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moved cache update to the end

This commit is contained in:
Antonis Lempesis 2021-02-18 16:42:22 +02:00
parent bcbfc052b1
commit b8e96c8ae7
3 changed files with 19 additions and 19 deletions
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6
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/monitor.sh
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@ -15,11 +15,11 @@ echo "Getting file from " $4
hdfs dfs -copyToLocal $4 hdfs dfs -copyToLocal $4
echo "Creating monitor database" echo "Creating monitor database"
cat step21-createMonitorDB.sql | sed s/SOURCE/$1/g | sed s/TARGET/$2/g1 | impala-shell -f - cat step20-createMonitorDB.sql | sed s/SOURCE/$1/g | sed s/TARGET/$2/g1 | impala-shell -f -
echo "Impala shell finished" echo "Impala shell finished"
echo "Updating shadow monitor database" echo "Updating shadow monitor database"
impala-shell -q "create database if not exists ${SHADOW}" impala-shell -q "create database if not exists ${SHADOW}"
impala-shell -d $SHADOW -q "show tables" --delimited | sed "s/^/drop view if exists ${SHADOW}./" | sed "s/$/;/" | impala-shell -f - impala-shell -d ${SHADOW} -q "show tables" --delimited | sed "s/^/drop view if exists ${SHADOW}./" | sed "s/$/;/" | impala-shell -f -
impala-shell -d $TARGET -q "show tables" --delimited | sed "s/\(.*\)/create view ${SHADOW}.\1 as select * from ${TARGET}.\1;/" | impala-shell -f - impala-shell -d ${TARGET} -q "show tables" --delimited | sed "s/\(.*\)/create view ${SHADOW}.\1 as select * from ${TARGET}.\1;/" | impala-shell -f -
echo "Shadow db ready!" echo "Shadow db ready!"

0
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step21-createMonitorDB.sql → dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/scripts/step20-createMonitorDB.sql
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30
dhp-workflows/dhp-stats-update/src/main/resources/eu/dnetlib/dhp/oa/graph/stats/oozie_app/workflow.xml
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@ -299,23 +299,11 @@
<argument>${wf:appPath()}/scripts/step19.sql</argument> <argument>${wf:appPath()}/scripts/step19.sql</argument>
<file>impala-shell.sh</file> <file>impala-shell.sh</file>
</shell> </shell>
<ok to="Step20"/> <ok to="step20-createMonitorDB"/>
<error to="Kill"/> <error to="Kill"/>
</action> </action>
<action name="Step20"> <action name="step20-createMonitorDB">
<shell xmlns="uri:oozie:shell-action:0.1">
<job-tracker>${jobTracker}</job-tracker>
<name-node>${nameNode}</name-node>
<exec>updateCache.sh</exec>
<argument>${stats_tool_api_url}</argument>
<file>updateCache.sh</file>
</shell>
<ok to="step21-createMonitorDB"/>
<error to="Kill"/>
</action>
<action name="step21-createMonitorDB">
<shell xmlns="uri:oozie:shell-action:0.1"> <shell xmlns="uri:oozie:shell-action:0.1">
<job-tracker>${jobTracker}</job-tracker> <job-tracker>${jobTracker}</job-tracker>
<name-node>${nameNode}</name-node> <name-node>${nameNode}</name-node>
@ -323,9 +311,21 @@
<argument>${stats_db_name}</argument> <argument>${stats_db_name}</argument>
<argument>${monitor_db_name}</argument> <argument>${monitor_db_name}</argument>
<argument>${monitor_db_shadow_name}</argument> <argument>${monitor_db_shadow_name}</argument>
<argument>${wf:appPath()}/scripts/step21-createMonitorDB.sql</argument> <argument>${wf:appPath()}/scripts/step20-createMonitorDB.sql</argument>
<file>monitor.sh</file> <file>monitor.sh</file>
</shell> </shell>
<ok to="Step21"/>
<error to="Kill"/>
</action>
<action name="Step21">
<shell xmlns="uri:oozie:shell-action:0.1">
<job-tracker>${jobTracker}</job-tracker>
<name-node>${nameNode}</name-node>
<exec>updateCache.sh</exec>
<argument>${stats_tool_api_url}</argument>
<file>updateCache.sh</file>
</shell>
<ok to="End"/> <ok to="End"/>
<error to="Kill"/> <error to="Kill"/>
</action> </action>