forked from D-Net/dnet-hadoop
cleanup on transformation functions and the relative tests
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parent
fc3fa5e343
commit
9c899f4433
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@ -4,7 +4,10 @@ package eu.dnetlib.dhp.transformation.xslt;
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import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup;
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import eu.dnetlib.dhp.common.vocabulary.VocabularyGroup;
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import eu.dnetlib.dhp.schema.oaf.Qualifier;
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import eu.dnetlib.dhp.schema.oaf.Qualifier;
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import net.sf.saxon.s9api.*;
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import net.sf.saxon.s9api.*;
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import scala.Serializable;
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import java.io.Serializable;
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import static eu.dnetlib.dhp.transformation.xslt.XSLTTransformationFunction.QNAME_BASE_URI;
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public class Cleaner implements ExtensionFunction, Serializable {
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public class Cleaner implements ExtensionFunction, Serializable {
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@ -16,7 +19,7 @@ public class Cleaner implements ExtensionFunction, Serializable {
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@Override
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@Override
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public QName getName() {
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public QName getName() {
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return new QName("http://eu/dnetlib/transform/extension", "clean");
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return new QName(QNAME_BASE_URI + "/clean", "clean");
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}
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}
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@Override
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@Override
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@ -1,6 +1,7 @@
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package eu.dnetlib.dhp.transformation.xslt;
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package eu.dnetlib.dhp.transformation.xslt;
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import java.io.Serializable;
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import java.time.LocalDate;
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import java.time.LocalDate;
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import java.time.format.DateTimeFormatter;
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import java.time.format.DateTimeFormatter;
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import java.util.*;
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import java.util.*;
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@ -8,7 +9,8 @@ import java.util.regex.Matcher;
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import java.util.regex.Pattern;
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import java.util.regex.Pattern;
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import net.sf.saxon.s9api.*;
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import net.sf.saxon.s9api.*;
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import scala.Serializable;
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import static eu.dnetlib.dhp.transformation.xslt.XSLTTransformationFunction.QNAME_BASE_URI;
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public class DateCleaner implements ExtensionFunction, Serializable {
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public class DateCleaner implements ExtensionFunction, Serializable {
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@ -91,7 +93,7 @@ public class DateCleaner implements ExtensionFunction, Serializable {
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@Override
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@Override
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public QName getName() {
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public QName getName() {
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return new QName("http://eu/dnetlib/trasform/dates", "dateISO");
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return new QName(QNAME_BASE_URI + "/dateISO", "dateISO");
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}
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}
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@Override
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@Override
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@ -15,6 +15,8 @@ import net.sf.saxon.s9api.*;
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public class XSLTTransformationFunction implements MapFunction<MetadataRecord, MetadataRecord> {
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public class XSLTTransformationFunction implements MapFunction<MetadataRecord, MetadataRecord> {
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public final static String QNAME_BASE_URI = "http://eu/dnetlib/transform";
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private final AggregationCounter aggregationCounter;
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private final AggregationCounter aggregationCounter;
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private final String transformationRule;
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private final String transformationRule;
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@ -5,7 +5,6 @@ import static eu.dnetlib.dhp.common.Constants.MDSTORE_DATA_PATH;
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import static org.junit.jupiter.api.Assertions.assertEquals;
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import static org.junit.jupiter.api.Assertions.assertEquals;
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import java.io.IOException;
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import java.io.IOException;
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import java.nio.file.Files;
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import java.nio.file.Path;
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import java.nio.file.Path;
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import java.util.Map;
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import java.util.Map;
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import java.util.stream.Collectors;
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import java.util.stream.Collectors;
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@ -35,26 +34,11 @@ import eu.dnetlib.enabling.is.lookup.rmi.ISLookUpException;
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@ExtendWith(MockitoExtension.class)
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@ExtendWith(MockitoExtension.class)
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public class TransformationJobTest extends AbstractVocabularyTest {
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public class TransformationJobTest extends AbstractVocabularyTest {
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private static SparkSession spark;
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@BeforeAll
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public static void beforeAll() throws IOException, ISLookUpException {
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SparkConf conf = new SparkConf();
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conf.setAppName(TransformationJobTest.class.getSimpleName());
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conf.setMaster("local");
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spark = SparkSession.builder().config(conf).getOrCreate();
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}
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@BeforeEach
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@BeforeEach
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public void setUp() throws IOException, ISLookUpException {
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public void setUp() throws IOException, ISLookUpException {
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setUpVocabulary();
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setUpVocabulary();
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}
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}
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@AfterAll
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public static void afterAll() {
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spark.stop();
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}
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@Test
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@Test
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@DisplayName("Test Date cleaner")
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@DisplayName("Test Date cleaner")
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public void testDateCleaner() throws Exception {
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public void testDateCleaner() throws Exception {
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@ -82,13 +66,18 @@ public class TransformationJobTest extends AbstractVocabularyTest {
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// Print the record
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// Print the record
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System.out.println(result.getBody());
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System.out.println(result.getBody());
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// TODO Create significant Assert
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// TODO Create significant Assert
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}
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}
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@DisplayName("Test TransformSparkJobNode.main")
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@Test
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@Test
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@DisplayName("Test TransformSparkJobNode.main")
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public void transformTest(@TempDir Path testDir) throws Exception {
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public void transformTest(@TempDir Path testDir) throws Exception {
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SparkConf conf = new SparkConf();
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conf.setAppName(TransformationJobTest.class.getSimpleName());
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conf.setMaster("local");
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try(SparkSession spark = SparkSession.builder().config(conf).getOrCreate()) {
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final String mdstore_input = this.getClass().getResource("/eu/dnetlib/dhp/transform/mdstorenative").getFile();
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final String mdstore_input = this.getClass().getResource("/eu/dnetlib/dhp/transform/mdstorenative").getFile();
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final String mdstore_output = testDir.toString() + "/version";
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final String mdstore_output = testDir.toString() + "/version";
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@ -131,19 +120,7 @@ public class TransformationJobTest extends AbstractVocabularyTest {
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assertEquals(total, recordTs);
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assertEquals(total, recordTs);
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assertEquals(total, recordNotEmpty);
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assertEquals(total, recordNotEmpty);
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}
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}
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@Test
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public void tryLoadFolderOnCP() throws Exception {
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final String path = this.getClass().getResource("/eu/dnetlib/dhp/transform/mdstorenative").getFile();
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System.out.println("path = " + path);
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Path tempDirWithPrefix = Files.createTempDirectory("mdstore_output");
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System.out.println(tempDirWithPrefix.toFile().getAbsolutePath());
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Files.deleteIfExists(tempDirWithPrefix);
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}
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}
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private XSLTTransformationFunction loadTransformationRule(final String path) throws Exception {
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private XSLTTransformationFunction loadTransformationRule(final String path) throws Exception {
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@ -1,7 +1,7 @@
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<xsl:stylesheet xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
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<xsl:stylesheet xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
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xmlns:oai="http://www.openarchives.org/OAI/2.0/"
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xmlns:oai="http://www.openarchives.org/OAI/2.0/"
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xmlns:oaf="http://namespace.openaire.eu/oaf"
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xmlns:oaf="http://namespace.openaire.eu/oaf"
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xmlns:vocabulary="http://eu/dnetlib/transform/extension"
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xmlns:vocabulary="http://eu/dnetlib/transform/clean"
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xmlns:dr="http://www.driver-repository.eu/namespace/dr"
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xmlns:dr="http://www.driver-repository.eu/namespace/dr"
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version="2.0"
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version="2.0"
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exclude-result-prefixes="xsl vocabulary">
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exclude-result-prefixes="xsl vocabulary">
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@ -3,8 +3,8 @@
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xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
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xmlns:xsl="http://www.w3.org/1999/XSL/Transform"
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xmlns:oai="http://www.openarchives.org/OAI/2.0/"
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xmlns:oai="http://www.openarchives.org/OAI/2.0/"
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xmlns:oaf="http://namespace.openaire.eu/oaf"
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xmlns:oaf="http://namespace.openaire.eu/oaf"
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xmlns:vocabulary="http://eu/dnetlib/trasform/extension"
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xmlns:vocabulary="http://eu/dnetlib/transform/clean"
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xmlns:dateCleaner="http://eu/dnetlib/trasform/dates"
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xmlns:dateCleaner="http://eu/dnetlib/transform/dateISO"
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xmlns:dr="http://www.driver-repository.eu/namespace/dr"
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xmlns:dr="http://www.driver-repository.eu/namespace/dr"
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exclude-result-prefixes="xsl vocabulary dateCleaner">
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exclude-result-prefixes="xsl vocabulary dateCleaner">
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<xsl:param name="varOfficialName"/>
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<xsl:param name="varOfficialName"/>
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