91 lines
6.6 KiB
XML
91 lines
6.6 KiB
XML
<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100010091</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">JASPAR</r3d:repositoryName>
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<r3d:repositoryURL>http://jaspar.genereg.net/</r3d:repositoryURL>
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<r3d:repositoryIdentifier>RRID:OMICS_00538</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:SCR_003030</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:nif-0000-03061</r3d:repositoryIdentifier>
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<r3d:description language="eng">JASPAR is the leading open-access database of matrix profiles describing the DNA-binding patterns of transcription factors and other proteins interacting with DNA in a sequence-specific manner.</r3d:description>
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<r3d:repositoryContact>http://jaspar.genereg.net/contact-us</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:size updated="2019-05-15">2.404 profiles; 1.564 Jaspar CORE profiles</r3d:size>
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<r3d:startDate>2004</r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>dan</r3d:repositoryLanguage>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:missionStatementURL>http://jaspar.genereg.net/about/</r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Archived data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Plain text</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:keyword>DNA</r3d:keyword>
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<r3d:keyword>bioinformatics</r3d:keyword>
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<r3d:keyword>funghi</r3d:keyword>
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<r3d:keyword>insect</r3d:keyword>
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<r3d:keyword>matrix models</r3d:keyword>
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<r3d:keyword>nematoda</r3d:keyword>
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<r3d:keyword>pattern</r3d:keyword>
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<r3d:keyword>plant</r3d:keyword>
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<r3d:keyword>protein</r3d:keyword>
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<r3d:keyword>structures</r3d:keyword>
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<r3d:keyword>vertebrata</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">University of Copenhagen, Department of Biology, The Bioinformatics Centre</r3d:institutionName>
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<r3d:institutionAdditionalName language="dan">Kobenhavns Universitet, Biologisk Institut, Bioinformatik-centret</r3d:institutionAdditionalName>
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<r3d:institutionCountry>DNK</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.binf.ku.dk/</r3d:institutionURL>
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<r3d:responsibilityStartDate>2004</r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>info@binf.ku.dk</r3d:institutionContact>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>Documentation</r3d:policyName>
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<r3d:policyURL>http://jaspar.binf.ku.dk/html/TEMPLATES/help.html</r3d:policyURL>
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</r3d:policy>
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<r3d:policy>
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<r3d:policyName>JASPAR data submission</r3d:policyName>
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<r3d:policyURL>http://jaspar.binf.ku.dk/html/TEMPLATES/submission.html</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>other</r3d:dataLicenseName>
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<r3d:dataLicenseURL>http://jaspar.binf.ku.dk/html/TEMPLATES/help.html</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>restricted</r3d:dataUploadType>
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<r3d:dataUploadRestriction>other</r3d:dataUploadRestriction>
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</r3d:dataUpload>
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<r3d:dataUploadLicense>
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<r3d:dataUploadLicenseName>JASPAR Data Submission</r3d:dataUploadLicenseName>
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<r3d:dataUploadLicenseURL>http://jaspar.binf.ku.dk/html/TEMPLATES/submission.html</r3d:dataUploadLicenseURL>
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</r3d:dataUploadLicense>
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<r3d:software>
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<r3d:softwareName>unknown</r3d:softwareName>
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</r3d:software>
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<r3d:versioning>yes</r3d:versioning>
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<r3d:api apiType="REST">http://jaspar.genereg.net/api/</r3d:api>
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<r3d:pidSystem>none</r3d:pidSystem>
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<r3d:citationGuidelineURL>http://jaspar.genereg.net/faq/</r3d:citationGuidelineURL>
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<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
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<r3d:qualityManagement>yes</r3d:qualityManagement>
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<r3d:remarks>Authority: Albin Sandelin (University of Copenhagen); Boris Lenhard (University of Bergen)</r3d:remarks>
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<r3d:entryDate>2012-10-08</r3d:entryDate>
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<r3d:lastUpdate>2019-05-15</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data> |