105 lines
8.6 KiB
XML
105 lines
8.6 KiB
XML
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<?xml version="1.0" encoding="utf-8"?>
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<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
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<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
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<r3d:repository>
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<r3d:re3data.orgIdentifier>r3d100013315</r3d:re3data.orgIdentifier>
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<r3d:repositoryName language="eng">VirHostNet</r3d:repositoryName>
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<r3d:repositoryURL>http://virhostnet.prabi.fr</r3d:repositoryURL>
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<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.m3316t</r3d:repositoryIdentifier>
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<r3d:description language="eng">VirHostNet is a bioinformatic information system dedidacted to the biocuration, data integration, reproducible systems-level analysis and visualisation of Virus / Host protein-protein interactions Network based on graph theory. VirHostNet is an open and gold standard knowledgebase shared in PSI MITAB 2.5 format using the PSICQUIC webservice and distributed through the NDEx platform. VirHostNet is FAIR and is recognized as a COVID-19 ressource by Elixir bio.tools, the European Virus Bioinformatics Center and FAIRsharing.org.</r3d:description>
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<r3d:repositoryContact>navratil@prabi.fr</r3d:repositoryContact>
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<r3d:type>disciplinary</r3d:type>
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<r3d:size updated="2021-04-28">40.005 virus-host and virus-virus manually biocurated protein-protein interactions</r3d:size>
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<r3d:startDate>2007</r3d:startDate>
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<r3d:endDate></r3d:endDate>
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<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
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<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
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<r3d:subject subjectScheme="DFG">204 Microbiology, Virology and Immunology</r3d:subject>
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<r3d:subject subjectScheme="DFG">20404 Virology</r3d:subject>
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<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
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<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
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<r3d:missionStatementURL></r3d:missionStatementURL>
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<r3d:contentType contentTypeScheme="parse">Networkbased data</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured graphics</r3d:contentType>
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<r3d:contentType contentTypeScheme="parse">Structured text</r3d:contentType>
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<r3d:providerType>dataProvider</r3d:providerType>
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<r3d:providerType>serviceProvider</r3d:providerType>
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<r3d:keyword>COVID-19</r3d:keyword>
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<r3d:institution>
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<r3d:institutionName language="fra">FINOVI</r3d:institutionName>
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<r3d:institutionAdditionalName language="fra">Fondation Innovations en Infectiologie</r3d:institutionAdditionalName>
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<r3d:institutionAdditionalName language="eng">Foundation Innovation in Infectiology</r3d:institutionAdditionalName>
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<r3d:institutionCountry>FRA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.finovi.org</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:01bgymr29</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="fra">Institut Français de Bioinformatique</r3d:institutionName>
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<r3d:institutionAdditionalName language="eng">French Institute of Bioinformatics</r3d:institutionAdditionalName>
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<r3d:institutionCountry>FRA</r3d:institutionCountry>
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<r3d:responsibilityType>technical</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.france-bioinformatique.fr/en/home/</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:045f7pv37</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="fra">PRABI</r3d:institutionName>
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<r3d:institutionAdditionalName language="fra">Pôle Rhône-Alpes de Bioinformatique</r3d:institutionAdditionalName>
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<r3d:institutionAdditionalName language="eng">Rhône-Alpes Bioinformatics Cente</r3d:institutionAdditionalName>
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<r3d:institutionCountry>FRA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:responsibilityType>general</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>http://www.prabi.fr/</r3d:institutionURL>
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<r3d:institutionIdentifier>VIAF:12145541702696600064</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:institution>
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<r3d:institutionName language="eng">University of Lyon</r3d:institutionName>
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<r3d:institutionAdditionalName language="fra">UDL</r3d:institutionAdditionalName>
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<r3d:institutionAdditionalName language="fra">Université de Lyon</r3d:institutionAdditionalName>
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<r3d:institutionCountry>FRA</r3d:institutionCountry>
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<r3d:responsibilityType>funding</r3d:responsibilityType>
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<r3d:institutionType>non-profit</r3d:institutionType>
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<r3d:institutionURL>https://www.universite-lyon.fr</r3d:institutionURL>
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<r3d:institutionIdentifier>ROR:01rk35k63</r3d:institutionIdentifier>
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<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
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<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
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</r3d:institution>
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<r3d:policy>
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<r3d:policyName>The VirHostScape user guide</r3d:policyName>
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<r3d:policyURL>https://pbil.univ-lyon1.fr/redmine/projects/virhostscape/wiki</r3d:policyURL>
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</r3d:policy>
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<r3d:databaseAccess>
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<r3d:databaseAccessType>open</r3d:databaseAccessType>
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</r3d:databaseAccess>
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<r3d:dataAccess>
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<r3d:dataAccessType>open</r3d:dataAccessType>
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</r3d:dataAccess>
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<r3d:dataLicense>
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<r3d:dataLicenseName>Copyrights</r3d:dataLicenseName>
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<r3d:dataLicenseURL>https://virhostnet.prabi.fr/</r3d:dataLicenseURL>
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</r3d:dataLicense>
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<r3d:dataUpload>
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<r3d:dataUploadType>closed</r3d:dataUploadType>
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</r3d:dataUpload>
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<r3d:software>
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<r3d:softwareName>other</r3d:softwareName>
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</r3d:software>
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<r3d:versioning></r3d:versioning>
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<r3d:api apiType="other">http://virhostnet.prabi.fr:9090/psicquic/webservices/current/search/query/*</r3d:api>
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<r3d:citationGuidelineURL>https://virhostnet.prabi.fr/</r3d:citationGuidelineURL>
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<r3d:enhancedPublication>yes</r3d:enhancedPublication>
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<r3d:qualityManagement>unknown</r3d:qualityManagement>
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<r3d:remarks></r3d:remarks>
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<r3d:entryDate>2020-04-24</r3d:entryDate>
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<r3d:lastUpdate>2021-10-25</r3d:lastUpdate>
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</r3d:repository>
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</r3d:re3data>
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