r3d100012052 The Cancer Immunome Atlas TCIA The Cancer Immunome Database The Cancer Immunome Database https://tcia.at/home RRID:SCR_014508 The Cancer Immunome Database (TCIA) provides results of comprehensive immunogenomic analyses of next generation sequencing data (NGS) data for 20 solid cancers from The Cancer Genome Atlas (TCGA) and other datasource. The Cancer Immunome Atlas (TCIA) was developed and is maintained at the Division of Bioinformatics (ICBI). The database can be queried for the gene expression of specific immune-related gene sets, cellular composition of immune infiltrates (characterized using gene set enrichment analyses and deconvolution), neoantigens and cancer-germline antigens, HLA types, and tumor heterogeneity (estimated from cancer cell fractions). Moreover it provides survival analyses for different types immunological parameters. TCIA will be constantly updated with new data and results. dietmar.rieder@i-med.ac.at https://tcia.at/contact icbi@i-med.ac.at zlatko.trajanoski@i-med.ac.at disciplinary 24 projects; 20 diseases; 9.562 cases 2016-06-01 eng 2 Life Sciences 201 Basic Biological and Medical Research 204 Microbiology, Virology and Immunology 20405 Immunology 205 Medicine 20502 Public Health, Health Services Research, Social Medicine 20503 Human Genetics 20514 Hematology, Oncology, Transfusion Medicine 21 Biology 22 Medicine https://tcia.at/about Scientific and statistical data formats Structured graphics Structured text dataProvider MHC cancer gesa immune system immunity immuno-oncology immunom immunophenogram immunophenotype oncology APERIM Advanced Bioinformatics Platform for Personalised Cancer Immunotherapy EEC funding non-profit https://www.up2europe.eu/european/projects/aperim-advanced-bioinformatics-platform-for-personalised-cancer-immunotherapy_27288.html 2018 European Commission, Horizon 2020 EEC funding non-profit https://research-and-innovation.ec.europa.eu/funding/funding-opportunities/funding-programmes-and-open-calls/horizon-2020_en Medical University of Innsbruck, Biocenter, Division of Bioinformatics ICBI Medizinische Universität Innsbruck, Sektion für Bioinformatik AUT general technical non-profit https://icbi.i-med.ac.at/ 2016-06-01 icbi@i-med.ac.at zlatko.trajanoski@i-med.ac.at Freedom of Information Act https://www.cancer.gov/policies/foia Reuse of NCI Information https://www.cancer.gov/policies/copyright-reuse open closed embargoed open restricted CC https://creativecommons.org/licenses/by/4.0/ Copyrights https://www.cancer.gov/policies/copyright-reuse closed unknown none https://tcia.at/about unknown unknown Datasources: TCGA Access TCGA Data: Genomic Data Commons Data Portal https://www.re3data.org/repository/r3d100012061 2016-06-24 2022-11-25