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RegistriesOverlap/data/re3dataRecords/r3d100011931.xml

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<?xml version="1.0" encoding="utf-8"?>
<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
<r3d:repository>
<r3d:re3data.orgIdentifier>r3d100011931</r3d:re3data.orgIdentifier>
<r3d:repositoryName language="eng">Virus Pathogen Resource</r3d:repositoryName>
<r3d:additionalName language="eng">ViPR</r3d:additionalName>
<r3d:repositoryURL>https://www.viprbrc.org/brc/home.spg?decorator=vipr</r3d:repositoryURL>
<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.2qx8n8</r3d:repositoryIdentifier>
<r3d:repositoryIdentifier>MIR:00000407</r3d:repositoryIdentifier>
<r3d:repositoryIdentifier>RRID:SCR_012983</r3d:repositoryIdentifier>
<r3d:repositoryIdentifier>RRID:nif-0000-25312</r3d:repositoryIdentifier>
<r3d:description language="eng">&lt;&lt;&lt;!!!&lt;&lt;&lt; This repository is no longer available. &gt;&gt;&gt;!!!&gt;&gt;&gt;
Migration of the data, tools, and services from IRD and ViPR to BV-BRC is complete! We are now in the sunsetting phase of the transition. Starting on October 31, 2022, launching the IRD or ViPR home pages will redirect you to the new BV-BRC home page. The current plan is to completely shut down IRD and ViPR by the end of this calendar year. Although it will still be possible to use those sites until shutdown, we strongly encourage you to start using BV-BRC now.</r3d:description>
<r3d:repositoryContact>https://www.viprbrc.org/brc/problemReport.spg?decorator=vipr</r3d:repositoryContact>
<r3d:type>disciplinary</r3d:type>
<r3d:size updated=""></r3d:size>
<r3d:startDate>2010</r3d:startDate>
<r3d:endDate>2022-12-31</r3d:endDate>
<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
<r3d:subject subjectScheme="DFG">20107 Bioinformatics and Theoretical Biology</r3d:subject>
<r3d:subject subjectScheme="DFG">204 Microbiology, Virology and Immunology</r3d:subject>
<r3d:subject subjectScheme="DFG">20404 Virology</r3d:subject>
<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
<r3d:missionStatementURL>https://www.viprbrc.org/brcDocs/documents/ViPR_BROCHURE.pdf</r3d:missionStatementURL>
<r3d:contentType contentTypeScheme="parse">Images</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">Software applications</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
<r3d:providerType>dataProvider</r3d:providerType>
<r3d:providerType>serviceProvider</r3d:providerType>
<r3d:keyword>BLAST</r3d:keyword>
<r3d:keyword>COVID-19</r3d:keyword>
<r3d:keyword>Dengue</r3d:keyword>
<r3d:keyword>Ebola</r3d:keyword>
<r3d:keyword>Enterovirus D68</r3d:keyword>
<r3d:keyword>Hepatitis C</r3d:keyword>
<r3d:keyword>genes</r3d:keyword>
<r3d:keyword>genomes</r3d:keyword>
<r3d:keyword>host factor data</r3d:keyword>
<r3d:keyword>immune epitopes</r3d:keyword>
<r3d:keyword>influenza</r3d:keyword>
<r3d:keyword>phylogenetic tree</r3d:keyword>
<r3d:keyword>proteins</r3d:keyword>
<r3d:keyword>sequence alignment</r3d:keyword>
<r3d:keyword>sequence variation - SNP</r3d:keyword>
<r3d:keyword>vaccine</r3d:keyword>
<r3d:keyword>virus</r3d:keyword>
<r3d:institution>
<r3d:institutionName language="eng">J. Craig Venter Institute</r3d:institutionName>
<r3d:institutionAdditionalName language="eng">JCVI</r3d:institutionAdditionalName>
<r3d:institutionCountry>USA</r3d:institutionCountry>
<r3d:responsibilityType>general</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://www.jcvi.org//</r3d:institutionURL>
<r3d:institutionIdentifier>ROR:049r1ts75</r3d:institutionIdentifier>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>rscheuermann@jcvi.org</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">National Institutes of Health, National Institute of Allergy and Infectious Diseases</r3d:institutionName>
<r3d:institutionAdditionalName language="eng">NIAID</r3d:institutionAdditionalName>
<r3d:institutionAdditionalName language="eng">NIH</r3d:institutionAdditionalName>
<r3d:institutionCountry>USA</r3d:institutionCountry>
<r3d:responsibilityType>funding</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://www.niaid.nih.gov/</r3d:institutionURL>
<r3d:institutionIdentifier>ROR:043z4tv69</r3d:institutionIdentifier>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>alison.yao@nih.gov</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">National Institutes of Health, National Institute of Allergy and Infectious Diseases, Bioinformatics Resource Centers</r3d:institutionName>
<r3d:institutionAdditionalName language="eng">BRCs</r3d:institutionAdditionalName>
<r3d:institutionCountry>USA</r3d:institutionCountry>
<r3d:responsibilityType>funding</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://www.niaid.nih.gov/research/bioinformatics-resource-centers</r3d:institutionURL>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>alison.yao@nih.gov</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">Northrop Grumman</r3d:institutionName>
<r3d:institutionCountry>USA</r3d:institutionCountry>
<r3d:responsibilityType>general</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://www.northropgrumman.com/</r3d:institutionURL>
<r3d:institutionIdentifier>ROR:05kewds18</r3d:institutionIdentifier>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>https://www.northropgrumman.com/who-we-are/contact-us-northrop-grumman/</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">Vecna Technologies</r3d:institutionName>
<r3d:institutionCountry>USA</r3d:institutionCountry>
<r3d:responsibilityType>general</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://www.vecna.com/</r3d:institutionURL>
<r3d:institutionIdentifier>ROR:031r5nr48</r3d:institutionIdentifier>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>support@vecna.com</r3d:institutionContact>
</r3d:institution>
<r3d:policy>
<r3d:policyName>NIAID Data Management and Sharing Guidelines</r3d:policyName>
<r3d:policyURL>https://www.niaid.nih.gov/research/data-sharing-guidelines</r3d:policyURL>
</r3d:policy>
<r3d:policy>
<r3d:policyName>NIH Data Sharing</r3d:policyName>
<r3d:policyURL>https://sharing.nih.gov/</r3d:policyURL>
</r3d:policy>
<r3d:databaseAccess>
<r3d:databaseAccessType>open</r3d:databaseAccessType>
</r3d:databaseAccess>
<r3d:databaseLicense>
<r3d:databaseLicenseName>other</r3d:databaseLicenseName>
<r3d:databaseLicenseURL>https://opensource.org/licenses/</r3d:databaseLicenseURL>
</r3d:databaseLicense>
<r3d:dataAccess>
<r3d:dataAccessType>open</r3d:dataAccessType>
</r3d:dataAccess>
<r3d:dataLicense>
<r3d:dataLicenseName>other</r3d:dataLicenseName>
<r3d:dataLicenseURL>https://www.niaid.nih.gov/research/data-sharing-guidelines</r3d:dataLicenseURL>
</r3d:dataLicense>
<r3d:dataLicense>
<r3d:dataLicenseName>other</r3d:dataLicenseName>
<r3d:dataLicenseURL>https://www.viprbrc.org/brcDocs/documents/ViPR_BROCHURE.pdf</r3d:dataLicenseURL>
</r3d:dataLicense>
<r3d:dataUpload>
<r3d:dataUploadType>restricted</r3d:dataUploadType>
<r3d:dataUploadRestriction>other</r3d:dataUploadRestriction>
<r3d:dataUploadRestriction>registration</r3d:dataUploadRestriction>
</r3d:dataUpload>
<r3d:software>
<r3d:softwareName>unknown</r3d:softwareName>
</r3d:software>
<r3d:versioning>yes</r3d:versioning>
<r3d:pidSystem>none</r3d:pidSystem>
<r3d:citationGuidelineURL>https://www.viprbrc.org/brc/staticContent.spg?decorator=vipr&amp;type=ViprInfo&amp;subtype=Cite</r3d:citationGuidelineURL>
<r3d:enhancedPublication>yes</r3d:enhancedPublication>
<r3d:qualityManagement>unknown</r3d:qualityManagement>
<r3d:remarks>Description: ViPR, the Virus Pathogen Resource, is a publicly available, NIAID-sponsored one-stop database and analysis resource that supports the research of viral pathogens in the NIAID Category A-C
Priority Pathogen lists and those causing (re)emerging infectious diseases. ViPR integrates data from external sources (GenBank, UniProt, Immune Epitope Database, Protein Data Bank, etc.), direct submissions, and internal curation and analysis pipelines, and provides a suite of bioinformatics analysis and visualization tools to expedite virology research.&quot;
Northrop Grumman is one of four Bioinformatics Resource Centers awarded by NIAID to provide data, tools and services which can be accessed through publicly available sites.</r3d:remarks>
<r3d:entryDate>2016-02-09</r3d:entryDate>
<r3d:lastUpdate>2022-12-19</r3d:lastUpdate>
</r3d:repository>
</r3d:re3data>
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