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added dhp-enrichment maven site template

This commit is contained in:
Sandro La Bruzzo 2021-11-16 16:01:08 +01:00
parent 18c1d70ef4
commit 2d67020c59
4 changed files with 32 additions and 2 deletions
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6
dhp-workflows/dhp-aggregation/src/site/markdown/pubmed.md
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@ -4,7 +4,7 @@ This section describes the mapping implemented for [MEDLINE/PubMed](https://pubm
Collection Collection
--------- ---------
The native data is collected from [ftp baseline](https://ftp.ncbi.nlm.nih.gov/pubmed/baseline/) containing XML with The native data is collected from [ftp baseline](https://ftp.ncbi.nlm.nih.gov/pubmed/baseline/) containing XML with
the following [shcema](https://www.nlm.nih.gov/bsd/licensee/elements_descriptions.html) the following [schema](https://www.nlm.nih.gov/bsd/licensee/elements_descriptions.html)
Parsing Parsing
@ -50,6 +50,10 @@ The table below describes the mapping from the XML Native to the OAF mapping
|//Author/FullName| author.Forename| Concatenation of forname + lastName if exist | |//Author/FullName| author.Forename| Concatenation of forname + lastName if exist |
|FOR ALL AUTHOR | author.rank| sequential number starting from 1| |FOR ALL AUTHOR | author.rank| sequential number starting from 1|
#TODO
Missing item mapped

1
dhp-workflows/dhp-aggregation/src/site/site.xml
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@ -20,7 +20,6 @@
<item name="Pubmed" href="pubmed.html"/> <item name="Pubmed" href="pubmed.html"/>
<item name="Datacite" href="datacite.html"/> <item name="Datacite" href="datacite.html"/>
</item> </item>
<item name="Release Notes" href="release-notes.html" />
<item name="General Information" href="about.html"/> <item name="General Information" href="about.html"/>
<item name="JavaDoc" href="apidocs/" /> <item name="JavaDoc" href="apidocs/" />

1
dhp-workflows/dhp-enrichment/src/site/markdown/about.md Normal file
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@ -0,0 +1 @@
#DHP Enrichment

26
dhp-workflows/dhp-enrichment/src/site/site.xml Normal file
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@ -0,0 +1,26 @@
<?xml version="1.0" encoding="ISO-8859-1"?>
<project xmlns="http://maven.apache.org/DECORATION/1.8.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://maven.apache.org/DECORATION/1.8.0 https://maven.apache.org/xsd/decoration-1.8.0.xsd"
name="DHP-Aggregation">
<skin>
<groupId>org.apache.maven.skins</groupId>
<artifactId>maven-fluido-skin</artifactId>
<version>1.8</version>
</skin>
<poweredBy>
<logo name="OpenAIRE Research Graph" href="https://graph.openaire.eu/"
img="https://graph.openaire.eu/assets/common-assets/logo-large-graph.png"/>
</poweredBy>
<body>
<links>
<item name="Code" href="https://code-repo.d4science.org/" />
</links>
<menu name="Documentation">
<item name="Link1 Collapsable" href="about.html" collapse="true">
<item name="item1" href="pubmed.html"/>
<item name="item2" href="datacite.html"/>
</item>
</menu>
<menu ref="reports"/>
</body>
</project>