forked from D-Net/dnet-hadoop
Merge pull request 'import from db using is vocabularies' (#17) from result_pids into master
Looks good, thanks Michele!
This commit is contained in:
commit
91d78b825b
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@ -39,9 +39,6 @@ import eu.dnetlib.dhp.schema.oaf.Project;
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import eu.dnetlib.dhp.schema.oaf.Publication;
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import eu.dnetlib.dhp.schema.oaf.Publication;
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import eu.dnetlib.dhp.schema.oaf.Relation;
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import eu.dnetlib.dhp.schema.oaf.Relation;
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import eu.dnetlib.dhp.schema.oaf.Software;
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import eu.dnetlib.dhp.schema.oaf.Software;
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import eu.dnetlib.dhp.utils.ISLookupClientFactory;
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException;
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService;
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import scala.Tuple2;
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import scala.Tuple2;
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public class GenerateEntitiesApplication {
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public class GenerateEntitiesApplication {
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@ -68,13 +65,9 @@ public class GenerateEntitiesApplication {
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final String sourcePaths = parser.get("sourcePaths");
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final String sourcePaths = parser.get("sourcePaths");
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final String targetPath = parser.get("targetPath");
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final String targetPath = parser.get("targetPath");
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// final String dbUrl = parser.get("postgresUrl");
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final String isLookupUrl = parser.get("islookup");
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// final String dbUser = parser.get("postgresUser");
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// final String dbPassword = parser.get("postgresPassword");
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final String isLookupUrl = parser.get("isLookupUrl");
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final VocabularyGroup vocs = VocabularyGroup.loadVocsFromIS(isLookupUrl);
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final VocabularyGroup vocs = loadVocsFromIS(isLookupUrl); // MAP: vocId -> voc
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final SparkConf conf = new SparkConf();
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final SparkConf conf = new SparkConf();
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runWithSparkSession(conf, isSparkSessionManaged, spark -> {
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runWithSparkSession(conf, isSparkSessionManaged, spark -> {
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@ -165,35 +158,6 @@ public class GenerateEntitiesApplication {
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}
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}
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}
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}
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private static VocabularyGroup loadVocsFromIS(final String isLookupUrl) throws IOException, ISLookUpException {
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final ISLookUpService isLookUpService = ISLookupClientFactory.getLookUpService(isLookupUrl);
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final String xquery = IOUtils
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.toString(
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GenerateEntitiesApplication.class
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.getResourceAsStream("/eu/dnetlib/dhp/oa/graph/xquery/load_vocabularies.xquery"));
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final VocabularyGroup vocs = new VocabularyGroup();
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for (final String s : isLookUpService.quickSearchProfile(xquery)) {
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final String[] arr = s.split("@=@");
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if (arr.length == 4) {
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final String vocId = arr[0].trim();
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final String vocName = arr[1].trim();
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final String termId = arr[2].trim();
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final String termName = arr[3].trim();
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if (!vocs.vocabularyExists(vocId)) {
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vocs.addVocabulary(vocId, vocName);
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}
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vocs.addTerm(vocId, termId, termName);
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}
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}
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return vocs;
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}
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private static Oaf convertFromJson(final String s, final Class<? extends Oaf> clazz) {
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private static Oaf convertFromJson(final String s, final Class<? extends Oaf> clazz) {
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try {
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try {
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return OBJECT_MAPPER.readValue(s, clazz);
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return OBJECT_MAPPER.readValue(s, clazz);
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@ -10,7 +10,28 @@ import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.listFields;
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import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.listKeyValues;
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import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.listKeyValues;
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import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier;
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import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.qualifier;
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import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty;
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import static eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils.structuredProperty;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.*;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.DATASET_DEFAULT_RESULTTYPE;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.DATASOURCE_ORGANIZATION;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.DNET_PROVENANCE_ACTIONS;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.ENTITYREGISTRY_PROVENANCE_ACTION;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.HAS_PARTICIPANT;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.IS_PARTICIPANT;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.IS_PRODUCED_BY;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.IS_PROVIDED_BY;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.IS_RELATED_TO;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.ORP_DEFAULT_RESULTTYPE;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.OUTCOME;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.PARTICIPATION;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.PRODUCES;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.PROJECT_ORGANIZATION;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.PROVIDES;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.PROVISION;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.PUBLICATION_DEFAULT_RESULTTYPE;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.RELATIONSHIP;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.RESULT_PROJECT;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.RESULT_RESULT;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.SOFTWARE_DEFAULT_RESULTTYPE;
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import static eu.dnetlib.dhp.schema.common.ModelConstants.USER_CLAIM;
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import java.io.Closeable;
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import java.io.Closeable;
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import java.io.IOException;
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import java.io.IOException;
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@ -32,6 +53,7 @@ import org.apache.commons.logging.LogFactory;
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import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.application.ArgumentApplicationParser;
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import eu.dnetlib.dhp.common.DbClient;
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import eu.dnetlib.dhp.common.DbClient;
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import eu.dnetlib.dhp.oa.graph.raw.common.AbstractMigrationApplication;
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import eu.dnetlib.dhp.oa.graph.raw.common.AbstractMigrationApplication;
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import eu.dnetlib.dhp.oa.graph.raw.common.VocabularyGroup;
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import eu.dnetlib.dhp.schema.oaf.Context;
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import eu.dnetlib.dhp.schema.oaf.Context;
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import eu.dnetlib.dhp.schema.oaf.DataInfo;
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import eu.dnetlib.dhp.schema.oaf.DataInfo;
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import eu.dnetlib.dhp.schema.oaf.Dataset;
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import eu.dnetlib.dhp.schema.oaf.Dataset;
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@ -61,6 +83,8 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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private final long lastUpdateTimestamp;
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private final long lastUpdateTimestamp;
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private final VocabularyGroup vocs;
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public static void main(final String[] args) throws Exception {
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public static void main(final String[] args) throws Exception {
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(
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final ArgumentApplicationParser parser = new ArgumentApplicationParser(
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IOUtils
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IOUtils
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@ -73,13 +97,14 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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final String dbUrl = parser.get("postgresUrl");
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final String dbUrl = parser.get("postgresUrl");
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final String dbUser = parser.get("postgresUser");
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final String dbUser = parser.get("postgresUser");
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final String dbPassword = parser.get("postgresPassword");
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final String dbPassword = parser.get("postgresPassword");
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final String isLookupUrl = parser.get("islookup");
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final String hdfsPath = parser.get("hdfsPath");
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final String hdfsPath = parser.get("hdfsPath");
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final boolean processClaims = parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims");
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final boolean processClaims = parser.get("action") != null && parser.get("action").equalsIgnoreCase("claims");
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try (final MigrateDbEntitiesApplication smdbe = new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser,
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try (final MigrateDbEntitiesApplication smdbe = new MigrateDbEntitiesApplication(hdfsPath, dbUrl, dbUser,
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dbPassword)) {
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dbPassword, isLookupUrl)) {
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if (processClaims) {
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if (processClaims) {
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log.info("Processing claims...");
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log.info("Processing claims...");
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smdbe.execute("queryClaims.sql", smdbe::processClaims);
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smdbe.execute("queryClaims.sql", smdbe::processClaims);
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@ -103,18 +128,21 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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}
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}
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}
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}
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protected MigrateDbEntitiesApplication() { // ONLY FOR UNIT TEST
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protected MigrateDbEntitiesApplication(final VocabularyGroup vocs) { // ONLY FOR UNIT TEST
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super();
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super();
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this.dbClient = null;
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this.dbClient = null;
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this.lastUpdateTimestamp = new Date().getTime();
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this.lastUpdateTimestamp = new Date().getTime();
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this.vocs = vocs;
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}
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}
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public MigrateDbEntitiesApplication(
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public MigrateDbEntitiesApplication(
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final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword)
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final String hdfsPath, final String dbUrl, final String dbUser, final String dbPassword,
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final String isLookupUrl)
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throws Exception {
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throws Exception {
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super(hdfsPath);
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super(hdfsPath);
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this.dbClient = new DbClient(dbUrl, dbUser, dbPassword);
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this.dbClient = new DbClient(dbUrl, dbUser, dbPassword);
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this.lastUpdateTimestamp = new Date().getTime();
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this.lastUpdateTimestamp = new Date().getTime();
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this.vocs = VocabularyGroup.loadVocsFromIS(isLookupUrl);
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}
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}
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public void execute(final String sqlFile, final Function<ResultSet, List<Oaf>> producer)
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public void execute(final String sqlFile, final Function<ResultSet, List<Oaf>> producer)
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@ -453,12 +481,7 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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final Boolean inferred = rs.getBoolean("inferred");
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final Boolean inferred = rs.getBoolean("inferred");
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final String trust = rs.getString("trust");
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final String trust = rs.getString("trust");
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return dataInfo(
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return dataInfo(
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deletedbyinference,
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deletedbyinference, inferenceprovenance, inferred, false, ENTITYREGISTRY_PROVENANCE_ACTION, trust);
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inferenceprovenance,
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inferred,
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false,
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ENTITYREGISTRY_PROVENANCE_ACTION,
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trust);
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}
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}
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private Qualifier prepareQualifierSplitting(final String s) {
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private Qualifier prepareQualifierSplitting(final String s) {
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@ -466,7 +489,7 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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return null;
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return null;
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}
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}
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final String[] arr = s.split("@@@");
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final String[] arr = s.split("@@@");
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return arr.length == 4 ? qualifier(arr[0], arr[1], arr[2], arr[3]) : null;
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return arr.length == 2 ? vocs.getTermAsQualifier(arr[1], arr[0]) : null;
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}
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}
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private List<Field<String>> prepareListFields(final Array array, final DataInfo info) {
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private List<Field<String>> prepareListFields(final Array array, final DataInfo info) {
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@ -485,8 +508,8 @@ public class MigrateDbEntitiesApplication extends AbstractMigrationApplication i
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if (parts.length == 2) {
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if (parts.length == 2) {
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final String value = parts[0];
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final String value = parts[0];
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final String[] arr = parts[1].split("@@@");
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final String[] arr = parts[1].split("@@@");
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if (arr.length == 4) {
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if (arr.length == 2) {
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return structuredProperty(value, arr[0], arr[1], arr[2], arr[3], dataInfo);
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return structuredProperty(value, vocs.getTermAsQualifier(arr[1], arr[0]), dataInfo);
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}
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}
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}
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}
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return null;
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return null;
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@ -1,13 +1,50 @@
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package eu.dnetlib.dhp.oa.graph.raw.common;
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package eu.dnetlib.dhp.oa.graph.raw.common;
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import java.io.IOException;
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import java.util.HashMap;
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import java.util.HashMap;
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import java.util.Map;
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import java.util.Map;
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import org.apache.commons.io.IOUtils;
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import org.apache.commons.lang3.StringUtils;
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import eu.dnetlib.dhp.oa.graph.raw.GenerateEntitiesApplication;
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import eu.dnetlib.dhp.schema.oaf.Qualifier;
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import eu.dnetlib.dhp.schema.oaf.Qualifier;
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import eu.dnetlib.dhp.utils.ISLookupClientFactory;
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException;
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import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpService;
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public class VocabularyGroup {
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public class VocabularyGroup {
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public static VocabularyGroup loadVocsFromIS(final String isLookupUrl) throws IOException, ISLookUpException {
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final ISLookUpService isLookUpService = ISLookupClientFactory.getLookUpService(isLookupUrl);
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final String xquery = IOUtils
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.toString(
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GenerateEntitiesApplication.class
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.getResourceAsStream("/eu/dnetlib/dhp/oa/graph/xquery/load_vocabularies.xquery"));
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final VocabularyGroup vocs = new VocabularyGroup();
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for (final String s : isLookUpService.quickSearchProfile(xquery)) {
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final String[] arr = s.split("@=@");
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if (arr.length == 4) {
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final String vocId = arr[0].trim();
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final String vocName = arr[1].trim();
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final String termId = arr[2].trim();
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final String termName = arr[3].trim();
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if (!vocs.vocabularyExists(vocId)) {
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vocs.addVocabulary(vocId, vocName);
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}
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vocs.addTerm(vocId, termId, termName);
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}
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}
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return vocs;
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}
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private final Map<String, Vocabulary> vocs = new HashMap<>();
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private final Map<String, Vocabulary> vocs = new HashMap<>();
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public void addVocabulary(final String id, final String name) {
|
public void addVocabulary(final String id, final String name) {
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@ -29,7 +66,9 @@ public class VocabularyGroup {
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}
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}
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public Qualifier getTermAsQualifier(final String vocId, final String id) {
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public Qualifier getTermAsQualifier(final String vocId, final String id) {
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if (termExists(vocId, id)) {
|
if (StringUtils.isBlank(id)) {
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return OafMapperUtils.qualifier("UNKNOWN", "UNKNOWN", vocId, vocId);
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|
} else if (termExists(vocId, id)) {
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final Vocabulary v = vocs.get(vocId.toLowerCase());
|
final Vocabulary v = vocs.get(vocId.toLowerCase());
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final VocabularyTerm t = v.getTerm(id);
|
final VocabularyTerm t = v.getTerm(id);
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return OafMapperUtils.qualifier(t.getId(), t.getName(), v.getId(), v.getName());
|
return OafMapperUtils.qualifier(t.getId(), t.getName(), v.getId(), v.getName());
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|
|
|
@ -28,5 +28,11 @@
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"paramLongName": "action",
|
"paramLongName": "action",
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"paramDescription": "process claims",
|
"paramDescription": "process claims",
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"paramRequired": false
|
"paramRequired": false
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|
},
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|
{
|
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|
"paramName": "islookup",
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||||||
|
"paramLongName": "islookup",
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|
"paramDescription": "the url of the ISLookupService",
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|
"paramRequired": true
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}
|
}
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]
|
]
|
|
@ -173,6 +173,7 @@
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<arg>--postgresUrl</arg><arg>${postgresURL}</arg>
|
<arg>--postgresUrl</arg><arg>${postgresURL}</arg>
|
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<arg>--postgresUser</arg><arg>${postgresUser}</arg>
|
<arg>--postgresUser</arg><arg>${postgresUser}</arg>
|
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<arg>--postgresPassword</arg><arg>${postgresPassword}</arg>
|
<arg>--postgresPassword</arg><arg>${postgresPassword}</arg>
|
||||||
|
<arg>--islookup</arg><arg>${isLookupUrl}</arg>
|
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</java>
|
</java>
|
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<ok to="ImportODF"/>
|
<ok to="ImportODF"/>
|
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<error to="Kill"/>
|
<error to="Kill"/>
|
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|
|
|
@ -24,6 +24,10 @@
|
||||||
<name>mongoDb</name>
|
<name>mongoDb</name>
|
||||||
<description>mongo database</description>
|
<description>mongo database</description>
|
||||||
</property>
|
</property>
|
||||||
|
<property>
|
||||||
|
<name>isLookupUrl</name>
|
||||||
|
<description>the address of the lookUp service</description>
|
||||||
|
</property>
|
||||||
<property>
|
<property>
|
||||||
<name>sparkDriverMemory</name>
|
<name>sparkDriverMemory</name>
|
||||||
<description>memory for driver process</description>
|
<description>memory for driver process</description>
|
||||||
|
@ -62,6 +66,7 @@
|
||||||
<arg>-pgurl</arg><arg>${postgresURL}</arg>
|
<arg>-pgurl</arg><arg>${postgresURL}</arg>
|
||||||
<arg>-pguser</arg><arg>${postgresUser}</arg>
|
<arg>-pguser</arg><arg>${postgresUser}</arg>
|
||||||
<arg>-pgpasswd</arg><arg>${postgresPassword}</arg>
|
<arg>-pgpasswd</arg><arg>${postgresPassword}</arg>
|
||||||
|
<arg>-islookup</arg><arg>${isLookupUrl}</arg>
|
||||||
</java>
|
</java>
|
||||||
<ok to="ImportODF"/>
|
<ok to="ImportODF"/>
|
||||||
<error to="Kill"/>
|
<error to="Kill"/>
|
||||||
|
|
|
@ -1,17 +1,16 @@
|
||||||
SELECT
|
SELECT
|
||||||
dor.datasource AS datasource,
|
dor.datasource AS datasource,
|
||||||
dor.organization AS organization,
|
dor.organization AS organization,
|
||||||
NULL AS startdate,
|
NULL AS startdate,
|
||||||
NULL AS enddate,
|
NULL AS enddate,
|
||||||
false AS inferred,
|
false AS inferred,
|
||||||
false AS deletedbyinference,
|
false AS deletedbyinference,
|
||||||
0.9 AS trust,
|
0.9 AS trust,
|
||||||
NULL AS inferenceprovenance,
|
NULL AS inferenceprovenance,
|
||||||
dc.id AS collectedfromid,
|
dc.id AS collectedfromid,
|
||||||
dc.officialname AS collectedfromname,
|
dc.officialname AS collectedfromname,
|
||||||
'providedBy@@@provided by@@@dnet:datasources_organizations_typologies@@@dnet:datasources_organizations_typologies' AS semantics,
|
'providedBy@@@dnet:datasources_organizations_typologies' AS semantics,
|
||||||
d.provenanceaction || '@@@' || d.provenanceaction || '@@@dnet:provenanceActions@@@dnet:provenanceActions' AS provenanceaction
|
d.provenanceaction || '@@@dnet:provenanceActions' AS provenanceaction
|
||||||
|
|
||||||
FROM dsm_datasource_organization dor
|
FROM dsm_datasource_organization dor
|
||||||
LEFT OUTER JOIN dsm_datasources d ON (dor.datasource = d.id)
|
LEFT OUTER JOIN dsm_datasources d ON (dor.datasource = d.id)
|
||||||
LEFT OUTER JOIN dsm_datasources dc ON (dc.id = d.collectedfrom)
|
LEFT OUTER JOIN dsm_datasources dc ON (dc.id = d.collectedfrom)
|
||||||
|
|
|
@ -7,36 +7,36 @@ SELECT
|
||||||
CASE
|
CASE
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['openaire-cris_1.1'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['openaire-cris_1.1'])
|
||||||
THEN
|
THEN
|
||||||
'openaire-cris_1.1@@@OpenAIRE CRIS v1.1@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'openaire-cris_1.1@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['openaire4.0'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['openaire4.0'])
|
||||||
THEN
|
THEN
|
||||||
'openaire4.0@@@OpenAIRE 4.0@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'openaire4.0@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['driver', 'openaire2.0'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility):: TEXT) @> ARRAY ['driver', 'openaire2.0'])
|
||||||
THEN
|
THEN
|
||||||
'driver-openaire2.0@@@OpenAIRE 2.0+ (DRIVER OA, EC funding)@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'driver-openaire2.0@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['driver'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['driver'])
|
||||||
THEN
|
THEN
|
||||||
'driver@@@OpenAIRE Basic (DRIVER OA)@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'driver@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['openaire2.0'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['openaire2.0'])
|
||||||
THEN
|
THEN
|
||||||
'openaire2.0@@@OpenAIRE 2.0 (EC funding)@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'openaire2.0@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['openaire3.0'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['openaire3.0'])
|
||||||
THEN
|
THEN
|
||||||
'openaire3.0@@@OpenAIRE 3.0 (OA, funding)@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'openaire3.0@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['openaire2.0_data'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['openaire2.0_data'])
|
||||||
THEN
|
THEN
|
||||||
'openaire2.0_data@@@OpenAIRE Data (funded, referenced datasets)@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'openaire2.0_data@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['native'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['native'])
|
||||||
THEN
|
THEN
|
||||||
'native@@@proprietary@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'native@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['hostedBy'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['hostedBy'])
|
||||||
THEN
|
THEN
|
||||||
'hostedBy@@@collected from a compatible aggregator@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'hostedBy@@@dnet:datasourceCompatibilityLevel'
|
||||||
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['notCompatible'])
|
WHEN (array_agg(DISTINCT COALESCE (a.compatibility_override, a.compatibility) :: TEXT) @> ARRAY ['notCompatible'])
|
||||||
THEN
|
THEN
|
||||||
'notCompatible@@@under validation@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'notCompatible@@@dnet:datasourceCompatibilityLevel'
|
||||||
ELSE
|
ELSE
|
||||||
'UNKNOWN@@@not available@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel'
|
'UNKNOWN@@@dnet:datasourceCompatibilityLevel'
|
||||||
END AS openairecompatibility,
|
END AS openairecompatibility,
|
||||||
d.websiteurl AS websiteurl,
|
d.websiteurl AS websiteurl,
|
||||||
d.logourl AS logourl,
|
d.logourl AS logourl,
|
||||||
|
@ -47,7 +47,7 @@ SELECT
|
||||||
NULL AS odnumberofitems,
|
NULL AS odnumberofitems,
|
||||||
NULL AS odnumberofitemsdate,
|
NULL AS odnumberofitemsdate,
|
||||||
|
|
||||||
(SELECT array_agg(s|| '###keywords@@@keywords@@@dnet:subject_classification_typologies@@@dnet:subject_classification_typologies')
|
(SELECT array_agg(s|| '###keywords@@@dnet:subject_classification_typologies')
|
||||||
FROM UNNEST(
|
FROM UNNEST(
|
||||||
ARRAY(
|
ARRAY(
|
||||||
SELECT trim(s)
|
SELECT trim(s)
|
||||||
|
@ -83,32 +83,9 @@ SELECT
|
||||||
ARRAY[]::text[] AS policies,
|
ARRAY[]::text[] AS policies,
|
||||||
dc.id AS collectedfromid,
|
dc.id AS collectedfromid,
|
||||||
dc.officialname AS collectedfromname,
|
dc.officialname AS collectedfromname,
|
||||||
d.typology || '@@@' || CASE
|
d.typology||'@@@dnet:datasource_typologies' AS datasourcetype,
|
||||||
WHEN (d.typology = 'crissystem') THEN 'CRIS System'
|
'sysimport:crosswalk:entityregistry@@@dnet:provenance_actions' AS provenanceaction,
|
||||||
WHEN (d.typology = 'datarepository::unknown') THEN 'Data Repository'
|
d.issn || ' @@@ ' || d.eissn || ' @@@ ' || d.lissn AS journal
|
||||||
WHEN (d.typology = 'aggregator::datarepository') THEN 'Data Repository Aggregator'
|
|
||||||
WHEN (d.typology = 'infospace') THEN 'Information Space'
|
|
||||||
WHEN (d.typology = 'pubsrepository::institutional') THEN 'Institutional Repository'
|
|
||||||
WHEN (d.typology = 'aggregator::pubsrepository::institutional') THEN 'Institutional Repository Aggregator'
|
|
||||||
WHEN (d.typology = 'pubsrepository::journal') THEN 'Journal'
|
|
||||||
WHEN (d.typology = 'aggregator::pubsrepository::journals') THEN 'Journal Aggregator/Publisher'
|
|
||||||
WHEN (d.typology = 'pubsrepository::mock') THEN 'Other'
|
|
||||||
WHEN (d.typology = 'pubscatalogue::unknown') THEN 'Publication Catalogue'
|
|
||||||
WHEN (d.typology = 'pubsrepository::unknown') THEN 'Publication Repository'
|
|
||||||
WHEN (d.typology = 'aggregator::pubsrepository::unknown') THEN 'Publication Repository Aggregator'
|
|
||||||
WHEN (d.typology = 'entityregistry') THEN 'Registry'
|
|
||||||
WHEN (d.typology = 'scholarcomminfra') THEN 'Scholarly Comm. Infrastructure'
|
|
||||||
WHEN (d.typology = 'pubsrepository::thematic') THEN 'Thematic Repository'
|
|
||||||
WHEN (d.typology = 'websource') THEN 'Web Source'
|
|
||||||
WHEN (d.typology = 'entityregistry::projects') THEN 'Funder database'
|
|
||||||
WHEN (d.typology = 'entityregistry::repositories') THEN 'Registry of repositories'
|
|
||||||
WHEN (d.typology = 'softwarerepository') THEN 'Software Repository'
|
|
||||||
WHEN (d.typology = 'aggregator::softwarerepository') THEN 'Software Repository Aggregator'
|
|
||||||
WHEN (d.typology = 'orprepository') THEN 'Repository'
|
|
||||||
ELSE 'Other'
|
|
||||||
END || '@@@dnet:datasource_typologies@@@dnet:datasource_typologies' AS datasourcetype,
|
|
||||||
'sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions' AS provenanceaction,
|
|
||||||
CONCAT(d.issn, ' @@@ ', d.eissn, ' @@@ ', d.lissn) AS journal
|
|
||||||
|
|
||||||
FROM dsm_datasources d
|
FROM dsm_datasources d
|
||||||
|
|
||||||
|
|
|
@ -22,13 +22,12 @@ SELECT
|
||||||
'' AS inferenceprovenance,
|
'' AS inferenceprovenance,
|
||||||
d.id AS collectedfromid,
|
d.id AS collectedfromid,
|
||||||
d.officialname AS collectedfromname,
|
d.officialname AS collectedfromname,
|
||||||
o.country || '@@@' || COALESCE(cntr.name,o.country) || '@@@dnet:countries@@@dnet:countries' AS country,
|
o.country || '@@@dnet:countries' AS country,
|
||||||
'sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions' AS provenanceaction,
|
'sysimport:crosswalk:entityregistry@@@dnet:provenance_actions' AS provenanceaction,
|
||||||
ARRAY[]::text[] AS pid
|
ARRAY[]::text[] AS pid
|
||||||
|
|
||||||
FROM dsm_organizations o
|
FROM dsm_organizations o
|
||||||
LEFT OUTER JOIN dsm_datasources d ON (d.id = o.collectedfrom)
|
LEFT OUTER JOIN dsm_datasources d ON (d.id = o.collectedfrom)
|
||||||
LEFT OUTER JOIN class cntr ON (cntr.code = o.country)
|
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
|
|
@ -11,8 +11,8 @@ SELECT
|
||||||
'' AS inferenceprovenance,
|
'' AS inferenceprovenance,
|
||||||
'openaire____::openorgs' AS collectedfromid,
|
'openaire____::openorgs' AS collectedfromid,
|
||||||
'OpenOrgs Database' AS collectedfromname,
|
'OpenOrgs Database' AS collectedfromname,
|
||||||
o.country || '@@@' || o.country || '@@@dnet:countries@@@dnet:countries' AS country,
|
o.country || '@@@dnet:countries' AS country,
|
||||||
'sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions' AS provenanceaction,
|
'sysimport:crosswalk:entityregistry@@@dnet:provenance_actions' AS provenanceaction,
|
||||||
array_agg(DISTINCT i.otherid || '###' || i.type || '@@@dnet:pid_types') AS pid
|
array_agg(DISTINCT i.otherid || '###' || i.type || '@@@dnet:pid_types') AS pid
|
||||||
FROM organizations o
|
FROM organizations o
|
||||||
LEFT OUTER JOIN acronyms a ON (a.id = o.id)
|
LEFT OUTER JOIN acronyms a ON (a.id = o.id)
|
||||||
|
@ -40,8 +40,8 @@ SELECT
|
||||||
'' AS inferenceprovenance,
|
'' AS inferenceprovenance,
|
||||||
'openaire____::openorgs' AS collectedfromid,
|
'openaire____::openorgs' AS collectedfromid,
|
||||||
'OpenOrgs Database' AS collectedfromname,
|
'OpenOrgs Database' AS collectedfromname,
|
||||||
o.country || '@@@' || o.country || '@@@dnet:countries@@@dnet:countries' AS country,
|
o.country || '@@@dnet:countries' AS country,
|
||||||
'sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions' AS provenanceaction,
|
'sysimport:crosswalk:entityregistry@@@dnet:provenance_actions' AS provenanceaction,
|
||||||
array_agg(DISTINCT i.otherid || '###' || i.type || '@@@dnet:pid_types') AS pid
|
array_agg(DISTINCT i.otherid || '###' || i.type || '@@@dnet:pid_types') AS pid
|
||||||
FROM other_names n
|
FROM other_names n
|
||||||
LEFT OUTER JOIN organizations o ON (n.id = o.id)
|
LEFT OUTER JOIN organizations o ON (n.id = o.id)
|
||||||
|
|
|
@ -11,8 +11,8 @@ SELECT
|
||||||
NULL AS inferenceprovenance,
|
NULL AS inferenceprovenance,
|
||||||
dc.id AS collectedfromid,
|
dc.id AS collectedfromid,
|
||||||
dc.officialname AS collectedfromname,
|
dc.officialname AS collectedfromname,
|
||||||
po.semanticclass || '@@@' || po.semanticclass || '@@@dnet:project_organization_relations@@@dnet:project_organization_relations' AS semantics,
|
po.semanticclass || '@@@dnet:project_organization_relations' AS semantics,
|
||||||
'sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions' AS provenanceaction
|
'sysimport:crosswalk:entityregistry@@@dnet:provenance_actions' AS provenanceaction
|
||||||
|
|
||||||
FROM project_organization po
|
FROM project_organization po
|
||||||
LEFT OUTER JOIN projects p ON (p.id = po.project)
|
LEFT OUTER JOIN projects p ON (p.id = po.project)
|
||||||
|
|
|
@ -31,17 +31,14 @@ SELECT
|
||||||
p.fundedamount AS fundedamount,
|
p.fundedamount AS fundedamount,
|
||||||
dc.id AS collectedfromid,
|
dc.id AS collectedfromid,
|
||||||
dc.officialname AS collectedfromname,
|
dc.officialname AS collectedfromname,
|
||||||
p.contracttype || '@@@' || p.contracttypename || '@@@' || p.contracttypescheme || '@@@' || p.contracttypescheme AS contracttype,
|
p.contracttype || '@@@' || p.contracttypescheme AS contracttype,
|
||||||
pac.code || '@@@' || pac.name || '@@@' || pas.code || '@@@' || pas.name AS provenanceaction,
|
p.provenanceactionclass || '@@@' || p.provenanceactionscheme AS provenanceaction,
|
||||||
array_agg(DISTINCT i.pid || '###' || i.issuertype) AS pid,
|
array_agg(DISTINCT i.pid || '###' || i.issuertype) AS pid,
|
||||||
array_agg(DISTINCT s.name || '###' || sc.code || '@@@' || sc.name || '@@@' || ss.code || '@@@' || ss.name) AS subjects,
|
array_agg(DISTINCT s.name || '###' || s.semanticclass || '@@@' || s.semanticscheme) AS subjects,
|
||||||
array_agg(DISTINCT fp.path) AS fundingtree
|
array_agg(DISTINCT fp.path) AS fundingtree
|
||||||
|
|
||||||
FROM projects p
|
FROM projects p
|
||||||
|
|
||||||
LEFT OUTER JOIN class pac ON (pac.code = p.provenanceactionclass)
|
|
||||||
LEFT OUTER JOIN scheme pas ON (pas.code = p.provenanceactionscheme)
|
|
||||||
|
|
||||||
LEFT OUTER JOIN projectpids pp ON (pp.project = p.id)
|
LEFT OUTER JOIN projectpids pp ON (pp.project = p.id)
|
||||||
LEFT OUTER JOIN dsm_identities i ON (i.pid = pp.pid)
|
LEFT OUTER JOIN dsm_identities i ON (i.pid = pp.pid)
|
||||||
|
|
||||||
|
@ -53,9 +50,6 @@ SELECT
|
||||||
LEFT OUTER JOIN project_subject ps ON (ps.project = p.id)
|
LEFT OUTER JOIN project_subject ps ON (ps.project = p.id)
|
||||||
LEFT OUTER JOIN subjects s ON (s.id = ps.subject)
|
LEFT OUTER JOIN subjects s ON (s.id = ps.subject)
|
||||||
|
|
||||||
LEFT OUTER JOIN class sc ON (sc.code = s.semanticclass)
|
|
||||||
LEFT OUTER JOIN scheme ss ON (ss.code = s.semanticscheme)
|
|
||||||
|
|
||||||
GROUP BY
|
GROUP BY
|
||||||
p.id,
|
p.id,
|
||||||
p.code,
|
p.code,
|
||||||
|
@ -85,5 +79,6 @@ SELECT
|
||||||
p.fundedamount,
|
p.fundedamount,
|
||||||
dc.id,
|
dc.id,
|
||||||
dc.officialname,
|
dc.officialname,
|
||||||
pac.code, pac.name, pas.code, pas.name,
|
p.contracttype,
|
||||||
p.contracttype , p.contracttypename, p.contracttypescheme;
|
p.contracttypescheme;
|
||||||
|
|
|
@ -28,18 +28,15 @@ SELECT
|
||||||
p.summary AS summary,
|
p.summary AS summary,
|
||||||
p.currency AS currency,
|
p.currency AS currency,
|
||||||
p.totalcost AS totalcost,
|
p.totalcost AS totalcost,
|
||||||
p.fundedamount AS fundedamount,
|
p.fundedamount AS fundedamount,
|
||||||
dc.id AS collectedfromid,
|
dc.id AS collectedfromid,
|
||||||
dc.officialname AS collectedfromname,
|
dc.officialname AS collectedfromname,
|
||||||
ctc.code || '@@@' || ctc.name || '@@@' || cts.code || '@@@' || cts.name AS contracttype,
|
p.contracttypeclass || '@@@' || p.contracttypescheme AS contracttype,
|
||||||
pac.code || '@@@' || pac.name || '@@@' || pas.code || '@@@' || pas.name AS provenanceaction,
|
p.provenanceactionclass || '@@@' || p.provenanceactionscheme AS provenanceaction,
|
||||||
array_agg(DISTINCT i.pid || '###' || i.issuertype) AS pid,
|
array_agg(DISTINCT i.pid || '###' || i.issuertype) AS pid,
|
||||||
array_agg(DISTINCT s.name || '###' || sc.code || '@@@' || sc.name || '@@@' || ss.code || '@@@' || ss.name) AS subjects,
|
array_agg(DISTINCT s.name || '###' || s.semanticclass || '@@@' || s.semanticscheme) AS subjects,
|
||||||
array_agg(DISTINCT fp.path) AS fundingtree
|
array_agg(DISTINCT fp.path) AS fundingtree
|
||||||
FROM projects p
|
FROM projects p
|
||||||
LEFT OUTER JOIN class pac ON (pac.code = p.provenanceactionclass)
|
|
||||||
LEFT OUTER JOIN scheme pas ON (pas.code = p.provenanceactionscheme)
|
|
||||||
|
|
||||||
LEFT OUTER JOIN projectpids pp ON (pp.project = p.id)
|
LEFT OUTER JOIN projectpids pp ON (pp.project = p.id)
|
||||||
LEFT OUTER JOIN dsm_identities i ON (i.pid = pp.pid)
|
LEFT OUTER JOIN dsm_identities i ON (i.pid = pp.pid)
|
||||||
|
|
||||||
|
@ -51,12 +48,6 @@ SELECT
|
||||||
LEFT OUTER JOIN project_subject ps ON (ps.project = p.id)
|
LEFT OUTER JOIN project_subject ps ON (ps.project = p.id)
|
||||||
LEFT OUTER JOIN subjects s ON (s.id = ps.subject)
|
LEFT OUTER JOIN subjects s ON (s.id = ps.subject)
|
||||||
|
|
||||||
LEFT OUTER JOIN class sc ON (sc.code = s.semanticclass)
|
|
||||||
LEFT OUTER JOIN scheme ss ON (ss.code = s.semanticscheme)
|
|
||||||
|
|
||||||
LEFT OUTER JOIN class ctc ON (ctc.code = p.contracttypeclass)
|
|
||||||
LEFT OUTER JOIN scheme cts ON (cts.code = p.contracttypescheme)
|
|
||||||
|
|
||||||
GROUP BY
|
GROUP BY
|
||||||
p.id,
|
p.id,
|
||||||
p.code,
|
p.code,
|
||||||
|
@ -85,6 +76,6 @@ SELECT
|
||||||
p.totalcost,
|
p.totalcost,
|
||||||
p.fundedamount,
|
p.fundedamount,
|
||||||
dc.id,
|
dc.id,
|
||||||
dc.officialname,
|
dc.officialname
|
||||||
pac.code, pac.name, pas.code, pas.name,
|
|
||||||
ctc.code, ctc.name, cts.code, cts.name;
|
|
|
@ -4,6 +4,8 @@ package eu.dnetlib.dhp.oa.graph.raw;
|
||||||
import static org.junit.jupiter.api.Assertions.assertEquals;
|
import static org.junit.jupiter.api.Assertions.assertEquals;
|
||||||
import static org.junit.jupiter.api.Assertions.assertNotNull;
|
import static org.junit.jupiter.api.Assertions.assertNotNull;
|
||||||
import static org.junit.jupiter.api.Assertions.assertTrue;
|
import static org.junit.jupiter.api.Assertions.assertTrue;
|
||||||
|
import static org.mockito.ArgumentMatchers.anyString;
|
||||||
|
import static org.mockito.Mockito.lenient;
|
||||||
|
|
||||||
import java.io.IOException;
|
import java.io.IOException;
|
||||||
import java.sql.Array;
|
import java.sql.Array;
|
||||||
|
@ -25,6 +27,8 @@ import org.mockito.junit.jupiter.MockitoExtension;
|
||||||
import com.fasterxml.jackson.core.type.TypeReference;
|
import com.fasterxml.jackson.core.type.TypeReference;
|
||||||
import com.fasterxml.jackson.databind.ObjectMapper;
|
import com.fasterxml.jackson.databind.ObjectMapper;
|
||||||
|
|
||||||
|
import eu.dnetlib.dhp.oa.graph.raw.common.OafMapperUtils;
|
||||||
|
import eu.dnetlib.dhp.oa.graph.raw.common.VocabularyGroup;
|
||||||
import eu.dnetlib.dhp.schema.oaf.Datasource;
|
import eu.dnetlib.dhp.schema.oaf.Datasource;
|
||||||
import eu.dnetlib.dhp.schema.oaf.Oaf;
|
import eu.dnetlib.dhp.schema.oaf.Oaf;
|
||||||
import eu.dnetlib.dhp.schema.oaf.Organization;
|
import eu.dnetlib.dhp.schema.oaf.Organization;
|
||||||
|
@ -40,9 +44,22 @@ public class MigrateDbEntitiesApplicationTest {
|
||||||
@Mock
|
@Mock
|
||||||
private ResultSet rs;
|
private ResultSet rs;
|
||||||
|
|
||||||
|
@Mock
|
||||||
|
private VocabularyGroup vocs;
|
||||||
|
|
||||||
@BeforeEach
|
@BeforeEach
|
||||||
public void setUp() {
|
public void setUp() {
|
||||||
this.app = new MigrateDbEntitiesApplication();
|
lenient()
|
||||||
|
.when(vocs.getTermAsQualifier(anyString(), anyString()))
|
||||||
|
.thenAnswer(
|
||||||
|
invocation -> OafMapperUtils
|
||||||
|
.qualifier(
|
||||||
|
invocation.getArgument(1), invocation.getArgument(1), invocation.getArgument(0),
|
||||||
|
invocation.getArgument(0)));
|
||||||
|
|
||||||
|
lenient().when(vocs.termExists(anyString(), anyString())).thenReturn(true);
|
||||||
|
|
||||||
|
this.app = new MigrateDbEntitiesApplication(vocs);
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
|
@ -61,8 +78,7 @@ public class MigrateDbEntitiesApplicationTest {
|
||||||
assertEquals(ds.getContactemail().getValue(), getValueAsString("contactemail", fields));
|
assertEquals(ds.getContactemail().getValue(), getValueAsString("contactemail", fields));
|
||||||
assertEquals(ds.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
|
assertEquals(ds.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
|
||||||
assertEquals(ds.getNamespaceprefix().getValue(), getValueAsString("namespaceprefix", fields));
|
assertEquals(ds.getNamespaceprefix().getValue(), getValueAsString("namespaceprefix", fields));
|
||||||
assertEquals(
|
assertEquals(ds.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
|
||||||
ds.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
|
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
|
@ -78,8 +94,7 @@ public class MigrateDbEntitiesApplicationTest {
|
||||||
assertValidId(p.getCollectedfrom().get(0).getKey());
|
assertValidId(p.getCollectedfrom().get(0).getKey());
|
||||||
assertEquals(p.getAcronym().getValue(), getValueAsString("acronym", fields));
|
assertEquals(p.getAcronym().getValue(), getValueAsString("acronym", fields));
|
||||||
assertEquals(p.getTitle().getValue(), getValueAsString("title", fields));
|
assertEquals(p.getTitle().getValue(), getValueAsString("title", fields));
|
||||||
assertEquals(
|
assertEquals(p.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
|
||||||
p.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
|
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
|
@ -99,13 +114,10 @@ public class MigrateDbEntitiesApplicationTest {
|
||||||
assertEquals(o.getLegalname().getValue(), getValueAsString("legalname", fields));
|
assertEquals(o.getLegalname().getValue(), getValueAsString("legalname", fields));
|
||||||
assertEquals(o.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
|
assertEquals(o.getWebsiteurl().getValue(), getValueAsString("websiteurl", fields));
|
||||||
assertEquals(o.getCountry().getClassid(), getValueAsString("country", fields).split("@@@")[0]);
|
assertEquals(o.getCountry().getClassid(), getValueAsString("country", fields).split("@@@")[0]);
|
||||||
assertEquals(
|
assertEquals(o.getCountry().getClassname(), getValueAsString("country", fields).split("@@@")[0]);
|
||||||
o.getCountry().getClassname(), getValueAsString("country", fields).split("@@@")[1]);
|
assertEquals(o.getCountry().getSchemeid(), getValueAsString("country", fields).split("@@@")[1]);
|
||||||
assertEquals(o.getCountry().getSchemeid(), getValueAsString("country", fields).split("@@@")[2]);
|
assertEquals(o.getCountry().getSchemename(), getValueAsString("country", fields).split("@@@")[1]);
|
||||||
assertEquals(
|
assertEquals(o.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
|
||||||
o.getCountry().getSchemename(), getValueAsString("country", fields).split("@@@")[3]);
|
|
||||||
assertEquals(
|
|
||||||
o.getCollectedfrom().get(0).getValue(), getValueAsString("collectedfromname", fields));
|
|
||||||
}
|
}
|
||||||
|
|
||||||
@Test
|
@Test
|
||||||
|
|
|
@ -52,7 +52,7 @@
|
||||||
{
|
{
|
||||||
"field": "semantics",
|
"field": "semantics",
|
||||||
"type": "not_used",
|
"type": "not_used",
|
||||||
"value": "providedBy@@@provided by@@@dnet:datasources_organizations_typologies@@@dnet:datasources_organizations_typologies"
|
"value": "providedBy@@@dnet:datasources_organizations_typologies"
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"field": "provenanceaction",
|
"field": "provenanceaction",
|
||||||
|
|
|
@ -30,7 +30,7 @@
|
||||||
{
|
{
|
||||||
"field": "openairecompatibility",
|
"field": "openairecompatibility",
|
||||||
"type": "string",
|
"type": "string",
|
||||||
"value": "hostedBy@@@collected from a compatible aggregator@@@dnet:datasourceCompatibilityLevel@@@dnet:datasourceCompatibilityLevel"
|
"value": "hostedBy@@@dnet:datasourceCompatibilityLevel"
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"field": "websiteurl",
|
"field": "websiteurl",
|
||||||
|
@ -219,16 +219,16 @@
|
||||||
{
|
{
|
||||||
"field": "datasourcetype",
|
"field": "datasourcetype",
|
||||||
"type": "string",
|
"type": "string",
|
||||||
"value": "pubsrepository::journal@@@Journal@@@dnet:datasource_typologies@@@dnet:datasource_typologies"
|
"value": "pubsrepository::journal@@@dnet:datasource_typologies"
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"field": "provenanceaction",
|
"field": "provenanceaction",
|
||||||
"type": "not_used",
|
"type": "not_used",
|
||||||
"value": "sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions"
|
"value": "sysimport:crosswalk:entityregistry@@@dnet:provenance_actions"
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"field": "journal",
|
"field": "journal",
|
||||||
"type": "string",
|
"type": "string",
|
||||||
"value": "2579-5449@@@2597-6540@@@"
|
"value": "2579-5449 @@@ 2597-6540 @@@ "
|
||||||
}
|
}
|
||||||
]
|
]
|
||||||
|
|
|
@ -117,11 +117,11 @@
|
||||||
{
|
{
|
||||||
"field": "country",
|
"field": "country",
|
||||||
"type": "string",
|
"type": "string",
|
||||||
"value": "US@@@US@@@dnet:countries@@@dnet:countries"
|
"value": "US@@@dnet:countries"
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"field": "provenanceaction",
|
"field": "provenanceaction",
|
||||||
"type": "not_used",
|
"type": "not_used",
|
||||||
"value": "sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions"
|
"value": "sysimport:crosswalk:entityregistry@@@dnet:provenance_actions"
|
||||||
}
|
}
|
||||||
]
|
]
|
|
@ -62,11 +62,11 @@
|
||||||
{
|
{
|
||||||
"field": "semantics",
|
"field": "semantics",
|
||||||
"type": "not_used",
|
"type": "not_used",
|
||||||
"value": "coordinator@@@coordinator@@@dnet:project_organization_relations@@@dnet:project_organization_relations"
|
"value": "coordinator@@@dnet:project_organization_relations"
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"field": "provenanceaction",
|
"field": "provenanceaction",
|
||||||
"type": "not_used",
|
"type": "not_used",
|
||||||
"value": "sysimport:crosswalk:entityregistry@@@sysimport:crosswalk:entityregistry@@@dnet:provenance_actions@@@dnet:provenance_actions"
|
"value": "sysimport:crosswalk:entityregistry@@@dnet:provenance_actions"
|
||||||
}
|
}
|
||||||
]
|
]
|
|
@ -167,7 +167,7 @@
|
||||||
{
|
{
|
||||||
"field": "provenanceaction",
|
"field": "provenanceaction",
|
||||||
"type": "not_used",
|
"type": "not_used",
|
||||||
"value": "sysimport:crosswalk:entityregistry@@@Harvested@@@dnet:provenanceActions@@@dnet:provenanceActions"
|
"value": "sysimport:crosswalk:entityregistry@@@dnet:provenanceActions"
|
||||||
},
|
},
|
||||||
{
|
{
|
||||||
"field": "pid",
|
"field": "pid",
|
||||||
|
|
Loading…
Reference in New Issue