165 lines
14 KiB
XML
165 lines
14 KiB
XML
<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100013542</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">National Microbiome Data Collaborative</r3d:repositoryName>
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<r3d:additionalName language="eng">NMDC</r3d:additionalName>
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<r3d:repositoryURL>https://microbiomedata.org/</r3d:repositoryURL>
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<r3d:repositoryIdentifier>biodbcore-001563</r3d:repositoryIdentifier>
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<r3d:description language="eng">The long-term vision of the NMDC is to support microbiome data exploration through a sustainable data discovery platform that promotes open science and shared-ownership across a broad and diverse community of researchers, funders, publishers, and societies. The NMDC is developing a distributed data infrastructure while engaging with the research community to enable multidisciplinary and FAIR microbiome data.</r3d:description>
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<r3d:repositoryContact>https://microbiomedata.org/contact/</r3d:repositoryContact>
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<r3d:repositoryContact>support@microbiomedata.org</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:size updated=""></r3d:size>
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<r3d:startDate></r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">204 Microbiology, Virology and Immunology</r3d:subject>
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<r3d:subject subjectScheme="DFG">20402 Microbial Ecology and Applied Microbiology</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
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<r3d:missionStatementURL>https://microbiomedata.org/about/</r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Source code</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured text</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:providerType>serviceProvider</r3d:providerType>
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<r3d:keyword>FAIR</r3d:keyword>
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<r3d:keyword>data analysis</r3d:keyword>
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<r3d:keyword>data discovery</r3d:keyword>
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<r3d:keyword>microbe</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">Lawrence Berkeley National Laboratory</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">Berkeley Lab</r3d:institutionAdditionalName>
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<r3d:institutionAdditionalName language="eng">LBL</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.lbl.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:02jbv0t02</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:SCR_011336</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:nlx_37075</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate>July 2019</r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate>TBD (currently Sept 2022)</r3d:responsibilityEndDate>
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<r3d:institutionContact>help@lbl.gov</r3d:institutionContact>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">Los Alamos National Laboratory</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">LANL</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.lanl.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:01e41cf67</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:SCR_011349</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:nlx_71073</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>https://www.lanl.gov/resources/contacts.php</r3d:institutionContact>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">National Science Foundation</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">NSF</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.nsf.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:021nxhr62</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:SCR_012938</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:nlx_inv_1005118</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">Oak Ridge National Laboratory</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">ORNL</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.ornl.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:01qz5mb56</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:SCR_011475</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:nlx_149160</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>https://www.ornl.gov/project/contact-us</r3d:institutionContact>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">Pacific Northwest National Laboratory</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">PNNL</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.pnnl.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:05h992307</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:SCR_012842</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:nlx_152675</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>https://www.pnnl.gov/contacts</r3d:institutionContact>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">United States Department of Agriculture</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">USDA</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.usda.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:01na82s61</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:SCR_011486</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>https://ask.usda.gov/s/contactsupport</r3d:institutionContact>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">United States Department of Energy</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">DOE</r3d:institutionAdditionalName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.energy.gov/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:01bj3aw27</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:SCR_012841</r3d:institutionIdentifier>
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<r3d:institutionIdentifier>RRID:nlx_86742</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>Data Use Policy</r3d:policyName>
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<r3d:policyURL>https://microbiomedata.org/nmdc-data-use-policy/</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:databaseLicense>
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<r3d:databaseLicenseName>CC</r3d:databaseLicenseName>
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<r3d:databaseLicenseURL>https://microbiomedata.org/nmdc-data-use-policy/</r3d:databaseLicenseURL>
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</r3d:databaseLicense>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>CC</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://microbiomedata.org/nmdc-data-use-policy/</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>restricted</r3d:dataUploadType>
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</r3d:dataUpload>
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<r3d:versioning>yes</r3d:versioning>
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<r3d:pidSystem>DOI</r3d:pidSystem>
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<r3d:citationGuidelineURL>https://microbiomedata.org/nmdc-data-use-policy/</r3d:citationGuidelineURL>
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<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
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<r3d:qualityManagement>unknown</r3d:qualityManagement>
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<r3d:metadataStandard>
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<r3d:metadataStandardName metadataStandardScheme="DCC">Repository-Developed Metadata Schemas</r3d:metadataStandardName>
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<r3d:metadataStandardURL>http://www.dcc.ac.uk/resources/metadata-standards/repository-developed-metadata-schemas</r3d:metadataStandardURL>
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</r3d:metadataStandard>
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<r3d:remarks>Metadata standards: Genome Standards Consortium - https://gensc.org/mixs/</r3d:remarks>
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<r3d:entryDate>2021-03-23</r3d:entryDate>
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<r3d:lastUpdate>2021-11-17</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data> |