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RegistriesOverlap/data/re3dataRecords/r3d100011570.xml

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<?xml version="1.0" encoding="utf-8"?>
<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
<r3d:repository>
<r3d:re3data.orgIdentifier>r3d100011570</r3d:re3data.orgIdentifier>
<r3d:repositoryName language="eng">Kyoto Encyclopedia of Genes and Genomes</r3d:repositoryName>
<r3d:additionalName language="eng">KEGG</r3d:additionalName>
<r3d:repositoryURL>http://www.genome.jp/kegg/</r3d:repositoryURL>
<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.327nbg</r3d:repositoryIdentifier>
<r3d:repositoryIdentifier>MIR:00000578</r3d:repositoryIdentifier>
<r3d:repositoryIdentifier>RRID:SCR_001120</r3d:repositoryIdentifier>
<r3d:repositoryIdentifier>RRID:nif-0000-21234</r3d:repositoryIdentifier>
<r3d:repositoryIdentifier>RRID:nlx_31015</r3d:repositoryIdentifier>
<r3d:description language="eng">KEGG is a database resource for understanding high-level functions and utilities of the biological system, such as the cell, the organism and the ecosystem, from molecular-level information, especially large-scale molecular datasets generated by genome sequencing and other high-throughput experimental technologies</r3d:description>
<r3d:repositoryContact>KEGG@kegg.jp</r3d:repositoryContact>
<r3d:repositoryContact>https://www.kegg.jp/feedback/</r3d:repositoryContact>
<r3d:type>disciplinary</r3d:type>
<r3d:size updated=""></r3d:size>
<r3d:startDate>1995</r3d:startDate>
<r3d:endDate></r3d:endDate>
<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
<r3d:subject subjectScheme="DFG">20101 Biochemistry</r3d:subject>
<r3d:subject subjectScheme="DFG">203 Zoology</r3d:subject>
<r3d:subject subjectScheme="DFG">20306 Animal Genetics, Cell and Developmental Biology</r3d:subject>
<r3d:subject subjectScheme="DFG">205 Medicine</r3d:subject>
<r3d:subject subjectScheme="DFG">20503 Human Genetics</r3d:subject>
<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
<r3d:missionStatementURL></r3d:missionStatementURL>
<r3d:contentType contentTypeScheme="parse">Databases</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">Software applications</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">Standard office documents</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">Structured text</r3d:contentType>
<r3d:contentType contentTypeScheme="parse">other</r3d:contentType>
<r3d:providerType>dataProvider</r3d:providerType>
<r3d:keyword>COVID-19</r3d:keyword>
<r3d:keyword>biochemistry</r3d:keyword>
<r3d:keyword>bioinformatics</r3d:keyword>
<r3d:keyword>cells</r3d:keyword>
<r3d:keyword>chemistry</r3d:keyword>
<r3d:keyword>drugs</r3d:keyword>
<r3d:keyword>ecosystem</r3d:keyword>
<r3d:keyword>genetics</r3d:keyword>
<r3d:keyword>genomics</r3d:keyword>
<r3d:keyword>health</r3d:keyword>
<r3d:keyword>molecular interaction networks</r3d:keyword>
<r3d:keyword>organism</r3d:keyword>
<r3d:keyword>systemic functions</r3d:keyword>
<r3d:keyword>systems biology</r3d:keyword>
<r3d:institution>
<r3d:institutionName language="eng">Japan Science and Technology Agency, National Bioscience Database Center</r3d:institutionName>
<r3d:institutionAdditionalName language="eng">NBDC</r3d:institutionAdditionalName>
<r3d:institutionAdditionalName language="eng">National Bioscience Database Center</r3d:institutionAdditionalName>
<r3d:institutionCountry>JPN</r3d:institutionCountry>
<r3d:responsibilityType>funding</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://biosciencedbc.jp/en/</r3d:institutionURL>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>https://biosciencedbc.jp/en/contact-us</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">Kyoto University, Institute for Chemical Research, Bioinformatics Center</r3d:institutionName>
<r3d:institutionAdditionalName language="eng">Bioinformatics Center</r3d:institutionAdditionalName>
<r3d:institutionCountry>JPN</r3d:institutionCountry>
<r3d:responsibilityType>general</r3d:responsibilityType>
<r3d:responsibilityType>technical</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>http://www.bic.kyoto-u.ac.jp/</r3d:institutionURL>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>KEGG@kegg.jp</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">Kyoto University, Kanehisa Laboratories</r3d:institutionName>
<r3d:institutionAdditionalName language="eng">Kanehisa Laboratories</r3d:institutionAdditionalName>
<r3d:institutionCountry>JPN</r3d:institutionCountry>
<r3d:responsibilityType>general</r3d:responsibilityType>
<r3d:responsibilityType>technical</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://www.kanehisa.jp/</r3d:institutionURL>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>KEGG@kegg.jp</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">NPO Bioinformatics Japan</r3d:institutionName>
<r3d:institutionCountry>JPN</r3d:institutionCountry>
<r3d:responsibilityType>funding</r3d:responsibilityType>
<r3d:responsibilityType>general</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>https://www.bioinformatics.jp/en/</r3d:institutionURL>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
<r3d:institutionContact>https://www.bioinformatics.jp/en/contact.html</r3d:institutionContact>
</r3d:institution>
<r3d:institution>
<r3d:institutionName language="eng">University of Tokyo, Institute of Medical Science, Human Genome Center</r3d:institutionName>
<r3d:institutionAdditionalName language="eng">HGC</r3d:institutionAdditionalName>
<r3d:institutionAdditionalName language="eng">Human Genome Center</r3d:institutionAdditionalName>
<r3d:institutionCountry>JPN</r3d:institutionCountry>
<r3d:responsibilityType>general</r3d:responsibilityType>
<r3d:institutionType>non-profit</r3d:institutionType>
<r3d:institutionURL>http://hgc.jp/english/</r3d:institutionURL>
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
</r3d:institution>
<r3d:databaseAccess>
<r3d:databaseAccessType>open</r3d:databaseAccessType>
</r3d:databaseAccess>
<r3d:databaseLicense>
<r3d:databaseLicenseName>other</r3d:databaseLicenseName>
<r3d:databaseLicenseURL>https://www.kegg.jp/kegg/docs/plea.html</r3d:databaseLicenseURL>
</r3d:databaseLicense>
<r3d:dataAccess>
<r3d:dataAccessType>open</r3d:dataAccessType>
</r3d:dataAccess>
<r3d:dataAccess>
<r3d:dataAccessType>restricted</r3d:dataAccessType>
<r3d:dataAccessRestriction>feeRequired</r3d:dataAccessRestriction>
</r3d:dataAccess>
<r3d:dataLicense>
<r3d:dataLicenseName>Copyrights</r3d:dataLicenseName>
<r3d:dataLicenseURL>https://www.kegg.jp/kegg/legal.html</r3d:dataLicenseURL>
</r3d:dataLicense>
<r3d:dataUpload>
<r3d:dataUploadType>closed</r3d:dataUploadType>
</r3d:dataUpload>
<r3d:software>
<r3d:softwareName>unknown</r3d:softwareName>
</r3d:software>
<r3d:versioning>yes</r3d:versioning>
<r3d:api apiType="FTP">https://www.bioinformatics.jp/en/keggftp.html</r3d:api>
<r3d:api apiType="REST">https://www.kegg.jp/kegg/rest/</r3d:api>
<r3d:pidSystem>none</r3d:pidSystem>
<r3d:citationGuidelineURL></r3d:citationGuidelineURL>
<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
<r3d:qualityManagement>yes</r3d:qualityManagement>
<r3d:metadataStandard>
<r3d:metadataStandardName metadataStandardScheme="DCC">Repository-Developed Metadata Schemas</r3d:metadataStandardName>
<r3d:metadataStandardURL>http://www.dcc.ac.uk/resources/metadata-standards/repository-developed-metadata-schemas</r3d:metadataStandardURL>
</r3d:metadataStandard>
<r3d:remarks>Academic users may freely use the KEGG website at http://www.kegg.jp/ or its mirror site at GenomeNet http://www.genome.jp/kegg/. Academic users may also freely link to the KEGG website. Non-academic users may use the KEGG website as end users for non-commercial purposes, but any other use requires a license agreement. Non-academic users and Academic users intending to use KEGG for commercial purposes are requested to obtain a license agreement through KEGG&#039;s exclusive licensing agent, Pathway Solutions, for installation of KEGG at their sites, for distribution or reselling of KEGG data, for software development or any other commercial activities that make use of KEGG, or as end users of any third-party application that requires downloading of KEGG data or access to KEGG data via the KEGG API.
Our major source of funding has come from the Institute for Bioinformatics Research and Development (BIRD) of the Japan Science and Technology Agency (JST). As of April 1, 2011 BIRD has been converted to the National Bioscience Database Center (NBDC) in JST.
NPO Bioinformatics Japan operates the KEGG FTP site for academic users. KEGG FTP academic subscription (paid subscription) is available to academic users belonging to academic institutions. First, register for a KEGG FTP account from the URL below:
https://www.bioinformatics.jp/
and activate your account by following the link given in the confirmation email that you receive. Second, login to your account and submit a subscription request, which gives you a link to download your order form. You will have to agree with the terms and conditions of use to complete this step. Third, fill in the order form and send it back by email.
Subscription orders outside of Japan are handled by Pathway Solutions Inc.1
email: academic @ pathway.jp
Subscription orders within Japan are handled by NPO Bioinformatics Japan
email: academic @ bioinformatics.jp
Once your payment is confirmed, you will have an access to the KEGG FTP site.</r3d:remarks>
<r3d:entryDate>2015-03-01</r3d:entryDate>
<r3d:lastUpdate>2021-08-25</r3d:lastUpdate>
</r3d:repository>
</r3d:re3data>
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