107 lines
8.7 KiB
XML
107 lines
8.7 KiB
XML
<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100010185</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">The Arabidopsis Information Resource</r3d:repositoryName>
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<r3d:additionalName language="eng">TAIR</r3d:additionalName>
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<r3d:repositoryURL>https://www.arabidopsis.org/</r3d:repositoryURL>
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<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.4dqw0</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>OMICS_01662</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:SCR_004618</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:nlx_61477</r3d:repositoryIdentifier>
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<r3d:description language="eng">The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana . Data available from TAIR includes the complete genome sequence along with gene structure, gene product information, metabolism, gene expression, DNA and seed stocks, genome maps, genetic and physical markers, publications, and information about the Arabidopsis research community. Gene product function data is updated every two weeks from the latest published research literature and community data submissions. Gene structures are updated 1-2 times per year using computational and manual methods as well as community submissions of new and updated genes. TAIR also provides extensive linkouts from our data pages to other Arabidopsis resources.</r3d:description>
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<r3d:repositoryContact>curator@arabidopsis.org</r3d:repositoryContact>
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<r3d:repositoryContact>https://www.arabidopsis.org/contact/index.jsp</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:size updated=""></r3d:size>
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<r3d:startDate>1999</r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
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<r3d:subject subjectScheme="DFG">202 Plant Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">20207 Plant Genetics</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:missionStatementURL>https://www.arabidopsis.org/about/index.jsp</r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Images</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Plain text</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Software applications</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Standard office documents</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:providerType>serviceProvider</r3d:providerType>
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<r3d:keyword>bioinformatics</r3d:keyword>
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<r3d:keyword>clones</r3d:keyword>
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<r3d:keyword>data mining proteins</r3d:keyword>
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<r3d:keyword>gene expression</r3d:keyword>
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<r3d:keyword>genetic map</r3d:keyword>
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<r3d:keyword>genetic markers</r3d:keyword>
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<r3d:keyword>genome sequence</r3d:keyword>
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<r3d:keyword>genomics</r3d:keyword>
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<r3d:keyword>germ plasm</r3d:keyword>
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<r3d:keyword>ontology</r3d:keyword>
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<r3d:keyword>physical map</r3d:keyword>
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<r3d:keyword>taxonomy</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">Phoenix Bioinformatics</r3d:institutionName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>http://www.phoenixbioinformatics.org/</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>TAIR Users Guide</r3d:policyName>
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<r3d:policyURL>https://www.arabidopsis.org/download_files/Help_Documents/CPBI_Unit_1.11_2017_submitted.pdf</r3d:policyURL>
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</r3d:policy>
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<r3d:policy>
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<r3d:policyName>TAIR terms of use</r3d:policyName>
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<r3d:policyURL>https://www.arabidopsis.org/doc/about/tair_terms_of_use/417</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:databaseLicense>
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<r3d:databaseLicenseName>other</r3d:databaseLicenseName>
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<r3d:databaseLicenseURL>https://www.gnu.org/licenses/lgpl.html</r3d:databaseLicenseURL>
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</r3d:databaseLicense>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>restricted</r3d:dataAccessType>
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<r3d:dataAccessRestriction>feeRequired</r3d:dataAccessRestriction>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>CC</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://creativecommons.org/licenses/by/4.0/</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataLicense>
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<r3d:dataLicenseName>other</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://www.arabidopsis.org/doc/about/tair_licensing/416</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>restricted</r3d:dataUploadType>
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<r3d:dataUploadRestriction>other</r3d:dataUploadRestriction>
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</r3d:dataUpload>
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<r3d:software>
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<r3d:softwareName>unknown</r3d:softwareName>
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</r3d:software>
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<r3d:versioning>yes</r3d:versioning>
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<r3d:api apiType="FTP">ftp://ftp.arabidopsis.org/home/tair/</r3d:api>
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<r3d:pidSystem>none</r3d:pidSystem>
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<r3d:citationGuidelineURL>https://www.arabidopsis.org/about/citingtair.jsp</r3d:citationGuidelineURL>
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<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
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<r3d:qualityManagement>yes</r3d:qualityManagement>
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<r3d:syndication syndicationType="RSS">https://www.arabidopsis.org/news/rss.xml</r3d:syndication>
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<r3d:remarks>is covered by Elsevier.
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TAIR collaborates with the Arabidopsis Biological Resource Center (ABRC). The Arabidopsis Biological Resource Center at The Ohio State University collects, reproduces, preserves and distributes seed and DNA resources of Arabidopsis thaliana and related species. Stock information and ordering for the ABRC are fully integrated into TAIR. The ABRC's mission is to aquire, preserve and distribute seed and DNA resources that are useful to the Arabidopsis research community.</r3d:remarks>
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<r3d:entryDate>2013-01-11</r3d:entryDate>
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<r3d:lastUpdate>2021-09-28</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data> |