EXISTS ${stats_db_production_name}.organization_sources; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_citations; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_classifications; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_concepts; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_datasources; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_languages; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_licenses; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_oids; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_pids; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_refereed; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_sources; +DROP VIEW IF EXISTS ${stats_db_production_name}.otherresearchproduct_topics; +DROP VIEW IF EXISTS ${stats_db_production_name}.project; +DROP VIEW IF EXISTS ${stats_db_production_name}.project_oids; +DROP VIEW IF EXISTS ${stats_db_production_name}.project_organizations; +DROP VIEW IF EXISTS ${stats_db_production_name}.project_results; +DROP VIEW IF EXISTS ${stats_db_production_name}.project_resultcount; +DROP VIEW IF EXISTS ${stats_db_production_name}.project_results_publication; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_citations; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_classifications; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_concepts; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_datasources; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_languages; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_licenses; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_oids; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_pids; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_refereed; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_sources; +DROP VIEW IF EXISTS ${stats_db_production_name}.publication_topics; +DROP VIEW IF EXISTS ${stats_db_production_name}.result; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_affiliated_country; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_citations; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_classifications; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_concepts; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_datasources; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_deposited_country; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_fundercount; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_gold; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_greenoa; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_languages; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_licenses; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_oids; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_organization; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_peerreviewed; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_pids; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_projectcount; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_projects; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_refereed; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_sources; +DROP VIEW IF EXISTS ${stats_db_production_name}.result_topics; +DROP VIEW IF EXISTS ${stats_db_production_name}.rndexpediture; +DROP VIEW IF EXISTS ${stats_db_production_name}.roarmap; +DROP VIEW IF EXISTS ${stats_db_production_name}.software; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_citations; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_classifications; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_concepts; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_datasources; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_languages; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_licenses; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_oids; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_pids; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_refereed; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_sources; +DROP VIEW IF EXISTS ${stats_db_production_name}.software_topics; + + +-- Creating the shadow database, in case it doesn't exist +CREATE database IF NOT EXISTS ${stats_db_production_name}; + +-- Creating new views +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.category AS SELECT * FROM ${stats_db_name}.category; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.concept AS SELECT * FROM ${stats_db_name}.concept; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.context AS SELECT * FROM ${stats_db_name}.context; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.country AS SELECT * FROM ${stats_db_name}.country; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.countrygdp AS SELECT * FROM ${stats_db_name}.countrygdp; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.creation_date AS SELECT * FROM ${stats_db_name}.creation_date; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset AS SELECT * FROM ${stats_db_name}.dataset; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_citations AS SELECT * FROM ${stats_db_name}.dataset_citations; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_classifications AS SELECT * FROM ${stats_db_name}.dataset_classifications; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_concepts AS SELECT * FROM ${stats_db_name}.dataset_concepts; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_datasources AS SELECT * FROM ${stats_db_name}.dataset_datasources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_languages AS SELECT * FROM ${stats_db_name}.dataset_languages; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_licenses AS SELECT * FROM ${stats_db_name}.dataset_licenses; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_oids AS SELECT * FROM ${stats_db_name}.dataset_oids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_pids AS SELECT * FROM ${stats_db_name}.dataset_pids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_refereed AS SELECT * FROM ${stats_db_name}.dataset_refereed; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_sources AS SELECT * FROM ${stats_db_name}.dataset_sources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.dataset_topics AS SELECT * FROM ${stats_db_name}.dataset_topics; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.datasource AS SELECT * FROM ${stats_db_name}.datasource; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.datasource_languages AS SELECT * FROM ${stats_db_name}.datasource_languages; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.datasource_oids AS SELECT * FROM ${stats_db_name}.datasource_oids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.datasource_organizations AS SELECT * FROM ${stats_db_name}.datasource_organizations; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.datasource_results AS SELECT * FROM ${stats_db_name}.datasource_results; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.datasource_sources AS SELECT * FROM ${stats_db_name}.datasource_sources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.funder AS SELECT * FROM ${stats_db_name}.funder; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.fundref AS SELECT * FROM ${stats_db_name}.fundref; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.numbers_country AS SELECT * FROM ${stats_db_name}.numbers_country; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.organization AS SELECT * FROM ${stats_db_name}.organization; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.organization_datasources AS SELECT * FROM ${stats_db_name}.organization_datasources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.organization_pids AS SELECT * FROM ${stats_db_name}.organization_pids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.organization_projects AS SELECT * FROM ${stats_db_name}.organization_projects; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.organization_sources AS SELECT * FROM ${stats_db_name}.organization_sources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct AS SELECT * FROM ${stats_db_name}.otherresearchproduct; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_citations AS SELECT * FROM ${stats_db_name}.otherresearchproduct_citations; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_classifications AS SELECT * FROM ${stats_db_name}.otherresearchproduct_classifications; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_concepts AS SELECT * FROM ${stats_db_name}.otherresearchproduct_concepts; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_datasources AS SELECT * FROM ${stats_db_name}.otherresearchproduct_datasources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_languages AS SELECT * FROM ${stats_db_name}.otherresearchproduct_languages; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_licenses AS SELECT * FROM ${stats_db_name}.otherresearchproduct_licenses; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_oids AS SELECT * FROM ${stats_db_name}.otherresearchproduct_oids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_pids AS SELECT * FROM ${stats_db_name}.otherresearchproduct_pids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_refereed AS SELECT * FROM ${stats_db_name}.otherresearchproduct_refereed; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_sources AS SELECT * FROM ${stats_db_name}.otherresearchproduct_sources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.otherresearchproduct_topics AS SELECT * FROM ${stats_db_name}.otherresearchproduct_topics; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.project AS SELECT * FROM ${stats_db_name}.project; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.project_oids AS SELECT * FROM ${stats_db_name}.project_oids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.project_organizations AS SELECT * FROM ${stats_db_name}.project_organizations; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.project_results AS SELECT * FROM ${stats_db_name}.project_results; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.project_resultcount AS SELECT * FROM ${stats_db_name}.project_resultcount; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.project_results_publication AS SELECT * FROM ${stats_db_name}.project_results_publication; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication AS SELECT * FROM ${stats_db_name}.publication; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_citations AS SELECT * FROM ${stats_db_name}.publication_citations; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_classifications AS SELECT * FROM ${stats_db_name}.publication_classifications; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_concepts AS SELECT * FROM ${stats_db_name}.publication_concepts; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_datasources AS SELECT * FROM ${stats_db_name}.publication_datasources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_languages AS SELECT * FROM ${stats_db_name}.publication_languages; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_licenses AS SELECT * FROM ${stats_db_name}.publication_licenses; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_oids AS SELECT * FROM ${stats_db_name}.publication_oids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_pids AS SELECT * FROM ${stats_db_name}.publication_pids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_refereed AS SELECT * FROM ${stats_db_name}.publication_refereed; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_sources AS SELECT * FROM ${stats_db_name}.publication_sources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.publication_topics AS SELECT * FROM ${stats_db_name}.publication_topics; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result AS SELECT * FROM ${stats_db_name}.result; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_affiliated_country AS SELECT * FROM ${stats_db_name}.result_affiliated_country; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_citations AS SELECT * FROM ${stats_db_name}.result_citations; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_classifications AS SELECT * FROM ${stats_db_name}.result_classifications; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_concepts AS SELECT * FROM ${stats_db_name}.result_concepts; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_datasources AS SELECT * FROM ${stats_db_name}.result_datasources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_deposited_country AS SELECT * FROM ${stats_db_name}.result_deposited_country; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_fundercount AS SELECT * FROM ${stats_db_name}.result_fundercount; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_gold AS SELECT * FROM ${stats_db_name}.result_gold; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_greenoa AS SELECT * FROM ${stats_db_name}.result_greenoa; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_languages AS SELECT * FROM ${stats_db_name}.result_languages; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_licenses AS SELECT * FROM ${stats_db_name}.result_licenses; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_oids AS SELECT * FROM ${stats_db_name}.result_oids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_organization AS SELECT * FROM ${stats_db_name}.result_organization; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_peerreviewed AS SELECT * FROM ${stats_db_name}.result_peerreviewed; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_pids AS SELECT * FROM ${stats_db_name}.result_pids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_projectcount AS SELECT * FROM ${stats_db_name}.result_projectcount; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_projects AS SELECT * FROM ${stats_db_name}.result_projects; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_refereed AS SELECT * FROM ${stats_db_name}.result_refereed; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_sources AS SELECT * FROM ${stats_db_name}.result_sources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.result_topics AS SELECT * FROM ${stats_db_name}.result_topics; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.rndexpediture AS SELECT * FROM ${stats_db_name}.rndexpediture; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.roarmap AS SELECT * FROM ${stats_db_name}.roarmap; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software AS SELECT * FROM ${stats_db_name}.software; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_citations AS SELECT * FROM ${stats_db_name}.software_citations; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_classifications AS SELECT * FROM ${stats_db_name}.software_classifications; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_concepts AS SELECT * FROM ${stats_db_name}.software_concepts; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_datasources AS SELECT * FROM ${stats_db_name}.software_datasources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_languages AS SELECT * FROM ${stats_db_name}.software_languages; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_licenses AS SELECT * FROM ${stats_db_name}.software_licenses; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_oids AS SELECT * FROM ${stats_db_name}.software_oids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_pids AS SELECT * FROM ${stats_db_name}.software_pids; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_refereed AS SELECT * FROM ${stats_db_name}.software_refereed; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_sources AS SELECT * FROM ${stats_db_name}.software_sources; +CREATE VIEW IF NOT EXISTS ${stats_db_production_name}.software_topics AS SELECT * FROM ${stats_db_name}.software_topics; diff --git a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml index 324e6f9a1..ae2318238 100644 --- a/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml +++ b/dhp-workflows/dhp-stats-promote/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml @@ -4,10 +4,6 @@ stats_db_name the target stats database name - - stats_db_shadow_name - the name of the shadow schema - stats_db_production_name the name of the production schema @@ -41,262 +37,47 @@ - + Action failed, error message[${wf:errorMessage(wf:lastErrorNode())}] - + ${hive_jdbc_url} - + stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} + stats_db_production_name=${stats_db_production_name} - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - external_stats_db_name=${external_stats_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - external_stats_db_name=${external_stats_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - + - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - openaire_db_name=${openaire_db_name} - - - - - - - - ${hive_jdbc_url} - - stats_db_name=${stats_db_name} - stats_db_shadow_name=${stats_db_shadow_name} - - - - - - + ${jobTracker} ${nameNode} impala-shell.sh - ${stats_db_name} - step18.sql - ${wf:appPath()}/scripts/step18.sql + ${stats_db_production_name} + computeProductionStats.sql + ${wf:appPath()}/scripts/computeProductionStats.sql impala-shell.sh - - - - - - - ${jobTracker} - ${nameNode} - impala-shell.sh - ${stats_db_shadow_name} - step19.sql - ${wf:appPath()}/scripts/step19.sql - impala-shell.sh - - + - + ${jobTracker} ${nameNode} - updateCache.sh + promoteCache.sh ${stats_tool_api_url} - updateCache.sh + promoteCache.sh - - + \ No newline at end of file diff --git a/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml b/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml index 0b6a00df1..451461669 100644 --- a/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml +++ b/dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml @@ -255,7 +255,7 @@ ${hive_jdbc_url} - + stats_db_name=${stats_db_name} stats_db_shadow_name=${stats_db_shadow_name} @@ -283,8 +283,8 @@ ${nameNode} impala-shell.sh ${stats_db_shadow_name} - step19.sql - ${wf:appPath()}/scripts/step19.sql + computeProductionStats.sql + ${wf:appPath()}/scripts/computeProductionStats.sql impala-shell.sh