r3d100010676 InnateDB A Knowlede Resource for Innate Immunity Interactions & Pathways https://www.innatedb.com/ FAIRsharing_doi:10.25504/FAIRsharing.rb2drw RRID:SCR_006714 RRID:nif-0000-20808 InnateDB is a publicly available database of the genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection. The database captures an improved coverage of the innate immunity interactome by integrating known interactions and pathways from major public databases together with manually-curated data into a centralised resource. The database can be mined as a knowledgebase or used with our integrated bioinformatics and visualization tools for the systems level analysis of the innate immune response. innatedb-mail@sfu.ca disciplinary 27.172 curated interactions; 367.527 total inerations eng 2 Life Sciences 201 Basic Biological and Medical Research 20105 General Genetics 20107 Bioinformatics and Theoretical Biology 204 Microbiology, Virology and Immunology 205 Medicine 20503 Human Genetics 21 Biology 22 Medicine Images Networkbased data Plain text Scientific and statistical data formats Software applications Structured graphics other dataProvider bovine genes human immune response interactomes molecular interaction network mouse proteins rna systems biology AllerGen CAN funding non-profit https://www.allergen.ca/ ROR:048gf2b30 European Molecular Biology Laboratory Australia EMBL Australia AUS funding non-profit https://www.emblaustralia.org/ ROR:00yx5cw48 European Molecular Biology Laboratory Australia, Lynn Group EMBL Australia, Lynn AUS general non-profit https://www.emblaustralia.org/research-leadership/lynn-group/ Flinders University AUS general non-profit https://www.flinders.edu.au/ ROR:01kpzv902 HUPO Proteomics Standards Initiative PSI AUS sponsoring non-profit https://www.psidev.info/ International Molecular Exchange Consortium IMEx AAA general non-profit https://www.imexconsortium.org/ Simon Fraser University, Fiona Brinkman Laboratory Brinkmann Lab CAN general technical non-profit https://www.brinkman.mbb.sfu.ca/ innatedb-mail@sfu.ca South Australian Health & Medical Research Institute SAHMRI AUS general non-profit https://sahmri.org.au/ ROR:03e3kts03 University of British Columbia, R.E.W. Hancock Laboratory CAN general non-profit http://www.cmdr.ubc.ca/bobh/ IMEx Curation Rules https://www.imexconsortium.org/curation/ open open CC https://creativecommons.org/licenses/by/2.5/ Copyrights https://www.innatedb.com/license.jsp restricted registration IMEx data submission https://www.imexconsortium.org/submit-your-data/ other yes https://www.innatedb.com/accessViaWS.jsp https://www.innatedb.com/ unknown unknown InnateDB is active partner of the International Molcular Exchange Consortium (IMEx). Pathway data are from following databases: Kyoto encyclopedia of genes and genomes (KEGG), NCI-Nature Pathway Interaction Database (PID), Integrating Network Objects with Hierarchies (INOH) Pathway Database, NetPath and Reactome. A mirror of InnateDB.com hosted by the David Lynn Group in Australia is available at http://innatedb.sahmri.com. 2014-03-31 2022-06-14