lsmyrnaios
/
dnet-hadoop
forked from D-Net/dnet-hadoop
1
0
Fork 0
Code Pull Requests Activity

refactoring

This commit is contained in:
Miriam Baglioni 2021-04-23 12:10:30 +02:00
parent 4ae6fba01d
commit 72e5aa3b42
1 changed files with 10 additions and 10 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

14
dhp-workflows/dhp-enrichment/src/main/java/eu/dnetlib/dhp/resulttoorganizationfrominstrepo/PrepareResultInstRepoAssociation.java
View File

@ -4,6 +4,11 @@ package eu.dnetlib.dhp.resulttoorganizationfrominstrepo;
import static eu.dnetlib.dhp.PropagationConstant.*; import static eu.dnetlib.dhp.PropagationConstant.*;
import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkHiveSession; import static eu.dnetlib.dhp.common.SparkSessionSupport.runWithSparkHiveSession;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.List;
import java.util.Optional;
import org.apache.commons.io.IOUtils; import org.apache.commons.io.IOUtils;
import org.apache.hadoop.io.compress.GzipCodec; import org.apache.hadoop.io.compress.GzipCodec;
import org.apache.spark.SparkConf; import org.apache.spark.SparkConf;
@ -22,11 +27,6 @@ import eu.dnetlib.dhp.schema.oaf.Datasource;
import eu.dnetlib.dhp.schema.oaf.Organization; import eu.dnetlib.dhp.schema.oaf.Organization;
import eu.dnetlib.dhp.schema.oaf.Relation; import eu.dnetlib.dhp.schema.oaf.Relation;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.List;
import java.util.Optional;
public class PrepareResultInstRepoAssociation { public class PrepareResultInstRepoAssociation {
private static final Logger log = LoggerFactory.getLogger(PrepareResultInstRepoAssociation.class); private static final Logger log = LoggerFactory.getLogger(PrepareResultInstRepoAssociation.class);
@ -56,7 +56,8 @@ public class PrepareResultInstRepoAssociation {
final String alreadyLinkedPath = parser.get("alreadyLinkedPath"); final String alreadyLinkedPath = parser.get("alreadyLinkedPath");
log.info("alreadyLinkedPath {}: ", alreadyLinkedPath); log.info("alreadyLinkedPath {}: ", alreadyLinkedPath);
List<String> blacklist = Optional.ofNullable(parser.get("blacklist")) List<String> blacklist = Optional
.ofNullable(parser.get("blacklist"))
.map(v -> Arrays.asList(v.split(";"))) .map(v -> Arrays.asList(v.split(";")))
.orElse(new ArrayList<>()); .orElse(new ArrayList<>());
@ -98,7 +99,6 @@ public class PrepareResultInstRepoAssociation {
} }
} }
String query = "SELECT source datasourceId, target organizationId " String query = "SELECT source datasourceId, target organizationId "
+ "FROM ( SELECT id " + "FROM ( SELECT id "
+ "FROM datasource " + "FROM datasource "