adding short description

This commit is contained in:
Miriam Baglioni 2020-10-05 13:54:39 +02:00
parent 0c12d7bdd8
commit 061527f06e
5 changed files with 109 additions and 25 deletions

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@ -23,6 +23,74 @@ import eu.dnetlib.dhp.application.ArgumentApplicationParser;
import eu.dnetlib.dhp.common.HdfsSupport;
import scala.Tuple2;
/**
* Among all the programmes provided in the csv file, selects those in H2020 framework that have an english title.
*
* The title is then handled to get the programme description at a certain level. The set of programme titles will then
* be used to associate a classification for the programme.
*
* The programme code describes an hierarchy that can be exploited to provide the classification. To determine the hierarchy
* the code can be split by '.'. If the length of the splitted code is less than or equal to 2 it can be directly used
* as the classification: H2020-EU -> Horizon 2020 Framework Programme (It will never be repeated),
* H2020-EU.1. -> Excellent science, H2020-EU.2. -> Industrial leadership etc.
*
* The codes are ordered and for all of them the concatenation of all the titles (from the element in position 1 of
* the splitted code) handled as below is used to create the classification. For example:
*
* H2020-EU.1.1 -> Excellent science | European Research Council (ERC)
* from H2020-EU.1. -> Excellence science and H2020-EU.1.1. -> European Research Council (ERC)
*
* H2020-EU.3.1.3.1. -> Societal challenges | Health, demographic change and well-being | Treating and managing disease | Treating disease, including developing regenerative medicine
* from H2020-EU.3. -> Societal challenges,
* H2020-EU.3.1. -> Health, demographic change and well-being
* H2020-EU.3.1.3 -> Treating and managing disease
* H2020-EU.3.1.3.1. -> Treating disease, including developing regenerative medicine
*
* The classification up to level three, will be split in dedicated variables, while the complete classification will be stored
* in a variable called classification and provided as shown above.
*
* The programme title is not give in a standardized way:
*
* - Sometimes associated to the higher level in the hierarchy we can find Priority in title other times it is not the
* case. Since it is not uniform, we removed priority from the handled titles:
*
* H2020-EU.1. -> PRIORITY 'Excellent science'
* H2020-EU.2. -> PRIORITY 'Industrial leadership'
* H2020-EU.3. -> PRIORITY 'Societal challenges
*
* will become
*
* H2020-EU.1. -> Excellent science
* H2020-EU.2. -> Industrial leadership
* H2020-EU.3. -> Societal challenges
*
* - Sometimes the title of the parent is repeated in the title for the code, but it is not always the case, so, titles
* associated to previous levels in the hierarchy are removed from the code title.
*
* H2020-EU.1.2. -> EXCELLENT SCIENCE - Future and Emerging Technologies (FET)
* H2020-EU.2.2. -> INDUSTRIAL LEADERSHIP - Access to risk finance
* H2020-EU.3.4. -> SOCIETAL CHALLENGES - Smart, Green And Integrated Transport
*
* will become
*
* H2020-EU.1.2. -> Future and Emerging Technologies (FET)
* H2020-EU.2.2. -> Access to risk finance
* H2020-EU.3.4. -> Smart, Green And Integrated Transport
*
* This holds at all levels in the hierarchy. Hence
*
* H2020-EU.2.1.2. -> INDUSTRIAL LEADERSHIP - Leadership in enabling and industrial technologies Nanotechnologies
*
* will become
*
* H2020-EU.2.1.2. -> Nanotechnologies
*
* - Euratom is not given in the way the other programmes are: H2020-EU. but H2020-Euratom- . So we need to write
* specific code for it
*
*
*
*/
public class PrepareProgramme {
private static final Logger log = LoggerFactory.getLogger(PrepareProgramme.class);
@ -107,6 +175,17 @@ public class PrepareProgramme {
return csvProgramme;
});
prepareClassification(h2020Programmes);
h2020Programmes.map(csvProgramme -> OBJECT_MAPPER.writeValueAsString(csvProgramme))
.saveAsTextFile(outputPath);
}
private static void prepareClassification(JavaRDD<CSVProgramme> h2020Programmes) {
Object[] codedescription = h2020Programmes
.map(value -> new Tuple2<>(value.getCode(), value.getTitle()))
.collect()
@ -174,16 +253,13 @@ public class PrepareProgramme {
}
}
h2020Programmes.map(csvProgramme -> {
h2020Programmes.foreach(csvProgramme -> {
if (!csvProgramme.getCode().endsWith(".") && !csvProgramme.getCode().contains("Euratom")
&& !csvProgramme.getCode().equals("H2020-EC"))
&& !csvProgramme.getCode().equals("H2020-EC"))
csvProgramme.setClassification(map.get(csvProgramme.getCode() + "."));
else
csvProgramme.setClassification(map.get(csvProgramme.getCode()));
return OBJECT_MAPPER.writeValueAsString(csvProgramme);
}).saveAsTextFile(outputPath);
});
}
public static <R> Dataset<R> readPath(

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@ -24,6 +24,10 @@ import eu.dnetlib.dhp.application.ArgumentApplicationParser;
import eu.dnetlib.dhp.common.HdfsSupport;
import scala.Tuple2;
/**
* Selects only the relevant information collected with the projects: project grant agreement, project programme code and
* project topic code for the projects that are also collected from OpenAIRE.
*/
public class PrepareProjects {
private static final Logger log = LoggerFactory.getLogger(PrepareProgramme.class);

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@ -3,11 +3,13 @@ package eu.dnetlib.dhp.actionmanager.project;
import java.io.Serializable;
/**
* Class to store the grande agreement (code) of the collected projects
*/
public class ProjectSubset implements Serializable {
private String code;
private String topiccode;
private String topicdescription;
public String getCode() {
return code;
@ -17,19 +19,4 @@ public class ProjectSubset implements Serializable {
this.code = code;
}
public String getTopiccode() {
return topiccode;
}
public void setTopiccode(String topiccode) {
this.topiccode = topiccode;
}
public String getTopicdescription() {
return topicdescription;
}
public void setTopicdescription(String topicdescription) {
this.topicdescription = topicdescription;
}
}

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@ -25,6 +25,10 @@ import com.fasterxml.jackson.databind.ObjectMapper;
import eu.dnetlib.dhp.application.ArgumentApplicationParser;
import eu.dnetlib.dhp.common.DbClient;
/**
* queries the OpenAIRE database to get the grant agreement of projects collected from corda__h2020. The code collected
* are written on hdfs using the ProjectSubset model
*/
public class ReadProjectsFromDB implements Closeable {
private final DbClient dbClient;
@ -72,8 +76,6 @@ public class ReadProjectsFromDB implements Closeable {
try {
ProjectSubset p = new ProjectSubset();
p.setCode(rs.getString("code"));
// p.setTopiccode(rs.getString("optional1"));
// p.setTopicdescription(rs.getString("optional2"));
return Arrays.asList(p);
} catch (final Exception e) {

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@ -36,6 +36,21 @@ import eu.dnetlib.dhp.schema.oaf.Project;
import eu.dnetlib.dhp.utils.DHPUtils;
import scala.Tuple2;
/**
* Class that makes the ActionSet. To prepare the AS two joins are needed
*
* 1. join betweem the collected project subset and the programme extenden with the classification on the grant agreement.
* For each entry a
* eu.dnetlib.dhp.Project entity is created and the information about H2020Classification is set together with the
* h2020topiccode variable
* 2. join between the output of the previous step and the topic information on the topic code. Each time a match is
* found the h2020topicdescription variable is set.
*
* To produce one single entry for each project code a step of groupoing is needed: each project can be associated to more
* than one programme.
*
*
*/
public class SparkAtomicActionJob {
private static final Logger log = LoggerFactory.getLogger(SparkAtomicActionJob.class);
private static final ObjectMapper OBJECT_MAPPER = new ObjectMapper();