149 lines
12 KiB
XML
149 lines
12 KiB
XML
|
<?xml version="1.0" encoding="utf-8"?>
|
||
|
|
<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
|
||
|
|
<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
|
||
|
|
<r3d:repository>
|
||
|
|
<r3d:re3data.orgIdentifier>r3d100012529</r3d:re3data.orgIdentifier>
|
||
|
|
<r3d:repositoryName language="eng">ImmPort</r3d:repositoryName>
|
||
|
|
<r3d:additionalName language="eng">Immunology Database and Analysis Portal</r3d:additionalName>
|
||
|
|
<r3d:repositoryURL>https://www.immport.org/shared/home</r3d:repositoryURL>
|
||
|
|
<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.bpkzqp</r3d:repositoryIdentifier>
|
||
|
|
<r3d:repositoryIdentifier>OMICS_16756</r3d:repositoryIdentifier>
|
||
|
|
<r3d:repositoryIdentifier>RRID:SCR_012804</r3d:repositoryIdentifier>
|
||
|
|
<r3d:repositoryIdentifier>RRID:nlx_152691</r3d:repositoryIdentifier>
|
||
|
|
<r3d:description language="eng">The Immunology Database and Analysis Portal (ImmPort) archives clinical study and trial data generated by NIAID/DAIT-funded investigators. Data types housed in ImmPort include subject assessments i.e., medical history, concomitant medications and adverse events as well as mechanistic assay data such as flow cytometry, ELISA, ELISPOT, etc. --- You won't need an ImmPort account to search for compelling studies, peruse study demographics, interventions and mechanistic assays. But why stop there? What you really want to do is download the study, look at each experiment in detail including individual ELISA results and flow cytometry files. Perhaps you want to take those flow cytometry files for a test drive using FLOCK in the ImmPort flow cytometry module. To download all that interesting data you will need to register for ImmPort access.</r3d:description>
|
||
|
|
<r3d:repositoryContact>ImmPort_Helpdesk@immport.org</r3d:repositoryContact>
|
||
|
|
<r3d:type>disciplinary</r3d:type>
|
||
|
|
<r3d:size updated="2021-02-03">Shared Data: 462 studies; 62.793 subjects; 1.851 experiments; 1.621 protocols; 5.936.500 total results</r3d:size>
|
||
|
|
<r3d:startDate>2004</r3d:startDate>
|
||
|
|
<r3d:endDate></r3d:endDate>
|
||
|
|
<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
|
||
|
|
<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">204 Microbiology, Virology and Immunology</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">20405 Immunology</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
|
||
|
|
<r3d:missionStatementURL>https://www.immport.org/about</r3d:missionStatementURL>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Archived data</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Databases</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Plain text</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">other</r3d:contentType>
|
||
|
|
<r3d:providerType>dataProvider</r3d:providerType>
|
||
|
|
<r3d:keyword>FAIR</r3d:keyword>
|
||
|
|
<r3d:keyword>allergy</r3d:keyword>
|
||
|
|
<r3d:keyword>clinical research</r3d:keyword>
|
||
|
|
<r3d:keyword>clinical trials</r3d:keyword>
|
||
|
|
<r3d:keyword>cytometry</r3d:keyword>
|
||
|
|
<r3d:keyword>data service</r3d:keyword>
|
||
|
|
<r3d:keyword>immunology</r3d:keyword>
|
||
|
|
<r3d:keyword>infectious disease</r3d:keyword>
|
||
|
|
<r3d:keyword>ontology</r3d:keyword>
|
||
|
|
<r3d:keyword>proteomics</r3d:keyword>
|
||
|
|
<r3d:keyword>transcriptomics</r3d:keyword>
|
||
|
|
<r3d:keyword>transplantation</r3d:keyword>
|
||
|
|
<r3d:keyword>vaccine</r3d:keyword>
|
||
|
|
<r3d:institution>
|
||
|
|
<r3d:institutionName language="eng">National Institute of Allergy and Infectious Diseases, Division of Allergy, Immunology, and Transplantation</r3d:institutionName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">NIAID, DAIT</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionCountry>USA</r3d:institutionCountry>
|
||
|
|
<r3d:responsibilityType>funding</r3d:responsibilityType>
|
||
|
|
<r3d:responsibilityType>general</r3d:responsibilityType>
|
||
|
|
<r3d:institutionType>non-profit</r3d:institutionType>
|
||
|
|
<r3d:institutionURL>https://www.niaid.nih.gov/about/dait</r3d:institutionURL>
|
||
|
|
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
|
||
|
|
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
|
||
|
|
<r3d:institutionContact>https://www.niaid.nih.gov/about/division-allergy-immunology-transplantation-contacts</r3d:institutionContact>
|
||
|
|
</r3d:institution>
|
||
|
|
<r3d:institution>
|
||
|
|
<r3d:institutionName language="eng">Northrop Grumman Health Solutions</r3d:institutionName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">NGHS</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionCountry>USA</r3d:institutionCountry>
|
||
|
|
<r3d:responsibilityType>technical</r3d:responsibilityType>
|
||
|
|
<r3d:institutionType>commercial</r3d:institutionType>
|
||
|
|
<r3d:institutionURL>https://grantome.com/grant/NIH/316201200036W-0-0-1</r3d:institutionURL>
|
||
|
|
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
|
||
|
|
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
|
||
|
|
<r3d:institutionContact>morgan.crafts@ngc.com</r3d:institutionContact>
|
||
|
|
</r3d:institution>
|
||
|
|
<r3d:institution>
|
||
|
|
<r3d:institutionName language="eng">United States Department of Health and Human Services</r3d:institutionName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">HHS</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionCountry>USA</r3d:institutionCountry>
|
||
|
|
<r3d:responsibilityType>funding</r3d:responsibilityType>
|
||
|
|
<r3d:institutionType>non-profit</r3d:institutionType>
|
||
|
|
<r3d:institutionURL>https://www.hhs.gov/</r3d:institutionURL>
|
||
|
|
<r3d:institutionIdentifier>ROR:033jnv181</r3d:institutionIdentifier>
|
||
|
|
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
|
||
|
|
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
|
||
|
|
</r3d:institution>
|
||
|
|
<r3d:institution>
|
||
|
|
<r3d:institutionName language="eng">University of California San Francisco</r3d:institutionName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">UC San Francisco</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">UCSF</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionCountry>USA</r3d:institutionCountry>
|
||
|
|
<r3d:responsibilityType>technical</r3d:responsibilityType>
|
||
|
|
<r3d:institutionType>non-profit</r3d:institutionType>
|
||
|
|
<r3d:institutionURL>https://www.ucsf.edu/</r3d:institutionURL>
|
||
|
|
<r3d:institutionIdentifier>ROR:043mz5j54</r3d:institutionIdentifier>
|
||
|
|
<r3d:institutionIdentifier>RRID:SCR_010605</r3d:institutionIdentifier>
|
||
|
|
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
|
||
|
|
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
|
||
|
|
<r3d:institutionContact>Atul.Butte@ucsf.edu</r3d:institutionContact>
|
||
|
|
</r3d:institution>
|
||
|
|
<r3d:policy>
|
||
|
|
<r3d:policyName>Core Trust Seal</r3d:policyName>
|
||
|
|
<r3d:policyURL>https://www.coretrustseal.org/wp-content/uploads/2022/01/20220128-Edinburgh_Datashare_final.pdf</r3d:policyURL>
|
||
|
|
</r3d:policy>
|
||
|
|
<r3d:policy>
|
||
|
|
<r3d:policyName>User Agreement for the NIAID Immunology Database and Analysis Portal (ImmPort)i</r3d:policyName>
|
||
|
|
<r3d:policyURL>https://www.immport.org/agreement</r3d:policyURL>
|
||
|
|
</r3d:policy>
|
||
|
|
<r3d:databaseAccess>
|
||
|
|
<r3d:databaseAccessType>open</r3d:databaseAccessType>
|
||
|
|
</r3d:databaseAccess>
|
||
|
|
<r3d:dataAccess>
|
||
|
|
<r3d:dataAccessType>embargoed</r3d:dataAccessType>
|
||
|
|
</r3d:dataAccess>
|
||
|
|
<r3d:dataAccess>
|
||
|
|
<r3d:dataAccessType>open</r3d:dataAccessType>
|
||
|
|
</r3d:dataAccess>
|
||
|
|
<r3d:dataAccess>
|
||
|
|
<r3d:dataAccessType>restricted</r3d:dataAccessType>
|
||
|
|
<r3d:dataAccessRestriction>registration</r3d:dataAccessRestriction>
|
||
|
|
</r3d:dataAccess>
|
||
|
|
<r3d:dataLicense>
|
||
|
|
<r3d:dataLicenseName>other</r3d:dataLicenseName>
|
||
|
|
<r3d:dataLicenseURL>https://www.immport.org/agreement</r3d:dataLicenseURL>
|
||
|
|
</r3d:dataLicense>
|
||
|
|
<r3d:dataUpload>
|
||
|
|
<r3d:dataUploadType>restricted</r3d:dataUploadType>
|
||
|
|
<r3d:dataUploadRestriction>registration</r3d:dataUploadRestriction>
|
||
|
|
</r3d:dataUpload>
|
||
|
|
<r3d:dataUploadLicense>
|
||
|
|
<r3d:dataUploadLicenseName>Data Upload</r3d:dataUploadLicenseName>
|
||
|
|
<r3d:dataUploadLicenseURL>https://www.immport.org/dataUpload</r3d:dataUploadLicenseURL>
|
||
|
|
</r3d:dataUploadLicense>
|
||
|
|
<r3d:software>
|
||
|
|
<r3d:softwareName>MySQL</r3d:softwareName>
|
||
|
|
</r3d:software>
|
||
|
|
<r3d:software>
|
||
|
|
<r3d:softwareName>other</r3d:softwareName>
|
||
|
|
</r3d:software>
|
||
|
|
<r3d:versioning>yes</r3d:versioning>
|
||
|
|
<r3d:api apiType="REST">https://docs.immport.org/</r3d:api>
|
||
|
|
<r3d:pidSystem>DOI</r3d:pidSystem>
|
||
|
|
<r3d:citationGuidelineURL>https://www.immport.org/cite</r3d:citationGuidelineURL>
|
||
|
|
<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
|
||
|
|
<r3d:qualityManagement>yes</r3d:qualityManagement>
|
||
|
|
<r3d:certificate>other</r3d:certificate>
|
||
|
|
<r3d:metadataStandard>
|
||
|
|
<r3d:metadataStandardName metadataStandardScheme="DCC">Repository-Developed Metadata Schemas</r3d:metadataStandardName>
|
||
|
|
<r3d:metadataStandardURL>http://www.dcc.ac.uk/resources/metadata-standards/repository-developed-metadata-schemas</r3d:metadataStandardURL>
|
||
|
|
</r3d:metadataStandard>
|
||
|
|
<r3d:remarks>is covered by Elsevier. ImmPort is a regular member of the World Data System - WDS.</r3d:remarks>
|
||
|
|
<r3d:entryDate>2017-11-07</r3d:entryDate>
|
||
|
|
<r3d:lastUpdate>2022-04-25</r3d:lastUpdate>
|
||
|
|
</r3d:repository>
|
||
|
|
</r3d:re3data>
|