89 lines
7.3 KiB
XML
89 lines
7.3 KiB
XML
<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100012342</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">Genome Sequence Archive</r3d:repositoryName>
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<r3d:additionalName language="eng">GSA</r3d:additionalName>
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<r3d:repositoryURL>https://ngdc.cncb.ac.cn/gsa/</r3d:repositoryURL>
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<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.tdhkc6</r3d:repositoryIdentifier>
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<r3d:description language="eng">GSA is a data repository specialized for archiving raw sequence reads. It supports data generated from a variety of sequencing platforms ranging from Sanger sequencing machines to single-cell sequencing machines and provides data storing and sharing services free of charge for worldwide scientific communities. In addition to raw sequencing data, GSA also accommodates secondary analyzed files in acceptable formats (like BAM, VCF). Its user-friendly web interfaces simplify data entry and submitted data are roughly organized as two parts, viz., Metadata and File, where the former can be further assorted into BioProject, BioSample, Experiment and Run, and the latter contains raw sequence reads.</r3d:description>
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<r3d:repositoryContact>gsa@big.ac.cn</r3d:repositoryContact>
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<r3d:repositoryContact>https://ngdc.cncb.ac.cn/contact</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:size updated="2022-06-01">582.889 projects; 582.889 samples; 19.320.674 experiments</r3d:size>
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<r3d:startDate>2015-08</r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
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<r3d:subject subjectScheme="DFG">20105 General Genetics</r3d:subject>
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<r3d:subject subjectScheme="DFG">20107 Bioinformatics and Theoretical Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">20108 Anatomy</r3d:subject>
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<r3d:subject subjectScheme="DFG">202 Plant Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">20207 Plant Genetics</r3d:subject>
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<r3d:subject subjectScheme="DFG">203 Zoology</r3d:subject>
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<r3d:subject subjectScheme="DFG">20306 Animal Genetics, Cell and Developmental Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:missionStatementURL>https://ngdc.cncb.ac.cn/mission</r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Archived data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Databases</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:providerType>serviceProvider</r3d:providerType>
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<r3d:keyword>DNA</r3d:keyword>
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<r3d:keyword>RNA</r3d:keyword>
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<r3d:keyword>genes</r3d:keyword>
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<r3d:keyword>genome</r3d:keyword>
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<r3d:keyword>raw sequences</r3d:keyword>
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<r3d:keyword>samples</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">Beijing Institute of Genomics, Chinese Academy of Sciences, China National Center for BioInformation), National Genomics Data Center</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">CAS, BIG, BIGD, NGDC</r3d:institutionAdditionalName>
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<r3d:institutionCountry>CHN</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://ngdc.cncb.ac.cn/</r3d:institutionURL>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>https://ngdc.cncb.ac.cn/contact</r3d:institutionContact>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>Data Usage Policies</r3d:policyName>
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<r3d:policyURL>https://ngdc.cncb.ac.cn/policies</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>ODC</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://ngdc.cncb.ac.cn/policies</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>restricted</r3d:dataUploadType>
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<r3d:dataUploadRestriction>registration</r3d:dataUploadRestriction>
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</r3d:dataUpload>
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<r3d:software>
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<r3d:softwareName>unknown</r3d:softwareName>
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</r3d:software>
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<r3d:versioning></r3d:versioning>
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<r3d:api apiType="FTP">ftp://submit.big.ac.cn</r3d:api>
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<r3d:api apiType="FTP">ftp://download.big.ac.cn/gsa/</r3d:api>
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<r3d:citationGuidelineURL>https://ngdc.cncb.ac.cn/gsa/documents#43</r3d:citationGuidelineURL>
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<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
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<r3d:qualityManagement>yes</r3d:qualityManagement>
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<r3d:metadataStandard>
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<r3d:metadataStandardName metadataStandardScheme="DCC">Repository-Developed Metadata Schemas</r3d:metadataStandardName>
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<r3d:metadataStandardURL>http://www.dcc.ac.uk/resources/metadata-standards/repository-developed-metadata-schemas</r3d:metadataStandardURL>
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</r3d:metadataStandard>
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<r3d:remarks>is covered by Elsevier.</r3d:remarks>
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<r3d:entryDate>2017-04-01</r3d:entryDate>
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<r3d:lastUpdate>2022-06-01</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data> |