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4592 Commits

Author SHA1 Message Date
Claudio Atzori 4e55ddc547 [PubMed aggregation] storing contents into mdStoreVersion/store 2024-11-19 16:50:42 +01:00
Claudio Atzori ff5cb32067 Merge pull request 'abstracts in ODF records from the datacite and the dc nsPrefixes' (#508) from abtracts_guidelines4 into beta 
Reviewed-on: D-Net/dnet-hadoop#508
 2024-11-19 15:12:53 +01:00
Claudio Atzori a48d080e08 Merge pull request 'Improve OAF Generation from Baseline PubMed Collection' (#504) from pubmed_fix into beta 
Reviewed-on: D-Net/dnet-hadoop#504
 2024-11-19 15:12:37 +01:00
Claudio Atzori 9e439f5eca map the abstracts considering both the datacite and the dc nsPrefix 2024-11-15 12:19:26 +01:00
Claudio Atzori cf7d9a32ab disable autoBroadcastJoin in the cleaning workflow 2024-11-15 09:17:28 +01:00
Claudio Atzori 5f512f510e code formatting 2024-11-15 09:16:51 +01:00
Claudio Atzori 9e8849b753 Merge branch 'beta' of https://code-repo.d4science.org/D-Net/dnet-hadoop into beta 2024-11-13 20:41:51 +01:00
sandro.labruzzo 4778a70478 Merge remote-tracking branch 'origin/beta' into pubmed_fix 2024-11-13 16:28:39 +01:00
Claudio Atzori 4a3b173ca2 defaults to 0000 - Unknown in case the instance type lookup in the dnet:result_typologies doesn't find a corresponding result type binding 2024-11-13 16:27:00 +01:00
sandro.labruzzo ac0a94d62d updated pubmed parser to add also ORCID id and affiliation string to authors 2024-11-13 16:26:59 +01:00
Giambattista Bloisi 5ee8881646 Merge pull request '[danishfunders] added link for danish funders versus the unidentified project for IRFD (501100004836) CF (501100002808) and NNF(501100009708)' (#502) from danishFunders_crossrefmap into beta 
Reviewed-on: D-Net/dnet-hadoop#502
 2024-11-13 12:01:38 +01:00
Miriam Baglioni fb1f0f8850 [danishfunders] added the possibility to link also versus a specif award if present in the metadata 2024-11-13 12:00:33 +01:00
Giambattista Bloisi 03c262ccb9 Crossref: generate canonical openaire id for results in affiliation relationship 2024-11-13 10:56:17 +01:00
sandro.labruzzo a1d5ad5c26 code formatted 2024-11-13 09:51:13 +01:00
sandro.labruzzo b0478c380e merged conflicts on beta 2024-11-13 09:43:16 +01:00
Claudio Atzori 8088943399 Merge pull request 'enforce resulttype' (#506) from merge_resulttypes into beta 
Reviewed-on: D-Net/dnet-hadoop#506
 2024-11-12 14:20:22 +01:00
Claudio Atzori 6c5df761e2 enforce resulttype based on the dnet:result_typologies vocabulary and upon merge 2024-11-12 14:18:04 +01:00
Miriam Baglioni 250f101779 [person] fixed issue in creating project identifier for the graph for person->project relations 2024-11-11 16:04:06 +01:00
Miriam Baglioni f1ea9da5bc [person] checked type in inferenceprovenance 2024-11-11 15:37:56 +01:00
Miriam Baglioni b0283fe94c [person] fix provenance of pid in person when it is orcid (classid entityregistry to avoid the cleaning put orcid_pending) 2024-11-11 14:57:57 +01:00
sandro.labruzzo 474f365286 removed wrong test 2024-11-11 12:37:27 +01:00
sandro.labruzzo 19ce783e58 renamed workflow 2024-11-11 12:28:02 +01:00
Sandro La Bruzzo 0d0904f4ec updated workflow baseline to direct transform on OAF 2024-11-11 10:27:23 +01:00
Miriam Baglioni 6fd9ec8566 [danishfunders] added link for danish funders versus the unidentified project for IRFD (501100004836) CF (501100002808) and NNF(501100009708) 2024-11-07 13:55:31 +01:00
Claudio Atzori f7bb53fe78 [orcid enrichment] added missing workflow parameter: workingDir 2024-11-07 01:04:43 +01:00
Claudio Atzori 973aa7dca6 [dedup] force the Relation schema when reading the merge rels 2024-11-06 12:29:06 +01:00
Sandro La Bruzzo c1cef5d685 removed old library joda time replaced with standard java.time introduced in java 8 2024-11-05 10:38:40 +01:00
Sandro La Bruzzo a8ed5a3b04 Organized getters and setters in the PMArticle class for better readability and maintainability. 2024-11-04 17:45:28 +01:00
Claudio Atzori a42c8b7c85 person table directory produced by the workflows raw_all and merge graphs 2024-10-30 11:25:17 +01:00
Claudio Atzori 323c76eafc patch relations job: removed non necessary logging 2024-10-30 07:35:30 +01:00
Miriam Baglioni 69aee609ef [bulktag] align type to community api 2024-10-29 15:53:04 +01:00
Claudio Atzori 499892b67c [graph raw] rule out empty PIDs 2024-10-29 09:51:30 +01:00
Claudio Atzori e4504fd98d [Person] fixed project identifier creation 2024-10-28 15:32:09 +01:00
Claudio Atzori 9b4415cb67 using _the right_ scala 2.11 converters 2024-10-28 13:56:25 +01:00
Claudio Atzori e6ca382deb using scala 2.11 converters 2024-10-28 13:52:06 +01:00
Claudio Atzori 940735921f Merge pull request 'Fill mergedIds field and filter mergerels with dedup records actually created' (#500) from mergedids into beta 
Reviewed-on: D-Net/dnet-hadoop#500
 2024-10-28 13:43:09 +01:00
Giambattista Bloisi 56224e034a Fill the new mergedIds field when generating dedup records 
Filter out dedup records composed of invisible records only
Filter out mergerels that have not been used when creating the dedup record (ungrouping of cliques)
 2024-10-28 13:31:01 +01:00
Miriam Baglioni 5916346ba1 [TransformativeAgreement] fix to remove the file downloaded from a previous run of the workflow 2024-10-28 12:18:50 +01:00
Claudio Atzori e4abe55988 merged person_through_the_graph & code formatting 2024-10-28 11:01:49 +01:00
Claudio Atzori d71df6de19 Merge pull request 'affroNewModelonBeta' (#494) from affroNewModelonBeta into beta 
Reviewed-on: D-Net/dnet-hadoop#494
 2024-10-28 10:48:34 +01:00
Claudio Atzori 1cdcd07a7e Merge pull request 'dhp-schema upgrade & provision mapping 2' (#499) from beta_provision_alignment_9.0.0 into beta 
Reviewed-on: D-Net/dnet-hadoop#499
 2024-10-28 10:44:08 +01:00
Claudio Atzori 6fd50266f1 translate 'otherresearchproduct' into 'other' when setting the related record type 2024-10-28 10:42:46 +01:00
Claudio Atzori dffa376eb6 Merge pull request 'dhp-schema upgrade & provision mapping' (#498) from beta_provision_alignment_9.0.0 into beta 
Reviewed-on: D-Net/dnet-hadoop#498
 2024-10-28 10:03:24 +01:00
Claudio Atzori 32fa579b80 [graph provision] select the longest abstract 2024-10-28 10:03:02 +01:00
Claudio Atzori 67e37f41fb Merge pull request 'blacklist filtering moved before the cleanup phase in order to have case sensitive regex' (#485) from dedup_blacklist_fix into beta 
Reviewed-on: D-Net/dnet-hadoop#485
 2024-10-28 09:42:51 +01:00
Miriam Baglioni 0fb6af5586 Updated main pom dependency against dhp-schema, from 8.0.1 to 9.0.0. The new fields included in the updated schema module are populated by the Solr JSON payload mapping, which also limits the number of authors serialised to 200. 2024-10-25 16:28:50 +02:00
Claudio Atzori 46dbb62598 Merge pull request '#9839: include claimed affiliation relationships' (#476) from claim-orgs into beta 
Reviewed-on: D-Net/dnet-hadoop#476
 2024-10-25 10:12:59 +02:00
Claudio Atzori 4a9aeb6238 Merge pull request '9126-impact-indicators-wf-optimisation' (#471) from 9126-impact-indicators-wf-optimisation into beta 
Reviewed-on: D-Net/dnet-hadoop#471
 2024-10-25 10:10:44 +02:00
Claudio Atzori 8172bee8c8 Merge pull request 'Minor fixes' (#496) from beta_fixes_oct into beta 
Reviewed-on: D-Net/dnet-hadoop#496
 2024-10-25 10:09:56 +02:00
Miriam Baglioni 1fce7d5a0f [Person] remove the isolated nodes from the person set 2024-10-25 10:05:17 +02:00