121 lines
9.4 KiB
XML
121 lines
9.4 KiB
XML
<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100010692</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">ProteomeXchange</r3d:repositoryName>
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<r3d:additionalName language="eng">PX</r3d:additionalName>
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<r3d:repositoryURL>http://www.proteomexchange.org/</r3d:repositoryURL>
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<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.92dt9d</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>MIR:00000513</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>OMICS_02458</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:SCR_004055</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:nlx_158620</r3d:repositoryIdentifier>
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<r3d:description language="eng">The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.
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Current members accepting submissions are:
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The PRIDE PRoteomics IDEntifications database at the European Bioinformatics Institute focusing mainly on shotgun mass spectrometry proteomics data
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PeptideAtlas/PASSEL focusing on SRM/MRM datasets.</r3d:description>
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<r3d:repositoryContact>http://www.proteomexchange.org/contact/index.html</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:type>institutional</r3d:type>
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<r3d:size updated=""></r3d:size>
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<r3d:startDate>2011-01-01</r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
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<r3d:subject subjectScheme="DFG">20101 Biochemistry</r3d:subject>
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<r3d:subject subjectScheme="DFG">20107 Bioinformatics and Theoretical Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">3 Natural Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">304 Analytical Chemistry, Method Development (Chemistry)</r3d:subject>
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<r3d:subject subjectScheme="DFG">308 Optics, Quantum Optics and Physics of Atoms, Molecules and Plasmas</r3d:subject>
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<r3d:subject subjectScheme="DFG">31 Chemistry</r3d:subject>
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<r3d:subject subjectScheme="DFG">32 Physics</r3d:subject>
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<r3d:missionStatementURL>http://www.proteomexchange.org/</r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Images</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Plain text</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Standard office documents</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured text</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">other</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:providerType>serviceProvider</r3d:providerType>
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<r3d:keyword>MS proteomics data</r3d:keyword>
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<r3d:keyword>mass spectrometry</r3d:keyword>
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<r3d:keyword>protein / peptide identifications</r3d:keyword>
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<r3d:keyword>protein identification</r3d:keyword>
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<r3d:keyword>proteomics</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">EMBL-EBI</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">European Molecular Biology Laboratory, The European Bioinformatics Institute</r3d:institutionAdditionalName>
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<r3d:institutionCountry>EEC</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.ebi.ac.uk/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:02catss52</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>https://www.ebi.ac.uk/about/contact</r3d:institutionContact>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">European Commission, Community Research and Development Information Service, Seventh Framework Programme</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">CORDIS FP7</r3d:institutionAdditionalName>
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<r3d:institutionCountry>EEC</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://wayback.archive-it.org/12090/*/cordis.europa.eu/fp7</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">ProteomeXchange Consortium</r3d:institutionName>
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<r3d:institutionCountry>AAA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>http://www.proteomexchange.org/</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>Terms of use</r3d:policyName>
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<r3d:policyURL>https://www.ebi.ac.uk/about/terms-of-use</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>restricted</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>CC</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://creativecommons.org/licenses/by/2.5/</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataLicense>
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<r3d:dataLicenseName>other</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://www.apache.org/licenses/LICENSE-2.0</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>restricted</r3d:dataUploadType>
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<r3d:dataUploadRestriction>registration</r3d:dataUploadRestriction>
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</r3d:dataUpload>
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<r3d:software>
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<r3d:softwareName>unknown</r3d:softwareName>
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</r3d:software>
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<r3d:versioning></r3d:versioning>
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<r3d:api apiType="FTP">ftp://ftp.pride.ebi.ac.uk/</r3d:api>
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<r3d:citationGuidelineURL></r3d:citationGuidelineURL>
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<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
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<r3d:qualityManagement>yes</r3d:qualityManagement>
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<r3d:remarks>is covered by Elsevier. Tutorial for submissions: http://www.proteomexchange.org/docs/guidelines_px.pdf
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Project organization/partners: http://www.proteomexchange.org/project-organization</r3d:remarks>
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<r3d:entryDate>2013-07-23</r3d:entryDate>
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<r3d:lastUpdate>2022-01-05</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data> |