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Author SHA1 Message Date
Claudio Atzori 488d9a5eaa [graph cleaning] WIP: refactoring of the cleaning stages, unit tests 2023-03-23 10:41:13 +01:00
dimitrispie fad7fa4af8 Added Technological University Dublin 2023-03-22 09:44:00 +02:00
Claudio Atzori 4f5ba0ed52 [graph cleaning] WIP: refactoring of the cleaning stages, unit tests 2023-03-21 14:41:20 +01:00
Claudio Atzori 6d3d18d8b5 [graph cleaning] WIP: refactoring of the cleaning stages 2023-03-16 17:23:36 +01:00
dimitrispie 43b23a9bf3 Update step20-createMonitorDB.sql 
Added Technological University Dublin
 2023-03-15 09:57:12 +02:00
Claudio Atzori 518618f1a9 [graph cleaning] avoid to overwrite the subject class to 'keyword' for those with provenance 'subject:fos' 2023-03-14 15:22:47 +01:00
Claudio Atzori 41e00bcd07 [graph provision] avoid to parse again the XML records, apparently the escaped XML characters get unescaped invalidating the record 2023-03-13 15:19:49 +01:00
Claudio Atzori 24e2fd828b code formatting 2023-03-08 21:17:08 +01:00
Claudio Atzori e28d395e87 [aggregator graph] using dedicated path to sync claims, adjusted paths with wildcards 2023-03-08 21:16:52 +01:00
Claudio Atzori 5b8fd37314 [aggregator graph] using dedicated path to sync claims 2023-03-08 15:28:14 +01:00
Claudio Atzori 7fd89566c2 [aggregator graph] handle paths including wildcards 2023-03-08 12:43:00 +01:00
Miriam Baglioni 588aca5ce4 Merge pull request 'h2020classification' (#280) from h2020classification into beta 
Reviewed-on: D-Net/dnet-hadoop#280
 2023-03-03 09:29:10 +01:00
Claudio Atzori 8ec0d62d91 pre-group the records in each table before joning the contents from BETA and PROD together 2023-03-02 14:49:19 +01:00
Miriam Baglioni 0fff98a14c [ECclassification] removed print 2023-03-02 11:46:57 +01:00
Miriam Baglioni b0c2f7e526 [ECclassification] removed not needed resources 2023-03-02 11:44:48 +01:00
Miriam Baglioni d4fc62c2f6 mergin with branch beta 2023-03-02 11:14:54 +01:00
Miriam Baglioni de8ad1caef [ECclassification] new implementation for the H2020 classification 2023-03-02 11:14:03 +01:00
Claudio Atzori db9dad4aa7 [actionmanager] increased spark.sql.shuffle.partitions for publication, dataset, relation records 2023-03-02 09:11:37 +01:00
Miriam Baglioni c1f9848953 [ECclassification] added new classes 2023-03-01 15:29:11 +01:00
Claudio Atzori 6f488547a7 ignore non processable records 2023-03-01 14:49:51 +01:00
Claudio Atzori 7d263f265e adjusted logs 2023-03-01 11:58:07 +01:00
Claudio Atzori 16ad42e8f3 code formatting 2023-03-01 10:22:13 +01:00
Claudio Atzori 9c59dac859 followup changes reorganising the mdstore synchronisation mechanism 2023-03-01 10:16:20 +01:00
Miriam Baglioni ad745c0aa3 [CrossrefFunderMapping] fixed issueson funder name 2023-02-28 14:58:27 +01:00
Miriam Baglioni 4f2df876cd [ECclassification] new implementation first try 2023-02-28 14:44:00 +01:00
Claudio Atzori 2f7346e9cf WIP monodirectional citations, Datacite 2023-02-28 13:30:51 +01:00
Claudio Atzori 0559d8b412 WIP monodirectional citations 2023-02-28 10:57:32 +01:00
Sandro La Bruzzo 69fa616490 removed wrong content 2023-02-28 10:27:38 +01:00
Sandro La Bruzzo 832a75d012 added mapping for crossref funder 2023-02-28 10:16:34 +01:00
Sandro La Bruzzo 78e51c182a Added missing parametero to raw all workflow 2023-02-28 10:16:01 +01:00
Claudio Atzori 7aebedb43c code formatting 2023-02-27 11:51:27 +01:00
Miriam Baglioni 80987801d7 [FoS] added check for null on level1 subject 2023-02-27 11:40:22 +01:00
Claudio Atzori 31e97c2a6b [unresolved entities] updated oozie wf node labels 2023-02-27 11:38:29 +01:00
Miriam Baglioni 23112929e9 [FoS] changed the default separator from comma to tab to solve the issue in subject value split 2023-02-27 10:18:39 +01:00
Serafeim Chatzopoulos 0b5bf53b45 Remove unecessary indexed fields from Solr 2023-02-23 12:42:42 +02:00
dimitrispie 1547611246 Merge branch 'beta' into hive 2023-02-22 16:57:12 +02:00
Michele Artini fddcf701e9 updated the order of the compatibilities 2023-02-22 12:07:09 +01:00
Claudio Atzori 0c1be41b30 code formatting 2023-02-22 10:15:25 +01:00
Claudio Atzori 99cd7761aa cleanup of non necessary dhp-monitor-update workflow 2023-02-22 10:10:22 +01:00
Claudio Atzori cd3a51a15f Merge branch 'beta' into 8232-mdstore-synch-improve 2023-02-22 09:57:07 +01:00
Claudio Atzori 477a7c416f Merge branch 'beta' into UsageCountOnProjectAndDatasource 2023-02-22 09:55:51 +01:00
Claudio Atzori c20c1c9159 Merge pull request 'Added 4 institutions:' (#261) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#261
 2023-02-22 09:53:45 +01:00
Miriam Baglioni d617c3e812 [DOIBoost] extended mapping for funder #8407 2023-02-20 14:45:27 +01:00
dimitrispie 90807b60c7 Changes to monitor wf 2023-02-20 10:42:24 +02:00
dimitrispie d2f9ccf934 Changes to separate monitor wf 2023-02-20 10:41:21 +02:00
dimitrispie 032a401cbf Bug fixes 2023-02-20 09:29:20 +02:00
Miriam Baglioni 016337a0f9 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2023-02-16 15:54:59 +01:00
Sandro La Bruzzo 118c1fc3b3 Merge remote-tracking branch 'origin/beta' into beta 2023-02-15 10:29:28 +01:00
Sandro La Bruzzo a8ac79fa25 Added citation relation on crossref Mapping 2023-02-15 10:29:13 +01:00
dimitrispie 595192d510 Bug fix 2023-02-14 16:24:08 +02:00
dimitrispie f3aaff3688 Remove duplicate orgs 2023-02-14 09:48:36 +02:00
Claudio Atzori 9a03f71db1 code formatting 2023-02-13 16:25:47 +01:00
Michele Artini 554df257ab null values in date range conditions 2023-02-13 16:15:32 +01:00
dimitrispie 3400133c2f Bug fix 2023-02-13 09:44:00 +02:00
dimitrispie 935db0ab25 Added organizations for Monitor 2023-02-13 09:29:09 +02:00
dimitrispie 7b78b15c81 Changes for copying to Impala Cluster 2023-02-13 09:27:00 +02:00
Miriam Baglioni 5cf902a2b0 [UsageCount] changed query to make the sum be computed via sql instead of grouping 2023-02-10 16:16:37 +01:00
Miriam Baglioni f803530df6 [UsageCount] fixed query 2023-02-10 15:50:56 +01:00
Miriam Baglioni bb5bba51b3 [UsageCount] extended test 2023-02-09 19:08:30 +01:00
Miriam Baglioni 85e53fad00 [UsageCount] addition of usagecount for Projects and datasources. Extention of the action set created for the results with new entities for projects and datasources. Extention of the resource set and modification of the testing class 2023-02-09 18:59:45 +01:00
dimitrispie d71f5672d3 Add monitor post step 2023-02-09 13:44:14 +02:00
dimitrispie 35ba8bb328 Bug fixes 2023-02-09 12:57:57 +02:00
Sandro La Bruzzo 8920932dd8 Code formatted 2023-02-08 11:34:18 +01:00
Sandro La Bruzzo 0b9819f1ab Code formatted 2023-02-08 10:32:33 +01:00
Sandro La Bruzzo 6c81a161d2 Merge remote-tracking branch 'origin/beta' into 8231-mdstore-synch-improve 2023-02-08 10:29:09 +01:00
dimitrispie 3ba11d64a1 Changes 07022023 2023-02-07 12:53:51 +02:00
dimitrispie 98c34263ed Update step20-createMonitorDB.sql 
Add University of Cape Town organization
 2023-02-07 08:14:48 +02:00
dimitrispie 2dc6d47270 Changes 06022023 2023-02-06 13:18:53 +02:00
dimitrispie 973d78a4d6 Update step15_5.sql 
Added unpaywalls open access colors
 2023-02-02 08:03:54 +02:00
Claudio Atzori d05ca53a14 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2023-01-31 14:39:53 +01:00
Miriam Baglioni e82e009b46 added missing close tag for XML produced by the xquery to get information for the community from the IS 2023-01-31 10:19:34 +01:00
Miriam Baglioni b254a0375f [Affiliation from institutionalrepo] changed the field to check to verify the datasource type. Now it is in the field jurisdiction 2023-01-26 16:51:20 +01:00
dimitrispie cf58e4a5e4 Added Arts et Métiers ParisTech 2023-01-25 16:03:16 +02:00
dimitrispie db7d625ba9 Addedd Arts et Métiers ParisTech organization 2023-01-25 12:22:21 +02:00
Claudio Atzori 505867bce9 [bulk tagging] better node naming 2023-01-20 16:13:16 +01:00
Miriam Baglioni ecd398fe51 refactoring 2023-01-20 14:23:45 +01:00
Miriam Baglioni 0a5c6010b0 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2023-01-13 16:14:46 +01:00
dimitrispie 4d7553c9f1 Bug fixes 2023-01-12 17:19:19 +02:00
dimitrispie dd70c32ad7 Bug fixes 2023-01-12 17:18:05 +02:00
dimitrispie 51f7ab5864 Bug fixes 2023-01-12 17:15:06 +02:00
dimitrispie 34d4bf727c Bug fixes 2023-01-12 11:28:37 +02:00
dimitrispie 43f6d4f296 -Monitor DB workflow 2023-01-12 11:26:47 +02:00
dimitrispie 686580a220 - New Monitor DB workflow 
- New Organization added
 2023-01-12 11:18:03 +02:00
Claudio Atzori 0a58bc7ba7 [broker] prevent NPEs 2023-01-11 14:44:14 +01:00
Claudio Atzori 04cb96001c [broker] d40e20f437 adapted to the beta graph model 2023-01-11 10:10:12 +01:00
Michele Artini 91b845f611 Considering instance pids and alteternative identifiers 2023-01-11 09:58:54 +01:00
Miriam Baglioni 1f367122e4 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2023-01-11 09:47:44 +01:00
Michele Artini 7b7520850b fixed an invalid char 2023-01-11 09:22:18 +01:00
Miriam Baglioni d6895f0387 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2023-01-09 17:28:38 +01:00
dimitrispie becb242c17 Monitor DB only Workflow 2023-01-04 16:50:29 +02:00
dimitrispie dcb958e146 Changes to execute the stats wf only in hive 2023-01-04 11:39:01 +02:00
dimitrispie 592013d5dd Added more steps in decision node 2022-12-23 09:43:16 +02:00
dimitrispie 2a4bf32d4c Merge branch 'hive' of https://code-repo.d4science.org/antonis.lempesis/dnet-hadoop into hive 
# Conflicts:
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step10.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step13.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step14.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step16_1-definitions.sql
#	dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step7.sql
 2022-12-22 10:22:46 +02:00
dimitrispie 6449ff4207 1. Added a decision node to enables the workflow to make a selection on the execution path to follow 
2. Added new organization
3. Added 5 new tables from Eurostast
 2022-12-22 10:18:21 +02:00
Miriam Baglioni 8893389895 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2022-12-21 12:42:27 +01:00
Antonis Lempesis c8309fe18e addded command line params to allow hive actions to run 2022-12-21 12:41:33 +02:00
Antonis Lempesis 028873cc51 added new hive opts 2022-12-21 12:41:33 +02:00
Antonis Lempesis 1ddea4f442 removed 'stored as parquet' from views.. 2022-12-21 12:41:33 +02:00
Antonis Lempesis 2754c3dd62 moving data to impala cluster and creating shadow databases there 2022-12-21 12:41:29 +02:00
Antonis Lempesis 778a1a724f finished migration to hive only 2022-12-21 12:41:25 +02:00
Antonis Lempesis e84dd5fe26 first 2022-12-21 12:41:23 +02:00
Sandro La Bruzzo 3c9826f186 updated lines function to it's implementation linesWithSeparators.map(l => l.stripLineEnd) in this way we force scala plugin compiler to consider this pipeline scala code and not java.string.lines() pipeline 2022-12-21 11:21:17 +01:00
Claudio Atzori 6aa91204a5 [orcid propagation] skip empty directories 2022-12-20 14:15:46 +01:00
Miriam Baglioni 6674cccb94 [BulkTag] description of parameters more comprehensive for those who do not implement it 2022-12-16 15:33:20 +01:00
Miriam Baglioni f37113a941 [BulkTag] moving xquery to get community configuration in dedicated file 2022-12-16 15:32:26 +01:00
Miriam Baglioni 8685eaa706 [Clean Country] added test to verify remove of country 2022-12-16 15:31:25 +01:00
Miriam Baglioni dc0ec88a58 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2022-12-16 13:18:32 +01:00
Miriam Baglioni d791840b82 [Clean Country] added test to verify remove of country: 2022-12-16 13:18:29 +01:00
Claudio Atzori 7b80b24f82 [cleaning] country cleaning must use both PID and AlternateIdentifier fields 2022-12-15 14:49:04 +01:00
Claudio Atzori b8bafab8a0 [cleaning] improved vocabulary based mapping, specialization for the strict vocab cleaning 2022-12-12 14:43:03 +01:00
Sandro La Bruzzo 5e4866d033 implemented synch for single mdstore 2022-12-12 11:29:46 +01:00
Claudio Atzori c18b8048c3 [cleaning] avoid NPE 2022-12-10 11:41:38 +01:00
Claudio Atzori 8b44afe5e5 [cleaning] avoid NPE 2022-12-09 15:44:57 +01:00
Claudio Atzori 389dd25430 [cleaning] avoid NPE 2022-12-08 18:40:48 +01:00
Claudio Atzori 730228d73d [cleaning] align wf parameter names in test 2022-12-08 18:40:22 +01:00
Claudio Atzori 2094fa6db0 [cleaning] align wf parameter names 2022-12-08 17:22:26 +01:00
Miriam Baglioni a485a94956 [Cleaning] fixed parameter name in property file 2022-12-08 16:59:34 +01:00
Miriam Baglioni 3d99b78d94 [Cleaning] fixed error in parameter (workingPath to workingDir) 2022-12-08 10:25:02 +01:00
Claudio Atzori 1b8488976b code formatting 2022-12-07 10:45:38 +01:00
Claudio Atzori cd1b58483e [bulk tag] fixed Community configuration parsing to void NPE 2022-12-07 10:39:00 +01:00
Claudio Atzori 062abfd669 fixed NPE, removed unused stuff 2022-12-06 12:04:00 +01:00
dimitrispie 2a52a42169 Added 4 institutions: 
-University of Modena and Reggio Emilia
-Bilkent University
-Saints Cyril and Methodius University of Skopje
-University of Milan
 2022-12-06 10:10:21 +02:00
Claudio Atzori 8248da40d9 Merge branch 'beta' into graph_cleaning 2022-12-02 14:49:00 +01:00
Claudio Atzori ddf065756f Merge pull request 'Two organizations are added for monitor' (#258) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#258
 2022-12-02 14:45:27 +01:00
Sandro La Bruzzo 5a48a2fb18 implemented synch for single mdstore 2022-12-01 11:34:43 +01:00
Claudio Atzori a38116546d Merge branch 'beta' into deduptesting 2022-11-30 11:27:29 +01:00
Miriam Baglioni ce020f2c83 [EOSC FUTURE] added resources and test for review 2022-11-30 09:57:30 +01:00
Miriam Baglioni bb0ddc1c44 [BulkTag] adding verb starts_with 2022-11-30 09:56:24 +01:00
Claudio Atzori 8e3edba318 [graph cleaning] testing the collectedfron and hostedby patch procedure 2022-11-29 16:07:09 +01:00
Claudio Atzori 58c05731f9 [graph cleaning] WIP: testing the collectedfron and hostedby patch procedure 2022-11-29 11:21:51 +01:00
Miriam Baglioni 9c70c5dbd6 [Bulk Tag horizontal] added new path in definition of constraint (to recognize fos subjects) - changed test and resource class to test this new aspect 2022-11-28 14:51:20 +01:00
Miriam Baglioni 0628df7a3a resolving conflicts 2022-11-28 10:44:56 +01:00
Claudio Atzori 11695ba649 [graph cleaning] patch also the result's collectedfrom and hostedby datasource name according to the datasource master-duplicate mapping 2022-11-28 10:18:43 +01:00
Claudio Atzori 6082d235d3 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into graph_cleaning 2022-11-28 09:54:48 +01:00
Claudio Atzori 24ef301cc1 [graph cleaning] patch the result's collectedfrom and hostedby identifiers according to the datasource master-duplicate mapping 2022-11-28 09:54:18 +01:00
Alessia Bardi 90c8f9cb61 tests for EOSC Future 2022-11-23 12:18:44 +01:00
Miriam Baglioni 0e3edc5018 [Bulk Tag] fixed issue in verb name 2022-11-23 11:26:36 +01:00
Claudio Atzori a79c47522d updated ORCID datasource identifier 2022-11-23 10:17:49 +01:00
Alessia Bardi 2832117f23 added eoscifguidelines in test 2022-11-22 18:01:12 +01:00
Alessia Bardi 3c08269a4d Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2022-11-22 17:31:00 +01:00
Alessia Bardi 2687fc9f73 tests for EOSC Future review - ROhub 2022-11-22 17:30:56 +01:00
Claudio Atzori 1d5143b0b6 Merge branch 'beta' into deduptesting 2022-11-22 10:21:30 +01:00
Claudio Atzori 0aa725083f extended dedup testing 2022-11-17 16:13:43 +01:00
Claudio Atzori 3dbc637d3e code formatting 2022-11-17 09:55:41 +01:00
Claudio Atzori ddff0e8999 merging duplicates using IdentifierComparator 2022-11-11 16:10:25 +01:00
Claudio Atzori 5af5a8ae42 added IdentifierComparator 2022-11-09 14:20:59 +01:00
Claudio Atzori 7c3390ac10 Merge branch 'beta' into eoscifguidelines-from-mdstores 2022-11-07 12:18:40 +01:00
dimitrispie 992fc5b628 Added McMaster University Institution 2022-11-03 11:02:18 +02:00
dimitrispie 7fda05e380 Added Autonomous University of Barcelona 2022-11-01 13:59:40 +02:00
Claudio Atzori 22873c9172 Merge pull request 'Added fields: totalcost, fundedamount, currency, in project table' (#257) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#257
 2022-10-31 13:49:27 +01:00