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merge upstream

This commit is contained in:
Miriam Baglioni 2021-02-08 10:33:11 +01:00
parent 6190465851 c67329d3ad
commit 2f5e6647c6
3 changed files with 398 additions and 0 deletions
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29
dhp-workflows/dhp-graph-mapper/src/test/java/eu/dnetlib/dhp/oa/graph/raw/MappersTest.java
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@ -19,6 +19,7 @@ import org.junit.jupiter.api.extension.ExtendWith;
import org.mockito.Mock; import org.mockito.Mock;
import org.mockito.junit.jupiter.MockitoExtension; import org.mockito.junit.jupiter.MockitoExtension;
import com.fasterxml.jackson.core.JsonProcessingException;
import com.fasterxml.jackson.databind.ObjectMapper; import com.fasterxml.jackson.databind.ObjectMapper;
import eu.dnetlib.dhp.oa.graph.clean.CleaningFunctionTest; import eu.dnetlib.dhp.oa.graph.clean.CleaningFunctionTest;
@ -406,6 +407,34 @@ public class MappersTest {
System.out.println(p.getTitle().get(0).getValue()); System.out.println(p.getTitle().get(0).getValue());
} }
@Test
void testEUOpenDataPortal() throws IOException {
final String xml = IOUtils.toString(getClass().getResourceAsStream("eu_odp.xml"));
final List<Oaf> list = new OdfToOafMapper(vocs, false).processMdRecord(xml);
System.out.println("***************");
System.out.println(new ObjectMapper().writeValueAsString(list));
System.out.println("***************");
final Dataset p = (Dataset) list.get(0);
assertValidId(p.getId());
assertValidId(p.getCollectedfrom().get(0).getKey());
assertTrue(StringUtils.isNotBlank(p.getTitle().get(0).getValue()));
assertEquals(0, p.getAuthor().size());
assertEquals(1, p.getPid().size());
assertEquals("OPEN", p.getBestaccessright().getClassid());
assertEquals("dataset", p.getResulttype().getClassname());
assertEquals(1, p.getInstance().size());
assertEquals("OPEN", p.getInstance().get(0).getAccessright().getClassid());
assertValidId(p.getInstance().get(0).getCollectedfrom().getKey());
assertValidId(p.getInstance().get(0).getHostedby().getKey());
assertEquals(
"CC_BY_4_0", p.getInstance().get(0).getLicense().getValue());
assertEquals(1, p.getInstance().get(0).getUrl().size());
assertEquals(1, p.getInstance().size());
System.out.println(p.getInstance().get(0).getUrl().get(0));
System.out.println(p.getInstance().get(0).getHostedby().getValue());
}
private void assertValidId(final String id) { private void assertValidId(final String id) {
assertEquals(49, id.length()); assertEquals(49, id.length());
assertEquals('|', id.charAt(2)); assertEquals('|', id.charAt(2));

1
dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/clean/terms.txt
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@ -1047,6 +1047,7 @@ dnet:pid_types @=@ dnet:pid_types @=@ urn @=@ urn
dnet:pid_types @=@ dnet:pid_types @=@ who @=@ WHO Identifier dnet:pid_types @=@ dnet:pid_types @=@ who @=@ WHO Identifier
dnet:pid_types @=@ dnet:pid_types @=@ drks @=@ DRKS Identifier dnet:pid_types @=@ dnet:pid_types @=@ drks @=@ DRKS Identifier
dnet:pid_types @=@ dnet:pid_types @=@ handle @=@ Handle dnet:pid_types @=@ dnet:pid_types @=@ handle @=@ Handle
dnet:pid_types @=@ dnet:pid_types @=@ data.europa.eu @=@ EU Persistent URL
dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/ACM @=@ An ACM classification term that can be associated to your publications dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/ACM @=@ An ACM classification term that can be associated to your publications
dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/ARXIV @=@ An ARXIV classification term that can be associated to your publications dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/ARXIV @=@ An ARXIV classification term that can be associated to your publications
dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/DDC @=@ A Dewey Decimal classification term (DDC) that can be associated to your publications dnet:topic_types @=@ dnet:topic_types @=@ ENRICH/MISSING/SUBJECT/DDC @=@ A Dewey Decimal classification term (DDC) that can be associated to your publications

368
dhp-workflows/dhp-graph-mapper/src/test/resources/eu/dnetlib/dhp/oa/graph/raw/eu_odp.xml Normal file
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@ -0,0 +1,368 @@
<?xml version="1.0" encoding="UTF-8"?>
<oai:record xmlns:dr="http://www.driver-repository.eu/namespace/dr"
xmlns:dri="http://www.driver-repository.eu/namespace/dri"
xmlns:oaf="http://namespace.openaire.eu/oaf" xmlns:oai="http://www.openarchives.org/OAI/2.0/">
<oai:header>
<dri:objIdentifier>r3c4b2081b22::0007d64b38bb2b399120f9993f95d911</dri:objIdentifier>
<dri:recordIdentifier>60a0a5b0-b63c-473f-b8bc-207ea037eb3b</dri:recordIdentifier>
<dri:dateOfCollection>2021-01-28T17:24:33.095+01:00</dri:dateOfCollection>
<oaf:datasourceprefix>r3c4b2081b22</oaf:datasourceprefix>
<dr:dateOfTransformation>2021-02-03T16:57:03.099+01:00</dr:dateOfTransformation>
</oai:header>
<oai:metadata>
<datacite:resource
xmlns:datacite="http://datacite.org/schema/kernel-4"
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://datacite.org/schema/kernel-4 http://schema.datacite.org/meta/kernel-4/metadata.xsd">
<datacite:identifier identifierType="URL">http://data.europa.eu/88u/dataset/60a0a5b0-b63c-473f-b8bc-207ea037eb3b</datacite:identifier>
<datacite:creators/>
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<datacite:title xml:lang="en">GMIS - Favourable feeding habitat of adult Atlantic bluefin tuna (ABFT) Monthly 1998-2017 (frequency of occurence, %)</datacite:title>
</datacite:titles>
<datacite:publisher>JRC</datacite:publisher>
<datacite:publicationYear>2019</datacite:publicationYear>
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<datacite:date dateType="Issued">2019-07-09</datacite:date>
</datacite:dates>
<datacite:resourceType resourceTypeGeneral="Dataset">Dataset</datacite:resourceType>
<datacite:descriptions>
<datacite:description descriptionType="Abstract" xml:lang="en">The favourable feeding habitat of the Atlantic bluefin tuna is daily identified linking their ecological traits with environmental variables from satellite remote sensing and physical ocean models. The feeding habitat is mostly related to the occurrence of productive oceanic features (such as eddies) that are detected by satellite sensors of ocean colour (chlorophyll-a fronts). The physical variables used are sea surface temperature and sea surface height anomaly. More information: https://fishreg.jrc.ec.europa.eu/fish-habitat, Peer-reviewed publication: http://www.sciencedirect.com/science/article/pii/S0079661116000070</datacite:description>
</datacite:descriptions>
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<datacite:subject>protected area</datacite:subject>
<datacite:subject>environmental monitoring</datacite:subject>
<datacite:subject>oceanography</datacite:subject>
<datacite:subject>ocean</datacite:subject>
<datacite:subject>Environmental Monitoring Facilities</datacite:subject>
<datacite:subject>Environment</datacite:subject>
<datacite:subject>Protected Sites</datacite:subject>
<datacite:subject>Oceanographic Geographical Features</datacite:subject>
<datacite:subject>environmental data</datacite:subject>
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