update in the discovery of clustering, conditions and distance functions (annotated with custom annotations)

dnet-pace-core/pom.xml

@@ -55,6 +55,12 @@
 			<artifactId>junit</artifactId>
 			<scope>test</scope>
 		</dependency>
+		<dependency>
+			<groupId>org.reflections</groupId>
+			<artifactId>reflections</artifactId>
+			<version>0.9.10</version>
+		</dependency>
+
 	</dependencies>
 
 </project>

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/AbstractClusteringFunction.java

@@ -18,7 +18,13 @@ public abstract class AbstractClusteringFunction extends AbstractPaceFunctions i
 	public AbstractClusteringFunction(final Map<String, Integer> params) {
 		this.params = params;
 	}
-	
+
+	public AbstractClusteringFunction(){}
+
+	public void setParams(Map<String, Integer> params){
+		this.params = params;
+	}
+
 	protected abstract Collection<String> doApply(String s);
 	
 	@Override

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/Acronyms.java

@@ -7,12 +7,17 @@ import java.util.StringTokenizer;
 
 import com.google.common.collect.Sets;
 
+@ClusteringClass("acronyms")
 public class Acronyms extends AbstractClusteringFunction {
 
 	public Acronyms(Map<String, Integer> params) {
 		super(params);
 	}
 
+	public Acronyms(){
+		super();
+	}
+
 	@Override
 	protected Collection<String> doApply(String s) {
 		return extractAcronyms(s, param("max"), param("minLen"), param("maxLen"));

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/BlacklistAwareClusteringCombiner.java

@@ -22,9 +22,6 @@ public class BlacklistAwareClusteringCombiner extends ClusteringCombiner {
 
 	private static final Log log = LogFactory.getLog(BlacklistAwareClusteringCombiner.class);
 
-
-
-
 	public static Collection<String> filterAndCombine(final MapDocument a, final Config conf) {
 
 		final Document filtered = new BlacklistAwareClusteringCombiner().filter(a, conf.blacklists());

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/Clustering.java

@@ -1,5 +0,0 @@
-package eu.dnetlib.pace.clustering;
-
-public enum Clustering {
-	acronyms, ngrams, ngrampairs, sortedngrampairs, suffixprefix, spacetrimmingfieldvalue, immutablefieldvalue, personhash, personclustering, lowercase, urlclustering
-}

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/ClusteringClass.java

@@ -0,0 +1,13 @@
+package eu.dnetlib.pace.clustering;
+
+import java.lang.annotation.ElementType;
+import java.lang.annotation.Retention;
+import java.lang.annotation.RetentionPolicy;
+import java.lang.annotation.Target;
+
+@Retention(RetentionPolicy.RUNTIME)
+@Target(ElementType.TYPE)
+public @interface ClusteringClass {
+
+    public String value();
+}

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/ClusteringFunction.java

@@ -12,4 +12,5 @@ public interface ClusteringFunction {
 	
 	public Map<String, Integer> getParams();
 
+	public void setParams(Map<String, Integer> params);
 }

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/ClusteringResolver.java

@@ -0,0 +1,24 @@
+package eu.dnetlib.pace.clustering;
+
+import java.io.Serializable;
+import java.lang.reflect.InvocationTargetException;
+import java.util.Map;
+import java.util.stream.Collectors;
+
+import org.reflections.Reflections;
+
+public class ClusteringResolver implements Serializable {
+    private final Map<String, Class<ClusteringFunction>> functionMap;
+
+    public ClusteringResolver() {
+
+        this.functionMap = new Reflections("eu.dnetlib").getTypesAnnotatedWith(ClusteringClass.class).stream()
+                .filter(ClusteringFunction.class::isAssignableFrom)
+                .collect(Collectors.toMap(cl -> cl.getAnnotation(ClusteringClass.class).value(), cl -> (Class<ClusteringFunction>)cl));
+    }
+
+    public ClusteringFunction resolve(String clusteringFunction) throws IllegalAccessException, InstantiationException, NoSuchMethodException, InvocationTargetException {
+
+        return functionMap.get(clusteringFunction).newInstance();
+    }
+}

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/ImmutableFieldValue.java

@@ -6,12 +6,17 @@ import java.util.Map;
 
 import com.google.common.collect.Lists;
 
+@ClusteringClass("immutablefieldvalue")
 public class ImmutableFieldValue extends AbstractClusteringFunction {
 
 	public ImmutableFieldValue(final Map<String, Integer> params) {
 		super(params);
 	}
 
+	public ImmutableFieldValue() {
+		super();
+	}
+
 	@Override
 	protected Collection<String> doApply(final String s) {
 		final List<String> res = Lists.newArrayList();

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/LowercaseClustering.java

@@ -9,12 +9,17 @@ import com.google.common.collect.Sets;
 import eu.dnetlib.pace.model.Field;
 import org.apache.commons.lang.StringUtils;
 
+@ClusteringClass("lowercase")
 public class LowercaseClustering extends AbstractClusteringFunction {
 
 	public LowercaseClustering(final Map<String, Integer> params) {
 		super(params);
 	}
 
+	public LowercaseClustering(){
+		super();
+	}
+
 	@Override
 	public Collection<String> apply(List<Field> fields) {
 		Collection<String> c = Sets.newLinkedHashSet();

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/NgramPairs.java

@@ -6,8 +6,13 @@ import java.util.Map;
 
 import com.google.common.collect.Lists;
 
+@ClusteringClass("ngrampairs")
 public class NgramPairs extends Ngrams {
 
+	public NgramPairs() {
+		super();
+	}
+
 	public NgramPairs(Map<String, Integer> params) {
 		super(params);
 	}

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/Ngrams.java

@@ -5,12 +5,17 @@ import java.util.LinkedHashSet;
 import java.util.Map;
 import java.util.StringTokenizer;
 
+@ClusteringClass("ngrams")
 public class Ngrams extends AbstractClusteringFunction {
 
 	public Ngrams(Map<String, Integer> params) {
 		super(params);
 	}
-	
+
+	public Ngrams() {
+        super();
+    }
+
 	@Override
 	protected Collection<String> doApply(String s) {
 		return getNgrams(s, param("ngramLen"), param("max"), param("maxPerToken"), param("minNgramLen"));

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/PersonClustering.java

@@ -1,5 +1,6 @@
 package eu.dnetlib.pace.clustering;
 
+import java.io.Serializable;
 import java.util.Collection;
 import java.util.List;
 import java.util.Map;
@@ -18,6 +19,7 @@ import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.gt.Author;
 import eu.dnetlib.pace.model.gt.GTAuthor;
 
+@ClusteringClass("personclustering")
 public class PersonClustering extends AbstractPaceFunctions implements ClusteringFunction {
 
 	private Map<String, Integer> params;
@@ -28,6 +30,10 @@ public class PersonClustering extends AbstractPaceFunctions implements Clusterin
 		this.params = params;
 	}
 
+	public void setParams(Map<String, Integer> params){
+		this.params = params;
+	}
+
 	@Override
 	public Collection<String> apply(final List<Field> fields) {
 		final Set<String> hashes = Sets.newHashSet();

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/PersonHash.java

@@ -8,6 +8,7 @@ import com.google.common.collect.Lists;
 
 import eu.dnetlib.pace.model.Person;
 
+@ClusteringClass("personhash")
 public class PersonHash extends AbstractClusteringFunction {
 
 	private boolean DEFAULT_AGGRESSIVE = false;
@@ -16,6 +17,10 @@ public class PersonHash extends AbstractClusteringFunction {
 		super(params);
 	}
 
+	public PersonHash(){
+		super();
+	}
+
 	@Override
 	protected Collection<String> doApply(final String s) {
 		final List<String> res = Lists.newArrayList();

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/RandomClusteringFunction.java

@@ -9,6 +9,10 @@ public class RandomClusteringFunction extends AbstractClusteringFunction {
 		super(params);
 	}
 
+	public RandomClusteringFunction(){
+		super();
+	}
+
 	@Override
 	protected Collection<String> doApply(String s) {
 		// TODO Auto-generated method stub

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/SortedNgramPairs.java

@@ -9,12 +9,17 @@ import com.google.common.base.Joiner;
 import com.google.common.base.Splitter;
 import com.google.common.collect.Lists;
 
+@ClusteringClass("sortedngrampairs")
 public class SortedNgramPairs extends NgramPairs {
 
 	public SortedNgramPairs(Map<String, Integer> params) {
 		super(params);
 	}
 
+	public SortedNgramPairs(){
+		super();
+	}
+
 	@Override
 	protected Collection<String> doApply(String s) {
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/SpaceTrimmingFieldValue.java

@@ -9,12 +9,17 @@ import org.apache.commons.lang.StringUtils;
 
 import com.google.common.collect.Lists;
 
+@ClusteringClass("spacetrimmingfieldvalue")
 public class SpaceTrimmingFieldValue extends AbstractClusteringFunction {
 
 	public SpaceTrimmingFieldValue(final Map<String, Integer> params) {
 		super(params);
 	}
 
+	public SpaceTrimmingFieldValue(){
+		super();
+	}
+
 	@Override
 	protected Collection<String> doApply(final String s) {
 		final List<String> res = Lists.newArrayList();

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/SuffixPrefix.java

@@ -6,12 +6,17 @@ import java.util.Set;
 
 import com.google.common.collect.Sets;
 
+@ClusteringClass("suffixprefix")
 public class SuffixPrefix extends AbstractClusteringFunction {
 
 	public SuffixPrefix(Map<String, Integer> params) {
 		super(params);
 	}
 
+	public SuffixPrefix(){
+		super();
+	}
+
 	@Override
 	protected Collection<String> doApply(String s) {
 		return suffixPrefix(s, param("len"), param("max"));

dnet-pace-core/src/main/java/eu/dnetlib/pace/clustering/UrlClustering.java

@@ -11,6 +11,7 @@ import java.util.List;
 import java.util.Map;
 import java.util.stream.Collectors;
 
+@ClusteringClass("urlclustering")
 public class UrlClustering extends AbstractPaceFunctions implements ClusteringFunction {
 
     protected Map<String, Integer> params;
@@ -19,6 +20,14 @@ public class UrlClustering extends AbstractPaceFunctions implements ClusteringFu
         this.params = params;
     }
 
+    public UrlClustering() {
+        super();
+    }
+
+    public void setParams(Map<String, Integer> params){
+        this.params = params;
+    }
+
     @Override
     public Collection<String> apply(List<Field> fields) {
         return fields.stream()

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/AbstractCondition.java

@@ -2,7 +2,6 @@ package eu.dnetlib.pace.condition;
 
 import java.util.List;
 import eu.dnetlib.pace.common.AbstractPaceFunctions;
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.distance.eval.ConditionEvalMap;
 import eu.dnetlib.pace.model.Document;
@@ -17,15 +16,25 @@ import eu.dnetlib.pace.model.FieldDef;
  */
 public abstract class AbstractCondition extends AbstractPaceFunctions implements ConditionAlgo {
 
-	protected Cond cond;
+	protected String cond;
 
 	protected List<FieldDef> fields;
 
-	public AbstractCondition(final Cond cond, final List<FieldDef> fields) {
+	public AbstractCondition(final String cond, final List<FieldDef> fields) {
 		this.cond = cond;
 		this.fields = fields;
 	}
 
+	public AbstractCondition(){}
+
+	public void setCond(String cond){
+		this.cond = cond;
+	}
+
+	public void setFields(List<FieldDef> fields){
+		this.fields = fields;
+	}
+
 	protected abstract ConditionEval verify(FieldDef fd, Field a, Field b);
 
 	@Override

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/AlwaysTrueCondition.java

@@ -1,7 +1,6 @@
 package eu.dnetlib.pace.condition;
 
 import java.util.List;
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
@@ -11,12 +10,16 @@ import eu.dnetlib.pace.model.FieldDef;
  *
  * @author claudio
  */
+@ConditionClass("alwaystruecondition")
 public class AlwaysTrueCondition extends AbstractCondition {
 
-	public AlwaysTrueCondition(final Cond cond, final List<FieldDef> fields) {
+	public AlwaysTrueCondition(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 
+	public AlwaysTrueCondition(){
+		super();
+	}
 	@Override
 	protected ConditionEval verify(final FieldDef fd, final Field a, final Field b) {
 		return new ConditionEval(cond, a, b, 1);

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/ConditionAlgo.java

@@ -1,9 +1,9 @@
 package eu.dnetlib.pace.condition;
 
-import java.util.Map;
+import java.util.List;
-
 import eu.dnetlib.pace.distance.eval.ConditionEvalMap;
 import eu.dnetlib.pace.model.Document;
+import eu.dnetlib.pace.model.FieldDef;
 
 /**
  * Allows to express general conditions to be satisfied or not between two Documents.
@@ -24,4 +24,7 @@ public interface ConditionAlgo {
 	 */
 	public abstract ConditionEvalMap verify(Document a, Document b);
 
+	public void setFields(List<FieldDef> fields);
+	public void setCond(String name);
+
 }

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/ConditionClass.java

@@ -0,0 +1,13 @@
+package eu.dnetlib.pace.condition;
+
+import java.lang.annotation.ElementType;
+import java.lang.annotation.Retention;
+import java.lang.annotation.RetentionPolicy;
+import java.lang.annotation.Target;
+
+@Retention(RetentionPolicy.RUNTIME)
+@Target(ElementType.TYPE)
+public @interface ConditionClass {
+
+    public String value();
+}

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/ConditionResolver.java

@@ -0,0 +1,22 @@
+package eu.dnetlib.pace.condition;
+
+import java.io.Serializable;
+import java.util.Map;
+import java.util.stream.Collectors;
+
+import org.reflections.Reflections;
+
+public class ConditionResolver implements Serializable {
+    private final Map<String, Class<ConditionAlgo>> functionMap;
+
+    public ConditionResolver() {
+
+        this.functionMap = new Reflections("eu.dnetlib").getTypesAnnotatedWith(ConditionClass.class).stream()
+                .filter(ConditionAlgo.class::isAssignableFrom)
+                .collect(Collectors.toMap(cl -> cl.getAnnotation(ConditionClass.class).value(), cl -> (Class<ConditionAlgo>)cl));
+    }
+
+    public ConditionAlgo resolve(String name) throws IllegalAccessException, InstantiationException {
+        return functionMap.get(name).newInstance();
+    }
+}

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/DoiExactMatch.java

@@ -2,7 +2,6 @@ package eu.dnetlib.pace.condition;
 
 import java.util.List;
 
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
 
@@ -11,11 +10,12 @@ import eu.dnetlib.pace.model.FieldDef;
  *
  * @author claudio
  */
+@ConditionClass("doiExactMatch")
 public class DoiExactMatch extends ExactMatchIgnoreCase {
 
 	public final String PREFIX = "(http:\\/\\/dx\\.doi\\.org\\/)|(doi:)";
 
-	public DoiExactMatch(final Cond cond, final List<FieldDef> fields) {
+	public DoiExactMatch(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/ExactMatch.java

@@ -2,7 +2,6 @@ package eu.dnetlib.pace.condition;
 
 import java.util.List;
 
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
@@ -13,12 +12,17 @@ import org.apache.commons.lang.StringUtils;
  *
  * @author claudio
  */
+@ConditionClass("exactMatch")
 public class ExactMatch extends AbstractCondition {
 
-	public ExactMatch(final Cond cond, final List<FieldDef> fields) {
+	public ExactMatch(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 
+	public ExactMatch(){
+		super();
+	}
+
 	@Override
 	protected ConditionEval verify(final FieldDef fd, final Field a, final Field b) {
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/ExactMatchIgnoreCase.java

@@ -2,7 +2,6 @@ package eu.dnetlib.pace.condition;
 
 import java.util.List;
 
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
@@ -12,9 +11,10 @@ import eu.dnetlib.pace.model.FieldDef;
  *
  * @author claudio
  */
+@ConditionClass("exactMatchIgnoreCase")
 public class ExactMatchIgnoreCase extends AbstractCondition {
 
-	public ExactMatchIgnoreCase(final Cond cond, final List<FieldDef> fields) {
+	public ExactMatchIgnoreCase(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/MustBeDifferent.java

@@ -3,7 +3,6 @@ package eu.dnetlib.pace.condition;
 import java.util.List;
 
 import com.google.common.collect.Iterables;
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
@@ -13,6 +12,7 @@ import eu.dnetlib.pace.model.FieldDef;
  *
  * @author claudio
  */
+@ConditionClass("mustBeDifferent")
 public class MustBeDifferent extends AbstractCondition {
 
 	/**
@@ -20,7 +20,7 @@ public class MustBeDifferent extends AbstractCondition {
 	 *
 	 * @param fields the fields
 	 */
-	public MustBeDifferent(final Cond cond, final List<FieldDef> fields) {
+	public MustBeDifferent(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/PidMatch.java

@@ -6,7 +6,6 @@ import java.util.Set;
 import java.util.stream.Collectors;
 
 import com.google.common.collect.Sets;
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
@@ -20,11 +19,12 @@ import org.apache.commons.logging.LogFactory;
  *
  * @author claudio
  */
+@ConditionClass("pidMatch")
 public class PidMatch extends AbstractCondition {
 
 	private static final Log log = LogFactory.getLog(PidMatch.class);
 
-	public PidMatch(final Cond cond, final List<FieldDef> fields) {
+	public PidMatch(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/SizeMatch.java

@@ -4,7 +4,6 @@ import java.util.List;
 
 import com.google.common.collect.Iterables;
 
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
@@ -14,6 +13,7 @@ import eu.dnetlib.pace.model.FieldDef;
  *
  * @author claudio
  */
+@ConditionClass("sizeMatch")
 public class SizeMatch extends AbstractCondition {
 
 	/**
@@ -22,7 +22,7 @@ public class SizeMatch extends AbstractCondition {
 	 * @param fields
 	 *            the fields
 	 */
-	public SizeMatch(final Cond cond, final List<FieldDef> fields) {
+	public SizeMatch(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/TitleVersionMatch.java

@@ -2,7 +2,6 @@ package eu.dnetlib.pace.condition;
 
 import java.util.List;
 
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
@@ -13,9 +12,10 @@ import eu.dnetlib.pace.model.FieldDef;
  * @author claudio
  *
  */
+@ConditionClass("titleVersionMatch")
 public class TitleVersionMatch extends AbstractCondition {
 
-	public TitleVersionMatch(final Cond cond, final List<FieldDef> fields) {
+	public TitleVersionMatch(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/condition/YearMatch.java

@@ -1,8 +1,8 @@
 package eu.dnetlib.pace.condition;
 
+import java.time.Year;
 import java.util.List;
 
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.distance.eval.ConditionEval;
 import org.apache.commons.lang.StringUtils;
 
@@ -14,14 +14,17 @@ import eu.dnetlib.pace.model.FieldDef;
  *
  * @author claudio
  */
+@ConditionClass("yearMatch")
 public class YearMatch extends AbstractCondition {
 
 	private int limit = 4;
 
-	public YearMatch(final Cond cond, final List<FieldDef> fields) {
+	public YearMatch(final String cond, final List<FieldDef> fields) {
 		super(cond, fields);
 	}
 
+	public YearMatch(){}
+
 	// @Override
 	// public boolean verify(final Document a, final Document b) {
 	// boolean res = true;

dnet-pace-core/src/main/java/eu/dnetlib/pace/config/Algo.java

@@ -1,46 +0,0 @@
-package eu.dnetlib.pace.config;
-
-/**
- * Enumerates the distance Algos.
- */
-public enum Algo {
-
-	/** The Jaro winkler. */
-	JaroWinkler,
-	/** The Jaro winkler title. */
-	JaroWinklerTitle,
-	/** The Levenstein. */
-	Levenstein,
-	/** The Levenstein distance for title matching */
-	LevensteinTitle,
-	/** The Level2 jaro winkler. */
-	Level2JaroWinkler,
-	/** The Level2 jaro winkler for title matching */
-	Level2JaroWinklerTitle,
-	/** The Level2 levenstein. */
-	Level2Levenstein,
-	/** The Sub string levenstein. */
-	SubStringLevenstein,
-	/** The Year levenstein. */
-	YearLevenstein,
-	/** The Sorted jaro winkler. */
-	SortedJaroWinkler,
-	/** The Sorted level2 jaro winkler. */
-	SortedLevel2JaroWinkler,
-	/** Compares two urls */
-	urlMatcher,
-	/** Exact match algo. */
-	ExactMatch,
-	/**
-	 * Returns 0 for equal strings, 1 for different strings.
-	 */
-	MustBeDifferent,
-	/** Always return 1.0 as distance. */
-	AlwaysMatch,
-	/** Person distance */
-	PersonCoAuthorSurnamesDistance,
-	PersonCoAnchorsDistance,
-	PersonDistance,
-	/** The Null. */
-	Null
-}

dnet-pace-core/src/main/java/eu/dnetlib/pace/config/Cond.java

@@ -1,28 +0,0 @@
-package eu.dnetlib.pace.config;
-
-/**
- * The Enum Cond.
- */
-public enum Cond {
-
-	/** The year match. */
-	yearMatch,
-	/** The title version match. */
-	titleVersionMatch,
-	/** The size match. */
-	sizeMatch,
-	/**
-	 * Returns true if the field values are different
-	 */
-	mustBeDifferent,
-	/** The Exact match. */
-	exactMatch,
-	/**
-	 * The Exact match ignore case.
-	 */
-	exactMatchIgnoreCase,
-	/** The Exact match specialized to recognize DOI values. */
-	doiExactMatch,
-	/** The Exact match that checks if pid type and value are the same */
-	pidMatch
-}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/DistanceAlgo.java

@@ -2,6 +2,8 @@ package eu.dnetlib.pace.distance;
 
 import eu.dnetlib.pace.model.Field;
 
+import java.util.Map;
+
 /**
  * Each field is configured with a distance algo which knows how to compute the distance (0-1) between the fields of two
  * objects.
@@ -11,5 +13,9 @@ public interface DistanceAlgo {
 	public abstract double distance(Field a, Field b);
 
 	public double getWeight();
+	public Map<String, Number> getParams();
+
+	public void setWeight(double w);
+	public void setParams(Map<String, Number> params);
 
 }

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/DistanceClass.java

@@ -0,0 +1,13 @@
+package eu.dnetlib.pace.distance;
+
+import java.lang.annotation.ElementType;
+import java.lang.annotation.Retention;
+import java.lang.annotation.RetentionPolicy;
+import java.lang.annotation.Target;
+
+@Retention(RetentionPolicy.RUNTIME)
+@Target(ElementType.TYPE)
+public @interface DistanceClass {
+
+    public String value();
+}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/DistanceResolver.java

@@ -0,0 +1,24 @@
+package eu.dnetlib.pace.distance;
+
+import java.io.Serializable;
+import java.lang.reflect.InvocationTargetException;
+import java.util.Map;
+import java.util.stream.Collectors;
+
+import org.reflections.Reflections;
+
+public class DistanceResolver implements Serializable {
+    private final Map<String, Class<DistanceAlgo>> functionMap;
+
+    public DistanceResolver() {
+
+        this.functionMap = new Reflections("eu.dnetlib").getTypesAnnotatedWith(DistanceClass.class).stream()
+                .filter(DistanceAlgo.class::isAssignableFrom)
+                .collect(Collectors.toMap(cl -> cl.getAnnotation(DistanceClass.class).value(), cl -> (Class<DistanceAlgo>)cl));
+    }
+
+    public DistanceAlgo resolve(String algo) throws IllegalAccessException, InstantiationException {
+
+        return functionMap.get(algo).newInstance();
+    }
+}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/DistanceScorer.java

@@ -25,7 +25,7 @@ public class DistanceScorer {
 	}
 
 	public ScoreResult distance(final Document a, final Document b) {
-		final ScoreResult sr = new ScoreResult();
+		final ScoreResult sr = new ScoreResult();	//to keep track of the result of the comparison
 
 		sr.setStrictConditions(verify(a, b, config.strictConditions()));
 		sr.setConditions(verify(a, b, config.conditions()));

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/SecondStringDistanceAlgo.java

@@ -1,6 +1,8 @@
 package eu.dnetlib.pace.distance;
 
+import java.io.Serializable;
 import java.util.List;
+import java.util.Map;
 
 import com.wcohen.ss.AbstractStringDistance;
 
@@ -24,6 +26,27 @@ public abstract class SecondStringDistanceAlgo extends AbstractPaceFunctions imp
 	/** The weight. */
 	protected double weight = 0.0;
 
+	private Map<String, Number> params;
+
+	protected SecondStringDistanceAlgo(){
+	}
+
+	protected SecondStringDistanceAlgo(Map<String, Number> params){
+		this.params = params;
+	}
+
+	public void setWeight(double w){
+		this.weight = w;
+	}
+
+	public Map<String, Number> getParams(){
+		return this.params;
+	}
+
+	public void setParams(Map<String, Number> params){
+		this.params = params;
+	}
+
 	/**
 	 * Instantiates a new second string distance algo.
 	 * 
@@ -37,6 +60,10 @@ public abstract class SecondStringDistanceAlgo extends AbstractPaceFunctions imp
 		this.weight = weight;
 	}
 
+	protected SecondStringDistanceAlgo(final AbstractStringDistance ssalgo){
+		this.ssalgo = ssalgo;
+	}
+
 	/**
 	 * Normalize.
 	 * 

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/AlwaysMatch.java

@@ -1,10 +1,22 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+import java.util.Map;
+
+@DistanceClass("AlwaysMatch")
 public class AlwaysMatch extends SecondStringDistanceAlgo {
 
+	public AlwaysMatch(){
+		super();
+	}
+
+	public AlwaysMatch(final Map<String, Number> params){
+		super(params);
+	}
+
 	public AlwaysMatch(final double weight) {
 		super(weight, new com.wcohen.ss.JaroWinkler());
 	}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/ExactMatch.java

@@ -1,10 +1,22 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+import java.util.Map;
+
+@DistanceClass("ExactMatch")
 public class ExactMatch extends SecondStringDistanceAlgo {
 
+	public ExactMatch(){
+		super();
+	}
+
+	public ExactMatch(Map<String, Number> params){
+		super(params);
+	}
+
 	public ExactMatch(final double weight) {
 		super(weight, new com.wcohen.ss.JaroWinkler());
 	}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/JaroWinkler.java

@@ -1,11 +1,23 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+import java.util.Map;
+
 //case class JaroWinkler(w: Double) extends SecondStringDistanceAlgo(w, new com.wcohen.ss.JaroWinkler())
+@DistanceClass("JaroWinkler")
 public class JaroWinkler extends SecondStringDistanceAlgo {
 
+	public JaroWinkler(){
+		super();
+	}
+
+	public JaroWinkler(Map<String, Number> params){
+		super(params);
+	}
+
 	public JaroWinkler(double weight) {
 		super(weight, new com.wcohen.ss.JaroWinkler());
 	}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/JaroWinklerTitle.java

@@ -1,11 +1,23 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+import java.util.Map;
+
 //case class JaroWinkler(w: Double) extends SecondStringDistanceAlgo(w, new com.wcohen.ss.JaroWinkler())
+@DistanceClass("JaroWinklerTitle")
 public class JaroWinklerTitle extends SecondStringDistanceAlgo {
 
+	public JaroWinklerTitle(){
+		super();
+	}
+
+	public JaroWinklerTitle(Map<String, Number> params){
+		super(params);
+	}
+
 	public JaroWinklerTitle(double weight) {
 		super(weight, new com.wcohen.ss.JaroWinkler());
 	}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/Level2JaroWinkler.java

@@ -1,8 +1,10 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+@DistanceClass("Level2JaroWinkler")
 public class Level2JaroWinkler extends SecondStringDistanceAlgo {
 
 	public Level2JaroWinkler(double w) {

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/Level2JaroWinklerTitle.java

@@ -1,8 +1,10 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+@DistanceClass("Level2JaroWinklerTitle")
 public class Level2JaroWinklerTitle extends SecondStringDistanceAlgo {
 
 	public Level2JaroWinklerTitle(final double w) {

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/Level2Levenstein.java

@@ -1,8 +1,10 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+@DistanceClass("Level2Levenstein")
 public class Level2Levenstein extends SecondStringDistanceAlgo {
 
 	public Level2Levenstein(double w) {

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/Levenstein.java

@@ -1,10 +1,16 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+@DistanceClass("Levenstein")
 public class Levenstein extends SecondStringDistanceAlgo {
 
+	public Levenstein(){
+		super(new com.wcohen.ss.Levenstein());
+	}
+
 	public Levenstein(double w) {
 		super(w, new com.wcohen.ss.Levenstein());
 	}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/LevensteinTitle.java

@@ -1,10 +1,16 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+@DistanceClass("LevensteinTitle")
 public class LevensteinTitle extends SecondStringDistanceAlgo {
 
+	public LevensteinTitle(){
+		super(new com.wcohen.ss.Levenstein());
+	}
+
 	public LevensteinTitle(final double w) {
 		super(w, new com.wcohen.ss.Levenstein());
 	}

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/MustBeDifferent.java

@@ -1,8 +1,10 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 
+@DistanceClass("MustBeDifferent")
 public class MustBeDifferent extends SecondStringDistanceAlgo {
 
 	public MustBeDifferent(final double weight) {

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/NullDistanceAlgo.java

@@ -1,12 +1,16 @@
 package eu.dnetlib.pace.distance.algo;
 
 import eu.dnetlib.pace.distance.DistanceAlgo;
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.model.Field;
 
+import java.util.Map;
+
 /**
  * Not all fields of a document need to partecipate in the distance measure. We model those fields as having a
  * NullDistanceAlgo.
  */
+@DistanceClass("Null")
 public class NullDistanceAlgo implements DistanceAlgo {
 
 	@Override
@@ -19,4 +23,16 @@ public class NullDistanceAlgo implements DistanceAlgo {
 		return 0.0;
 	}
 
+	@Override
+	public void setWeight(double w){
+	}
+
+	@Override
+	public Map<String, Number> getParams() {
+		return null;
+	}
+
+	@Override
+	public void setParams(Map<String, Number> params) {
+	}
 }

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/SortedJaroWinkler.java

@@ -1,10 +1,12 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 
 /**
  * The Class SortedJaroWinkler.
  */
+@DistanceClass("SortedJaroWinkler")
 public class SortedJaroWinkler extends SortedSecondStringDistanceAlgo {
 
 	/**

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/SortedLevel2JaroWinkler.java

@@ -1,10 +1,12 @@
 package eu.dnetlib.pace.distance.algo;
 
 import com.wcohen.ss.AbstractStringDistance;
+import eu.dnetlib.pace.distance.DistanceClass;
 
 /**
  * The Class SortedJaroWinkler.
  */
+@DistanceClass("Sorted2JaroWinkler")
 public class SortedLevel2JaroWinkler extends SortedSecondStringDistanceAlgo {
 
 	/**

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/SubStringLevenstein.java

@@ -1,5 +1,6 @@
 package eu.dnetlib.pace.distance.algo;
 
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.distance.SecondStringDistanceAlgo;
 import org.apache.commons.lang.StringUtils;
 
@@ -8,14 +9,21 @@ import com.wcohen.ss.AbstractStringDistance;
 import eu.dnetlib.pace.config.Type;
 import eu.dnetlib.pace.model.Field;
 
+import java.util.Map;
+
 /**
  * The Class SubStringLevenstein.
  */
+@DistanceClass("SubStringLevenstein")
 public class SubStringLevenstein extends SecondStringDistanceAlgo {
 
 	/** The limit. */
 	protected int limit;
 
+	public SubStringLevenstein() {
+		super(new com.wcohen.ss.Levenstein());
+	}
+
 	/**
 	 * Instantiates a new sub string levenstein.
 	 * 
@@ -87,4 +95,9 @@ public class SubStringLevenstein extends SecondStringDistanceAlgo {
 		return 1 / Math.pow(Math.abs(d) + 1, 0.1);
 	}
 
+	public void setParams(Map<String, Number> params){
+		this.limit = params.get("limit").intValue();	//necessary because this class needs also the limit
+		super.setParams(params);
+	}
+
 }

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/algo/UrlMatcher.java

@@ -1,5 +1,6 @@
 package eu.dnetlib.pace.distance.algo;
 
+import eu.dnetlib.pace.distance.DistanceClass;
 import eu.dnetlib.pace.model.Field;
 import org.apache.commons.lang.StringUtils;
 
@@ -7,15 +8,24 @@ import java.net.MalformedURLException;
 import java.net.URL;
 import java.util.Map;
 
+@DistanceClass("urlMatcher")
 public class UrlMatcher extends Levenstein {
 
     private Map<String, Number> params;
 
+    public UrlMatcher(){
+        super();
+    }
+
     public UrlMatcher(double weight, Map<String, Number> params) {
         super(weight);
         this.params = params;
     }
 
+    public void setParams(Map<String, Number> params) {
+        this.params = params;
+    }
+
     @Override
     public double distance(Field a, Field b) {
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/eval/ConditionEval.java

@@ -1,6 +1,5 @@
 package eu.dnetlib.pace.distance.eval;
 
-import eu.dnetlib.pace.config.Cond;
 import eu.dnetlib.pace.model.Field;
 
 /**
@@ -8,7 +7,7 @@ import eu.dnetlib.pace.model.Field;
  */
 public class ConditionEval {
 
-	private Cond cond;
+	private String cond;
 
 	private Field a;
 
@@ -16,7 +15,7 @@ public class ConditionEval {
 
 	private int result;
 
-	public ConditionEval(final Cond cond, final Field a, final Field b, final int result) {
+	public ConditionEval(final String cond, final Field a, final Field b, final int result) {
 		this.cond = cond;
 		this.a = a;
 		this.b = b;
@@ -47,11 +46,11 @@ public class ConditionEval {
 		this.result = result;
 	}
 
-	public Cond getCond() {
+	public String getCond() {
 		return cond;
 	}
 
-	public void setCond(final Cond cond) {
+	public void setCond(final String cond) {
 		this.cond = cond;
 	}
 }

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/eval/DistanceEval.java

@@ -1,6 +1,5 @@
 package eu.dnetlib.pace.distance.eval;
 
-import eu.dnetlib.pace.config.Algo;
 import eu.dnetlib.pace.model.Field;
 import eu.dnetlib.pace.model.FieldDef;
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/distance/eval/ScoreResult.java

@@ -2,10 +2,12 @@ package eu.dnetlib.pace.distance.eval;
 
 import com.google.gson.GsonBuilder;
 
+import java.io.Serializable;
+
 /**
  * Created by claudio on 09/03/16.
  */
-public class ScoreResult {
+public class ScoreResult implements Serializable {
 
 	private ConditionEvalMap strictConditions;
 
@@ -49,8 +51,12 @@ public class ScoreResult {
 
 	@Override
 	public String toString() {
-		final GsonBuilder b = new GsonBuilder();
+		//TODO cannot print: why?
-		b.serializeSpecialFloatingPointValues();
+//		final GsonBuilder b = new GsonBuilder()
-		return b.setPrettyPrinting().create().toJson(this);
+//			.serializeSpecialFloatingPointValues()
+//				.serializeNulls();
+//
+//		return b.setPrettyPrinting().create().toJson(this);
+		return "{}";
 	}
 }

dnet-pace-core/src/main/java/eu/dnetlib/pace/model/ClusteringDef.java

@@ -1,6 +1,7 @@
 package eu.dnetlib.pace.model;
 
 import java.io.Serializable;
+import java.lang.reflect.InvocationTargetException;
 import java.util.List;
 import java.util.Map;
 
@@ -9,49 +10,36 @@ import eu.dnetlib.pace.clustering.*;
 
 public class ClusteringDef implements Serializable {
 
-	private Clustering name;
+	private String name;
 
 	private List<String> fields;
 
 	private Map<String, Integer> params;
 
+	private ClusteringResolver clusteringResolver = new ClusteringResolver();
+
 	public ClusteringDef() {}
 
-	public Clustering getName() {
+	public String getName() {
 		return name;
 	}
 
-	public void setName(final Clustering name) {
+	public void setName(final String name) {
 		this.name = name;
 	}
 
 	public ClusteringFunction getClusteringFunction() {
-		switch (getName()) {
+
-		case acronyms:
+		try {
-			return new Acronyms(getParams());
+			ClusteringFunction clusteringFunction = clusteringResolver.resolve(getName());
-		case ngrams:
+			clusteringFunction.setParams(params);
-			return new Ngrams(getParams());
+			return clusteringFunction;
-		case ngrampairs:
+
-			return new NgramPairs(getParams());
+		} catch (IllegalAccessException | InstantiationException | NoSuchMethodException | InvocationTargetException e) {
-		case sortedngrampairs:
+			e.printStackTrace();
-			return new SortedNgramPairs(getParams());
-		case suffixprefix:
-			return new SuffixPrefix(getParams());
-		case spacetrimmingfieldvalue:
-			return new SpaceTrimmingFieldValue(getParams());
-		case immutablefieldvalue:
-			return new ImmutableFieldValue(getParams());
-		case personhash:
-			return new PersonHash(getParams());
-		case personclustering:
-			return new PersonClustering(getParams());
-		case lowercase:
-			return new LowercaseClustering(getParams());
-		case urlclustering:
-			return new UrlClustering(getParams());
-		default:
 			return new RandomClusteringFunction(getParams());
 		}
+
 	}
 
 	public List<String> getFields() {

dnet-pace-core/src/main/java/eu/dnetlib/pace/model/CondDef.java

@@ -5,44 +5,36 @@ import java.util.List;
 
 import com.google.gson.Gson;
 import eu.dnetlib.pace.condition.*;
-import eu.dnetlib.pace.config.Cond;
 
 public class CondDef implements Serializable {
 
-	private Cond name;
+	private String name;
 
 	private List<String> fields;
 
+	private ConditionResolver conditionResolver = new ConditionResolver();
+
 	public CondDef() {}
 
 	public ConditionAlgo getConditionAlgo(final List<FieldDef> fields) {
-		switch (getName()) {
+
-		case yearMatch:
+		try {
-			return new YearMatch(getName(), fields);
+			ConditionAlgo conditionAlgo = conditionResolver.resolve(getName());
-		case titleVersionMatch:
+			conditionAlgo.setFields(fields);
-			return new TitleVersionMatch(getName(), fields);
+			conditionAlgo.setCond(getName());
-		case sizeMatch:
+			return conditionAlgo;
-			return new SizeMatch(getName(), fields);
+		} catch (IllegalAccessException | InstantiationException e) {
-		case exactMatch:
+			e.printStackTrace();
-			return new ExactMatch(getName(), fields);
-		case mustBeDifferent:
-			return new MustBeDifferent(getName(), fields);
-		case exactMatchIgnoreCase:
-			return new ExactMatchIgnoreCase(getName(), fields);
-		case doiExactMatch:
-			return new DoiExactMatch(getName(), fields);
-		case pidMatch:
-			return new PidMatch(getName(), fields);
-		default:
 			return new AlwaysTrueCondition(getName(), fields);
 		}
+
 	}
 
-	public Cond getName() {
+	public String getName() {
 		return name;
 	}
 
-	public void setName(final Cond name) {
+	public void setName(final String name) {
 		this.name = name;
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/model/FieldDef.java

@@ -1,13 +1,13 @@
 package eu.dnetlib.pace.model;
 
 import java.io.Serializable;
+import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
 
 import com.google.common.base.Splitter;
 import com.google.common.collect.Lists;
 import com.google.gson.Gson;
-import eu.dnetlib.pace.config.Algo;
 import eu.dnetlib.pace.config.Type;
 import eu.dnetlib.pace.distance.*;
 import eu.dnetlib.pace.distance.algo.*;
@@ -19,7 +19,7 @@ public class FieldDef implements Serializable {
 
 	public final static String PATH_SEPARATOR = "/";
 
-	private Algo algo;
+	private String algo;
 
 	private String name;
 
@@ -37,6 +37,8 @@ public class FieldDef implements Serializable {
 
 	private Map<String, Number> params;
 
+	private DistanceResolver distanceResolver = new DistanceResolver();
+
 	public FieldDef() {}
 
 	// def apply(s: String): Field[A]
@@ -66,40 +68,22 @@ public class FieldDef implements Serializable {
 	}
 
 	public DistanceAlgo getDistanceAlgo() {
-		switch (getAlgo()) {
+
-		case JaroWinkler:
+		try {
-			return new JaroWinkler(getWeight());
+			if (params == null) {
-		case JaroWinklerTitle:
+				params = new HashMap<>();
-			return new JaroWinklerTitle(getWeight());
+			}
-		case Level2JaroWinkler:
+			params.put("limit", getLimit());
-			return new Level2JaroWinkler(getWeight());
+			params.put("weight", getWeight());
-		case Level2JaroWinklerTitle:
+			DistanceAlgo distanceAlgo = distanceResolver.resolve(getAlgo());
-			return new Level2JaroWinklerTitle(getWeight());
+			distanceAlgo.setParams(params);
-		case Level2Levenstein:
+			distanceAlgo.setWeight(getWeight());
-			return new Level2Levenstein(getWeight());
+			return distanceAlgo;
-		case Levenstein:
+		} catch (IllegalAccessException | InstantiationException e) {
-			return new Levenstein(getWeight());
+			e.printStackTrace();
-		case LevensteinTitle:
-			return new LevensteinTitle(getWeight());
-		case SubStringLevenstein:
-			return new SubStringLevenstein(getWeight(), getLimit());
-		case SortedJaroWinkler:
-			return new SortedJaroWinkler(getWeight());
-		case SortedLevel2JaroWinkler:
-			return new SortedLevel2JaroWinkler(getWeight());
-		case urlMatcher:
-			return new UrlMatcher(getWeight(), getParams());
-		case ExactMatch:
-			return new ExactMatch(getWeight());
-		case MustBeDifferent:
-			return new MustBeDifferent(getWeight());
-		case AlwaysMatch:
-			return new AlwaysMatch(getWeight());
-		case Null:
-			return new NullDistanceAlgo();
-		default:
 			return new NullDistanceAlgo();
 		}
+
 	}
 
 	public boolean isIgnoreMissing() {
@@ -135,11 +119,11 @@ public class FieldDef implements Serializable {
 		this.weight = weight;
 	}
 
-	public Algo getAlgo() {
+	public String getAlgo() {
 		return algo;
 	}
 
-	public void setAlgo(final Algo algo) {
+	public void setAlgo(final String algo) {
 		this.algo = algo;
 	}
 

dnet-pace-core/src/main/java/eu/dnetlib/pace/util/BlockProcessor.java

@@ -23,7 +23,6 @@ public class BlockProcessor {
 
     private DedupConfig dedupConf;
 
-
     public static void constructAccumulator( final DedupConfig dedupConf) {
         accumulators.add(String.format("%s::%s",dedupConf.getWf().getEntityType(), "records per hash key = 1"));
         accumulators.add(String.format("%s::%s",dedupConf.getWf().getEntityType(), "missing " + dedupConf.getWf().getOrderField()));