95 lines
8.4 KiB
XML
95 lines
8.4 KiB
XML
<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100011253</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">AspGD</r3d:repositoryName>
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<r3d:additionalName language="eng">Aspergillus Genome Database</r3d:additionalName>
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<r3d:repositoryURL>http://www.aspergillusgenome.org/</r3d:repositoryURL>
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<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.9k7at4</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:SCR_001880</r3d:repositoryIdentifier>
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<r3d:repositoryIdentifier>RRID:nif-0000-02577</r3d:repositoryIdentifier>
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<r3d:description language="eng">>>>>!!!!<<<< AspGD data are being integrated into FungiDB. Please click here for additional details http://fungidb.org/ . Discussion of how to maximize the value of FungiDB for the Aspergillus research community will be a major topic at the upcoming AsperFest12 meeting at Asilomar (March 16-17, 2015). >>>>!!!!<<<< AspGD is an organized collection of genetic and molecular biological information about the filamentous fungi of the genus Aspergillus. Among its many species, the genus contains an excellent model organism (A. nidulans, or its teleomorph Emericella nidulans), an important pathogen of the immunocompromised (A. fumigatus), an agriculturally important toxin producer (A. flavus), and two species used in industrial processes (A. niger and A. oryzae). AspGD contains information about genes and proteins of multiple Aspergillus species; descriptions and classifications of their biological roles, molecular functions, and subcellular localizations; gene, protein, and chromosome sequence information; tools for analysis and comparison of sequences; and links to literature information; as well as a multispecies comparative genomics browser tool (Sybil) for exploration of orthology and synteny across multiple sequenced Aspergillus species.</r3d:description>
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<r3d:repositoryContact>aspergillus-curator@lists.stanford.edu</r3d:repositoryContact>
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<r3d:repositoryContact>http://www.aspergillusgenome.org/cgi-bin/suggestion</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:size updated=""></r3d:size>
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<r3d:startDate>2008</r3d:startDate>
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<r3d:endDate>2015</r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
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<r3d:subject subjectScheme="DFG">20105 General Genetics</r3d:subject>
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<r3d:subject subjectScheme="DFG">204 Microbiology, Virology and Immunology</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
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<r3d:missionStatementURL>http://www.aspergillusgenome.org/AboutContents.shtml</r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Audiovisual data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Images</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:keyword>RNA sequence</r3d:keyword>
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<r3d:keyword>fungi</r3d:keyword>
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<r3d:keyword>gene ontology</r3d:keyword>
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<r3d:keyword>life sciences</r3d:keyword>
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<r3d:keyword>molecular biology</r3d:keyword>
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<r3d:keyword>pathogene</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="eng">Broad Institute</r3d:institutionName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.broadinstitute.org/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:05a0ya142</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>jwortman@broadinstitute.org</r3d:institutionContact>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">Stanford University</r3d:institutionName>
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<r3d:institutionCountry>USA</r3d:institutionCountry>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.stanford.edu/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:00f54p054</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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<r3d:institutionContact>gsherloc@stanford.edu</r3d:institutionContact>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>Aspergillus Gene Nomenclature Guide</r3d:policyName>
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<r3d:policyURL>http://www.aspergillusgenome.org/Nomenclature.shtml</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>Copyrights</r3d:dataLicenseName>
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<r3d:dataLicenseURL>http://www.aspergillusgenome.org/</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>restricted</r3d:dataUploadType>
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<r3d:dataUploadRestriction>registration</r3d:dataUploadRestriction>
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</r3d:dataUpload>
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<r3d:dataUploadLicense>
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<r3d:dataUploadLicenseName>Submit data to AspGD</r3d:dataUploadLicenseName>
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<r3d:dataUploadLicenseURL>http://www.aspergillusgenome.org/SubmitContents.shtml</r3d:dataUploadLicenseURL>
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</r3d:dataUploadLicense>
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<r3d:versioning>yes</r3d:versioning>
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<r3d:pidSystem>none</r3d:pidSystem>
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<r3d:citationGuidelineURL>http://www.aspergillusgenome.org//HowToCite.shtml</r3d:citationGuidelineURL>
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<r3d:enhancedPublication>yes</r3d:enhancedPublication>
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<r3d:qualityManagement>unknown</r3d:qualityManagement>
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<r3d:metadataStandard>
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<r3d:metadataStandardName metadataStandardScheme="DCC">Repository-Developed Metadata Schemas</r3d:metadataStandardName>
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<r3d:metadataStandardURL>http://www.dcc.ac.uk/resources/metadata-standards/repository-developed-metadata-schemas</r3d:metadataStandardURL>
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</r3d:metadataStandard>
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<r3d:remarks>Aspergillus Genome Database is covered by Clarivate Data Citation Index</r3d:remarks>
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<r3d:entryDate>2014-11-05</r3d:entryDate>
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<r3d:lastUpdate>2021-04-16</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data> |