134 lines
10 KiB
XML
134 lines
10 KiB
XML
<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100010788</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">NCBI dbGaP</r3d:repositoryName>
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<r3d:additionalName language="eng">DataBase of Genotypes And Phenotypes</r3d:additionalName>
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<r3d:additionalName language="eng">genotypes and phenotypes</r3d:additionalName>
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<r3d:repositoryURL>https://www.ncbi.nlm.nih.gov/gap/</r3d:repositoryURL>
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<r3d:repositoryIdentifier>OMICS_00263</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:SCR_002709</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:nif-0000-23342</r3d:repositoryIdentifier>
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<r3d:description language="eng">The NCBI database of Genotypes and Phenotypes archives and distributes the results of studies that have investigated the interaction of genotype and phenotype, including genome-wide association studies, medical sequencing, molecular diagnostic assays, and association between genotype and non-clinical traits. The database provides summaries of studies, the contents of measured variables, and original study document text. dbGaP provides two types of access for users, open and controlled. Through the controlled access, users may access individual-level data such as phenotypic data tables and genotypes.</r3d:description>
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<r3d:repositoryContact>https://dbgap.ncbi.nlm.nih.gov/aa/wga.cgi?page=email&from=login</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:type>institutional</r3d:type>
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<r3d:size updated=""></r3d:size>
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<r3d:startDate>2008</r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
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<r3d:subject subjectScheme="DFG">20105 General Genetics</r3d:subject>
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<r3d:subject subjectScheme="DFG">205 Medicine</r3d:subject>
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<r3d:subject subjectScheme="DFG">20503 Human Genetics</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
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<r3d:missionStatementURL></r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Plain text</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:keyword>cells - morphology</r3d:keyword>
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<r3d:keyword>genetic recombination</r3d:keyword>
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<r3d:keyword>genotype-environment interaction</r3d:keyword>
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<r3d:keyword>homology (Biology)</r3d:keyword>
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<r3d:keyword>molecular diagnosis</r3d:keyword>
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<r3d:keyword>morphology</r3d:keyword>
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<r3d:keyword>phenotype</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">National Center for Biotechnology Information</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">NCBI</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>http://www.ncbi.nlm.nih.gov/</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">National Institutes of Health</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">NIH</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>http://www.nih.gov/</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">U.S. Department of Health & Human Services</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">HHS</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>http://www.hhs.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>RRID:SCR_009983</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:nlx_inv_1005043</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">United States National Library of Medicine</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">NLM</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>http://www.nlm.nih.gov/</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>Certificate of Confidentiality</r3d:policyName>
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<r3d:policyURL>http://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/GetPdf.cgi?document_name=ConfidentialityCertificate.pdf</r3d:policyURL>
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</r3d:policy>
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<r3d:policy>
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<r3d:policyName>Policy for Genome-Wide Association Studies - GWAS</r3d:policyName>
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<r3d:policyURL>http://grants.nih.gov/grants/guide/notice-files/NOT-OD-07-088.html#policy</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>embargoed</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>restricted</r3d:dataAccessType>
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<r3d:dataAccessRestriction>other</r3d:dataAccessRestriction>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>Public Domain</r3d:dataLicenseName>
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<r3d:dataLicenseURL>http://www.ncbi.nlm.nih.gov/About/disclaimer.html</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataLicense>
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<r3d:dataLicenseName>other</r3d:dataLicenseName>
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<r3d:dataLicenseURL>http://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/about.html#duc</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataLicense>
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<r3d:dataLicenseName>other</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://www.copyright.gov/fls/fl102.html</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>open</r3d:dataUploadType>
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</r3d:dataUpload>
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<r3d:dataUploadLicense>
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<r3d:dataUploadLicenseName>Steps for dbGaP
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Study Registration, Submission, and release of Data</r3d:dataUploadLicenseName>
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<r3d:dataUploadLicenseURL>http://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/GetPdf.cgi?document_name=HowToSubmit.pdf</r3d:dataUploadLicenseURL>
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</r3d:dataUploadLicense>
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<r3d:versioning>yes</r3d:versioning>
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<r3d:api apiType="FTP">ftp://ftp.ncbi.nlm.nih.gov/dbgap/</r3d:api>
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<r3d:pidSystem>none</r3d:pidSystem>
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<r3d:citationGuidelineURL></r3d:citationGuidelineURL>
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<r3d:enhancedPublication>yes</r3d:enhancedPublication>
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<r3d:qualityManagement>yes</r3d:qualityManagement>
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<r3d:syndication syndicationType="RSS">http://www.ncbi.nlm.nih.gov/feed/rss.cgi?ChanKey=dbGaPnews</r3d:syndication>
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<r3d:remarks>NCBI dbGaP is covered by Thomson Reuters Data Citation Index.</r3d:remarks>
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<r3d:entryDate>2014-05-12</r3d:entryDate>
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<r3d:lastUpdate>2021-10-06</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data> |