forked from antonis.lempesis/dnet-hadoop
do not consider NCID, GBIF as PIDs candidate for the ID creation
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2c407e775e
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349e7246aa
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@ -91,17 +91,15 @@ public class IdentifierFactory implements Serializable {
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if (CleaningFunctions.PID_BLACKLIST.contains(StringUtils.trim(s.getValue().toLowerCase()))) {
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if (CleaningFunctions.PID_BLACKLIST.contains(StringUtils.trim(s.getValue().toLowerCase()))) {
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return false;
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return false;
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}
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}
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try {
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switch (PidType.tryValueOf(s.getQualifier().getClassid())) {
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switch (PidType.valueOf(s.getQualifier().getClassid())) {
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case doi:
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case doi:
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final String doi = StringUtils.trim(StringUtils.lowerCase(s.getValue()));
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final String doi = StringUtils.trim(StringUtils.lowerCase(s.getValue()));
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return doi.matches(DOI_REGEX);
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return doi.matches(DOI_REGEX);
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case original:
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return false;
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default:
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default:
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return true;
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return true;
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}
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}
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} catch (IllegalArgumentException e) {
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return false;
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}
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}
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}
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private static <T extends OafEntity> String idFromPid(T entity, StructuredProperty s, boolean md5) {
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private static <T extends OafEntity> String idFromPid(T entity, StructuredProperty s, boolean md5) {
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@ -10,8 +10,8 @@ public class OrganizationPidComparator implements Comparator<StructuredProperty>
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@Override
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@Override
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public int compare(StructuredProperty left, StructuredProperty right) {
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public int compare(StructuredProperty left, StructuredProperty right) {
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PidType lClass = PidType.valueOf(left.getQualifier().getClassid());
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PidType lClass = PidType.tryValueOf(left.getQualifier().getClassid());
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PidType rClass = PidType.valueOf(right.getQualifier().getClassid());
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PidType rClass = PidType.tryValueOf(right.getQualifier().getClassid());
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if (lClass.equals(PidType.GRID))
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if (lClass.equals(PidType.GRID))
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return -1;
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return -1;
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@ -6,7 +6,7 @@ import org.apache.commons.lang3.EnumUtils;
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public enum PidType {
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public enum PidType {
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// Result
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// Result
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doi, pmid, pmc, handle, arXiv, NCID, GBIF, nct, pdb,
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doi, pmid, pmc, handle, arXiv, nct, pdb,
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// Organization
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// Organization
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GRID, mag_id, urn,
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GRID, mag_id, urn,
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@ -10,8 +10,8 @@ public class ResultPidComparator implements Comparator<StructuredProperty> {
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@Override
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@Override
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public int compare(StructuredProperty left, StructuredProperty right) {
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public int compare(StructuredProperty left, StructuredProperty right) {
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PidType lClass = PidType.valueOf(left.getQualifier().getClassid());
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PidType lClass = PidType.tryValueOf(left.getQualifier().getClassid());
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PidType rClass = PidType.valueOf(right.getQualifier().getClassid());
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PidType rClass = PidType.tryValueOf(right.getQualifier().getClassid());
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if (lClass.equals(PidType.doi))
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if (lClass.equals(PidType.doi))
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return -1;
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return -1;
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@ -38,24 +38,14 @@ public class ResultPidComparator implements Comparator<StructuredProperty> {
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if (rClass.equals(PidType.arXiv))
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if (rClass.equals(PidType.arXiv))
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return 1;
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return 1;
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if (lClass.equals(PidType.NCID))
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return -1;
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if (rClass.equals(PidType.NCID))
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return 1;
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if (lClass.equals(PidType.GBIF))
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return -1;
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if (rClass.equals(PidType.GBIF))
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return 1;
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if (lClass.equals(PidType.nct))
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if (lClass.equals(PidType.nct))
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return -1;
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return -1;
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if (rClass.equals(PidType.nct))
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if (rClass.equals(PidType.nct))
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return 1;
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return 1;
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if (lClass.equals(PidType.urn))
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if (lClass.equals(PidType.pdb))
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return -1;
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return -1;
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if (rClass.equals(PidType.urn))
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if (rClass.equals(PidType.pdb))
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return 1;
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return 1;
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return 0;
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return 0;
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