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5338 Commits

Author SHA1 Message Date
Claudio Atzori 6a19337dab Merge pull request 'removed legacy actionmanager dependencies' (#454) from cleanup_actionmanager_deps into beta 
Reviewed-on: D-Net/dnet-hadoop#454
 2024-07-17 10:20:44 +02:00
Miriam Baglioni d96215cb9b [UnpayWall]added othe : in the identifier construction 2024-07-16 18:17:32 +02:00
Miriam Baglioni 9246bdec1c [WebCrawlAffiliation]remove from the creation of the action set the relations for pmc and pmid. Only doi are allowed 2024-07-16 14:07:37 +02:00
Miriam Baglioni 9d27910144 [BulkTag]added tagging for the organization relevant for the community. Added test. Changed the tagging variables. 2024-07-16 13:48:48 +02:00
Claudio Atzori beb93cdfe9 [graph provision] expand the context info for each entity type 2024-07-16 11:43:48 +02:00
Claudio Atzori 5aa7847ea6 consider the transformative agreement text when merging results 2024-07-16 10:38:50 +02:00
Claudio Atzori 38f8ed27fd [graph provision] log the Solr admin application operations for alias deletion and creation 2024-07-15 16:30:43 +02:00
Claudio Atzori 1fb44198fb renamed workflow to better reflect its purpose 2024-07-15 15:24:38 +02:00
Claudio Atzori 6f6e85ddf4 code formatting 2024-07-15 09:32:04 +02:00
Claudio Atzori 7fa3d51200 renamed class, updated criteria to consider the ORCIDs used in the matchers 2024-07-15 09:18:58 +02:00
Michele Artini f99fb21040 tests 2024-07-15 09:18:46 +02:00
Claudio Atzori e17edb2581 [broker] fine tuned the workflow memory settings 2024-07-12 10:27:50 +02:00
Claudio Atzori 61d1fa9b9f [metadata collection] added -Dcom.sun.security.enableAIAcaIssuers=true as a default for metadata collection 2024-07-12 10:26:45 +02:00
Claudio Atzori f9ed2ae33c [metadata collection] added the possibility to specify the JAVA_HOME and the JAVA_OPTS parameters 2024-07-11 15:32:36 +02:00
Michele Artini bbe52584f7 log message 2024-07-11 15:14:34 +02:00
Michele Artini 5cdba9172b implementeation of the new collector plugin: research_fi 2024-07-10 14:53:13 +02:00
Michele De Bonis 2a36ccb997 optimization of normalization stage in openorgs workflow, implementation of new comparators replacing older versions, openorgs configuration update, addition of inference flag in model definition, new test classes 2024-07-09 16:58:10 +02:00
Miriam Baglioni c465835061 [Person]new implementation for the extraction of the coAuthorship relations 2024-07-09 12:29:55 +02:00
Miriam Baglioni 814e650e12 [Irish Tender]changed the irish.json file according to comments #26, #29, and #34 for 9635 2024-07-04 12:24:28 +02:00
Miriam Baglioni ddd20e7f8e [Person]first implementation of the action set to include Person entity in the graph starting from the orcid data 2024-07-04 12:08:46 +02:00
Claudio Atzori 1180d78b71 make entity level pids unique by pidType:pidValue 2024-07-04 09:41:12 +02:00
Claudio Atzori bb12d0b4df removed legacy actionmanager dependencies 2024-07-03 16:26:39 +02:00
Claudio Atzori 7d3292551b ignore dates containing 'null's 2024-07-02 15:44:31 +02:00
Claudio Atzori c7634c55c7 Merge pull request '[beta] implementation of countryMatch and addition of workflow parameters' (#451) from openorgs_fixes into beta 
Reviewed-on: D-Net/dnet-hadoop#451
 2024-07-01 09:22:56 +02:00
Miriam Baglioni a2b708bb71 [AffiliationIngestion]refactoring 2024-06-29 18:36:47 +02:00
Miriam Baglioni 9cbe966b4a [AffiliationIngestion]refactoring 2024-06-29 18:35:49 +02:00
Miriam Baglioni 236b64d830 [AffiliationIngestion]Extended the ingestion of affiliation from open aire to include also links derived from Web Crawl. Extended the test. Inserted in Constatns the id and name of the webcrawl datasource to be used here and also in the ingestion of links from web crawl 2024-06-29 18:29:20 +02:00
Miriam Baglioni 67ff783e65 [Person]First implementation to include Person entity in the graph 2024-06-29 17:13:01 +02:00
Michele De Bonis a10e8d9f05 implementation of countryMatch and addition of workflow parameters 2024-06-28 16:46:52 +02:00
Claudio Atzori 14539f9c8b [graph provision] publicFormat worfklow parameter defined as optional 2024-06-28 14:55:18 +02:00
Claudio Atzori 1bc8c5d173 [graph provision] fixed serialization of the instancetypes 2024-06-28 14:54:28 +02:00
Claudio Atzori 1ccf01cdb8 Using the updated Solr JSON payload model classes 2024-06-28 12:38:07 +02:00
Claudio Atzori b79cb155ba Merge pull request 'Fix permissions-issue in Stats-workflow, step22a-createPDFsAggregated.' (#450) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#450
 2024-06-26 10:11:34 +02:00
Claudio Atzori 33a02c5b9e Merge pull request 'Change the selection criteria for the pivot record of a group so that by best pid type becomes the first criteria. This will have the effect to converge to records having DOI pid' (#446) from pivotselectionbypid into beta 
Reviewed-on: D-Net/dnet-hadoop#446
 2024-06-26 10:10:13 +02:00
Claudio Atzori 1182bca9eb Merge pull request 'Add support to cretate/update solr collection aliases' (#449) from 9872-create-solr-collection-aliases into beta 
Reviewed-on: D-Net/dnet-hadoop#449
 2024-06-26 10:09:51 +02:00
Claudio Atzori 1c30eacac2 updated index feeding procedure to exploit the collection aliases 2024-06-25 15:27:38 +02:00
Claudio Atzori 6055212f77 merged from the json_payload branch 2024-06-25 12:39:02 +02:00
Claudio Atzori 0031cf849e Merge branch 'beta' into 9872-create-solr-collection-aliases 2024-06-25 09:58:01 +02:00
Serafeim Chatzopoulos 9f6e16a03c Add support to cretate/update solr collection aliases 2024-06-20 16:03:15 +03:00
Lampros Smyrnaios 66cd28f70a - Fix not using the "export HADOOP_USER_NAME" statement in "createPDFsAggregated.sh", which caused permission-issues when creating tables with Impala. 
- Remove unused "--user" parameter in "impala-shell" calls.
- Code polishing.
 2024-06-20 14:33:46 +03:00
Lampros Smyrnaios c6b1ab2a18 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2024-06-20 14:33:05 +03:00
Miriam Baglioni d35edac212 [IrishFunderList]make changed according to 9635 comment 20, 21, 22 and 23 2024-06-20 12:28:28 +02:00
Miriam Baglioni 6421f8fece Merge remote-tracking branch 'origin/beta' into beta 2024-06-19 11:12:15 +02:00
Miriam Baglioni ac270f795b [IrishFunderList]make changed according to 9635 comment 14, 15 and 16 2024-06-19 11:11:52 +02:00
Lampros Smyrnaios 236aed8954 Merge remote-tracking branch 'origin/beta' into beta 2024-06-18 17:12:35 +03:00
Claudio Atzori dd541f8cf5 Merge pull request 'Miscellaneous updates to the copying operation to Impala Cluster.' (#447) from antonis.lempesis/dnet-hadoop:beta into beta 
Reviewed-on: D-Net/dnet-hadoop#447
 2024-06-18 15:52:30 +02:00
Lampros Smyrnaios ff335578ea Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2024-06-18 14:52:31 +03:00
Lampros Smyrnaios 285416c74e Merge branch 'beta' into beta 2024-06-18 13:50:38 +02:00
Lampros Smyrnaios 3095047e5e Miscellaneous updates to the copying operation to Impala Cluster: 
- Fix not breaking out of the VIEWS-infinite-loop when the "SHOULD_EXIT_WHOLE_SCRIPT_UPON_ERROR" is set to "false".
- Exit the script when no HDFS-active-node was found, independently of the "SHOULD_EXIT_WHOLE_SCRIPT_UPON_ERROR".
- Fix view_name-recognition in a log-message, by using the more advanced "Perl-Compatible Regular Expressions" in "grep".
- Add error-handling for "compute stats" errors.
 2024-06-18 14:40:41 +03:00
Antonis Lempesis 0456f1b788 Merge remote-tracking branch 'origin/beta' into beta 2024-06-14 15:11:30 +03:00