140 lines
11 KiB
XML
140 lines
11 KiB
XML
|
<?xml version="1.0" encoding="utf-8"?>
|
||
|
|
<!--re3data.org Schema for the Description of Research Data Repositories. Version 2.2, December 2014. doi:10.2312/re3.006-->
|
||
|
|
<r3d:re3data xmlns:r3d="http://www.re3data.org/schema/2-2" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.re3data.org/schema/2-2 http://schema.re3data.org/2-2/re3dataV2-2.xsd">
|
||
|
|
<r3d:repository>
|
||
|
|
<r3d:re3data.orgIdentifier>r3d100011560</r3d:re3data.orgIdentifier>
|
||
|
|
<r3d:repositoryName language="eng">Sicas Medical Image Repository</r3d:repositoryName>
|
||
|
|
<r3d:additionalName language="eng">SMIR</r3d:additionalName>
|
||
|
|
<r3d:additionalName language="eng">formerly: Virtual Skeleton Database</r3d:additionalName>
|
||
|
|
<r3d:repositoryURL>https://www.smir.ch</r3d:repositoryURL>
|
||
|
|
<r3d:repositoryIdentifier>FAIRsharing_doi:10.25504/FAIRsharing.vcmz9h</r3d:repositoryIdentifier>
|
||
|
|
<r3d:description language="eng">The SICAS Medical Image Repository is a freely accessible repository containing medical research data including medical images, surface models, clinical data, genomics data and statistical shape models. The data can freely be organized and shared on SMIR and made publicly accessible with a DOI. Dedicated data sets are organized as collections of anatomical regions (e.g Cochlea). The data can be filtered using a modular search and accessed on the web or through the SMIR API.</r3d:description>
|
||
|
|
<r3d:repositoryContact>contact@si-cas.com</r3d:repositoryContact>
|
||
|
|
<r3d:type>disciplinary</r3d:type>
|
||
|
|
<r3d:size updated="2015-03-19">community uploads and more than 100 high quality full-body CT-scans are available</r3d:size>
|
||
|
|
<r3d:startDate></r3d:startDate>
|
||
|
|
<r3d:endDate></r3d:endDate>
|
||
|
|
<r3d:repositoryLanguage>eng</r3d:repositoryLanguage>
|
||
|
|
<r3d:subject subjectScheme="DFG">2 Life Sciences</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">201 Basic Biological and Medical Research</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">205 Medicine</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">20501 Epidemiology, Medical Biometry, Medical Informatics</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">20502 Public Health, Health Services Research, Social Medicine</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">20514 Hematology, Oncology, Transfusion Medicine</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">21 Biology</r3d:subject>
|
||
|
|
<r3d:subject subjectScheme="DFG">22 Medicine</r3d:subject>
|
||
|
|
<r3d:missionStatementURL>http://si-cas.com/ncssm/about.htm</r3d:missionStatementURL>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Images</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Raw data</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">Scientific and statistical data formats</r3d:contentType>
|
||
|
|
<r3d:contentType contentTypeScheme="parse">other</r3d:contentType>
|
||
|
|
<r3d:providerType>dataProvider</r3d:providerType>
|
||
|
|
<r3d:keyword>VSD</r3d:keyword>
|
||
|
|
<r3d:keyword>biomechanics</r3d:keyword>
|
||
|
|
<r3d:keyword>biomedical research</r3d:keyword>
|
||
|
|
<r3d:keyword>brain tumor image</r3d:keyword>
|
||
|
|
<r3d:keyword>computer tomography</r3d:keyword>
|
||
|
|
<r3d:keyword>demographic analysis</r3d:keyword>
|
||
|
|
<r3d:keyword>image processing</r3d:keyword>
|
||
|
|
<r3d:keyword>medical informatics</r3d:keyword>
|
||
|
|
<r3d:keyword>statistical models</r3d:keyword>
|
||
|
|
<r3d:institution>
|
||
|
|
<r3d:institutionName language="eng">National Center Of Competence in Statistical Shape Modeling</r3d:institutionName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">NCSSM</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionCountry>CHE</r3d:institutionCountry>
|
||
|
|
<r3d:responsibilityType>general</r3d:responsibilityType>
|
||
|
|
<r3d:institutionType>non-profit</r3d:institutionType>
|
||
|
|
<r3d:institutionURL>http://si-cas.com/ncssm/index.htm</r3d:institutionURL>
|
||
|
|
<r3d:responsibilityStartDate></r3d:responsibilityStartDate>
|
||
|
|
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
|
||
|
|
<r3d:institutionContact>http://si-cas.com/ncssm/contact.htm</r3d:institutionContact>
|
||
|
|
</r3d:institution>
|
||
|
|
<r3d:institution>
|
||
|
|
<r3d:institutionName language="eng">SICAS</r3d:institutionName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">Swiss Institute for Computer Assisted Surgery</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionCountry>CHE</r3d:institutionCountry>
|
||
|
|
<r3d:responsibilityType>funding</r3d:responsibilityType>
|
||
|
|
<r3d:responsibilityType>general</r3d:responsibilityType>
|
||
|
|
<r3d:responsibilityType>technical</r3d:responsibilityType>
|
||
|
|
<r3d:institutionType>non-profit</r3d:institutionType>
|
||
|
|
<r3d:institutionURL>http://si-cas.com/</r3d:institutionURL>
|
||
|
|
<r3d:responsibilityStartDate>2013-01-01</r3d:responsibilityStartDate>
|
||
|
|
<r3d:responsibilityEndDate></r3d:responsibilityEndDate>
|
||
|
|
<r3d:institutionContact>http://www.si-cas.com/index.php/contact</r3d:institutionContact>
|
||
|
|
<r3d:institutionContact>michael.kistler@si-cas.com</r3d:institutionContact>
|
||
|
|
</r3d:institution>
|
||
|
|
<r3d:institution>
|
||
|
|
<r3d:institutionName language="eng">University of Bern, Institute for Surgical Technology and Biomechanics</r3d:institutionName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">ISTB</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionAdditionalName language="eng">Institute for Surgical Technology and Biomechanics</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionAdditionalName language="deu">Universität Bern, Institut für chirurgische Technologien und Biomechanik</r3d:institutionAdditionalName>
|
||
|
|
<r3d:institutionCountry>CHE</r3d:institutionCountry>
|
||
|
|
<r3d:responsibilityType>general</r3d:responsibilityType>
|
||
|
|
<r3d:responsibilityType>technical</r3d:responsibilityType>
|
||
|
|
<r3d:institutionType>non-profit</r3d:institutionType>
|
||
|
|
<r3d:institutionURL>http://www.istb.unibe.ch/content/index_eng.html</r3d:institutionURL>
|
||
|
|
<r3d:responsibilityStartDate>2008-12-01</r3d:responsibilityStartDate>
|
||
|
|
<r3d:responsibilityEndDate>2012-12-31</r3d:responsibilityEndDate>
|
||
|
|
<r3d:institutionContact>michael.kistler@istb.unibe.ch</r3d:institutionContact>
|
||
|
|
</r3d:institution>
|
||
|
|
<r3d:policy>
|
||
|
|
<r3d:policyName>Terms and Conditons</r3d:policyName>
|
||
|
|
<r3d:policyURL>https://www.smir.ch/Home/TermsAndConditions</r3d:policyURL>
|
||
|
|
</r3d:policy>
|
||
|
|
<r3d:databaseAccess>
|
||
|
|
<r3d:databaseAccessType>open</r3d:databaseAccessType>
|
||
|
|
</r3d:databaseAccess>
|
||
|
|
<r3d:dataAccess>
|
||
|
|
<r3d:dataAccessType>open</r3d:dataAccessType>
|
||
|
|
<r3d:dataAccessRestriction>registration</r3d:dataAccessRestriction>
|
||
|
|
</r3d:dataAccess>
|
||
|
|
<r3d:dataAccess>
|
||
|
|
<r3d:dataAccessType>restricted</r3d:dataAccessType>
|
||
|
|
<r3d:dataAccessRestriction>other</r3d:dataAccessRestriction>
|
||
|
|
<r3d:dataAccessRestriction>registration</r3d:dataAccessRestriction>
|
||
|
|
</r3d:dataAccess>
|
||
|
|
<r3d:dataLicense>
|
||
|
|
<r3d:dataLicenseName>CC</r3d:dataLicenseName>
|
||
|
|
<r3d:dataLicenseURL>https://creativecommons.org/licenses/</r3d:dataLicenseURL>
|
||
|
|
</r3d:dataLicense>
|
||
|
|
<r3d:dataLicense>
|
||
|
|
<r3d:dataLicenseName>ODC</r3d:dataLicenseName>
|
||
|
|
<r3d:dataLicenseURL>https://opendatacommons.org/licenses/</r3d:dataLicenseURL>
|
||
|
|
</r3d:dataLicense>
|
||
|
|
<r3d:dataLicense>
|
||
|
|
<r3d:dataLicenseName>other</r3d:dataLicenseName>
|
||
|
|
<r3d:dataLicenseURL>https://www.smir.ch/Home/TermsAndConditions</r3d:dataLicenseURL>
|
||
|
|
</r3d:dataLicense>
|
||
|
|
<r3d:dataUpload>
|
||
|
|
<r3d:dataUploadType>restricted</r3d:dataUploadType>
|
||
|
|
<r3d:dataUploadRestriction>registration</r3d:dataUploadRestriction>
|
||
|
|
</r3d:dataUpload>
|
||
|
|
<r3d:dataUploadLicense>
|
||
|
|
<r3d:dataUploadLicenseName>Creative Commons</r3d:dataUploadLicenseName>
|
||
|
|
<r3d:dataUploadLicenseURL>https://creativecommons.org/licenses/</r3d:dataUploadLicenseURL>
|
||
|
|
</r3d:dataUploadLicense>
|
||
|
|
<r3d:dataUploadLicense>
|
||
|
|
<r3d:dataUploadLicenseName>Open Data Commons</r3d:dataUploadLicenseName>
|
||
|
|
<r3d:dataUploadLicenseURL>https://opendatacommons.org/licenses/</r3d:dataUploadLicenseURL>
|
||
|
|
</r3d:dataUploadLicense>
|
||
|
|
<r3d:software>
|
||
|
|
<r3d:softwareName>other</r3d:softwareName>
|
||
|
|
</r3d:software>
|
||
|
|
<r3d:versioning>yes</r3d:versioning>
|
||
|
|
<r3d:api apiType="REST">https://www.smir.ch/api/help</r3d:api>
|
||
|
|
<r3d:pidSystem>DOI</r3d:pidSystem>
|
||
|
|
<r3d:citationGuidelineURL>https://www.smir.ch/Home/TermsAndConditions</r3d:citationGuidelineURL>
|
||
|
|
<r3d:aidSystem>none</r3d:aidSystem>
|
||
|
|
<r3d:enhancedPublication>unknown</r3d:enhancedPublication>
|
||
|
|
<r3d:qualityManagement>yes</r3d:qualityManagement>
|
||
|
|
<r3d:metadataStandard>
|
||
|
|
<r3d:metadataStandardName metadataStandardScheme="DCC">Dublin Core</r3d:metadataStandardName>
|
||
|
|
<r3d:metadataStandardURL>http://www.dcc.ac.uk/resources/metadata-standards/dublin-core</r3d:metadataStandardURL>
|
||
|
|
</r3d:metadataStandard>
|
||
|
|
<r3d:syndication syndicationType="RSS">https://blog.smir.ch/?feed=comments-rss2</r3d:syndication>
|
||
|
|
<r3d:syndication syndicationType="RSS">https://blog.smir.ch/?feed=rss2</r3d:syndication>
|
||
|
|
<r3d:remarks>SMIR contains BRATS (Brain Tumor Segmentation)2012 ff, ISLES (Ischemic Ischemic Stroke Lesion Segmentation) 2015 ff and Shape (Statistical Shape Model Challenge) 2014.</r3d:remarks>
|
||
|
|
<r3d:entryDate>2015-03-19</r3d:entryDate>
|
||
|
|
<r3d:lastUpdate>2022-08-25</r3d:lastUpdate>
|
||
|
|
</r3d:repository>
|
||
|
|
</r3d:re3data>
|