forked from D-Net/dnet-hadoop
code cleanup
This commit is contained in:
parent
67a5aa0a38
commit
07f634a46d
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@ -58,7 +58,7 @@ select distinct r.id, (case when lic='' or lic is null then 0 else 1 end) as has
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from ${stats_db_name}.result r
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left outer join (select r.id, license.type as lic from ${stats_db_name}.result r
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join ${stats_db_name}.result_licenses as license on license.id = r.id
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where lower(license.type) LIKE '%creativecommons.org%' OR lower(license.type) LIKE '%cc-%') tmp
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where lower(license.type) LIKE '%creativecommons.org%' OR lower(license.type) LIKE '%cc %') tmp
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on r.id= tmp.id; /*EOS*/
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drop table if exists ${stats_db_name}.indi_result_has_cc_licence_url purge; /*EOS*/
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@ -130,7 +130,7 @@ from tmp as o1 join tmp as o2 on o1.id=o2.id
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where o1.id=o2.id and o1.country!=o2.country
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group by o1.organization, o1.id, o1.name, o2.country; /*EOS*/
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drop table if exists tmp purge; /*EOS*/
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DROP VIEW if exists tmp; /*EOS*/
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create TEMPORARY VIEW tmp AS
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select o.id organization, o.name, ro.project as project from ${stats_db_name}.organization o
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@ -195,48 +195,40 @@ DROP VIEW if exists tmp; /*EOS*/
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---- Sprint 4 ----
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drop table if exists ${stats_db_name}.indi_pub_diamond purge; /*EOS*/
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--create table if not exists ${stats_db_name}.indi_pub_diamond stored as parquet as
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--select distinct pd.id, coalesce(in_diamond_journal, 0) as in_diamond_journal
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--from ${stats_db_name}.publication_datasources pd
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-- left outer join (
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-- select pd.id, 1 as in_diamond_journal from ${stats_db_name}.publication_datasources pd
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-- join ${stats_db_name}.datasource d on d.id=pd.datasource
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-- join STATS_EXT.plan_s_jn ps where (ps.issn_print=d.issn_printed and ps.issn_online=d.issn_online)
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-- and (ps.journal_is_in_doaj=true or ps.journal_is_oa=true) and ps.has_apc=false) tmp
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-- on pd.id=tmp.id;
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create table if not exists ${stats_db_name}.indi_pub_diamond stored as parquet as
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select distinct pd.id, coalesce(in_diamond_journal, 0) as in_diamond_journal
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from ${stats_db_name}.publication_datasources pd
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left outer join (select pd.id, 1 as in_diamond_journal from ${stats_db_name}.publication_datasources pd
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join ${stats_db_name}.datasource d on d.id=pd.datasource
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join STATS_EXT.plan_s_jn ps where (ps.issn_print=d.issn_printed and ps.issn_online=d.issn_online)
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and (ps.journal_is_in_doaj=true or ps.journal_is_oa=true) and ps.has_apc=false) tmp
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on pd.id=tmp.id; /*EOS*/
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left outer join (
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select pd.id, 1 as in_diamond_journal
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from ${stats_db_name}.publication_datasources pd
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join ${stats_db_name}.datasource d on d.id=pd.datasource
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join STATS_EXT.plan_s_jn ps where (ps.issn_print=d.issn_printed and ps.issn_online=d.issn_online)
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and (ps.journal_is_in_doaj=true or ps.journal_is_oa=true) and ps.has_apc=false) tmp on pd.id=tmp.id; /*EOS*/
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drop table if exists ${stats_db_name}.indi_pub_in_transformative purge; /*EOS*/
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create table if not exists ${stats_db_name}.indi_pub_in_transformative stored as parquet as
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select distinct pd.id, coalesce(is_transformative, 0) as is_transformative
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from ${stats_db_name}.publication pd
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left outer join (
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select pd.id, 1 as is_transformative from ${stats_db_name}.publication_datasources pd
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join ${stats_db_name}.datasource d on d.id=pd.datasource
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join STATS_EXT.plan_s_jn ps where (ps.issn_print=d.issn_printed and ps.issn_online=d.issn_online)
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and ps.is_transformative_journal=true) tmp
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on pd.id=tmp.id; /*EOS*/
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left outer join (
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select pd.id, 1 as is_transformative
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from ${stats_db_name}.publication_datasources pd
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join ${stats_db_name}.datasource d on d.id=pd.datasource
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join STATS_EXT.plan_s_jn ps where (ps.issn_print=d.issn_printed and ps.issn_online=d.issn_online)
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and ps.is_transformative_journal=true) tmp on pd.id=tmp.id; /*EOS*/
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drop table if exists ${stats_db_name}.indi_pub_closed_other_open purge; /*EOS*/
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create table if not exists ${stats_db_name}.indi_pub_closed_other_open stored as parquet as
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select distinct ri.id, coalesce(pub_closed_other_open, 0) as pub_closed_other_open from ${stats_db_name}.result_instance ri
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left outer join
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(select ri.id, 1 as pub_closed_other_open from ${stats_db_name}.result_instance ri
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join ${stats_db_name}.publication p on p.id=ri.id
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join ${stats_db_name}.datasource d on ri.hostedby=d.id
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where d.type like '%Journal%' and ri.accessright='Closed Access' and
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(p.bestlicence='Open Access' or p.bestlicence='Open Source')) tmp
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on tmp.id=ri.id; /*EOS*/
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select distinct ri.id, coalesce(pub_closed_other_open, 0) as pub_closed_other_open
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from ${stats_db_name}.result_instance ri
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left outer join (
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select ri.id, 1 as pub_closed_other_open
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from ${stats_db_name}.result_instance ri
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join ${stats_db_name}.publication p on p.id=ri.id
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join ${stats_db_name}.datasource d on ri.hostedby=d.id
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where d.type like '%Journal%' and ri.accessright='Closed Access' and
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(p.bestlicence='Open Access' or p.bestlicence='Open Source')) tmp on tmp.id=ri.id; /*EOS*/
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---- Sprint 5 ----
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drop table if exists ${stats_db_name}.indi_result_no_of_copies purge; /*EOS*/
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@ -284,77 +276,6 @@ GROUP BY result_id, repository_id, substring(us.`date`, 1,4); /*EOS*/
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---- Sprint 7 ----
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drop table if exists ${stats_db_name}.indi_pub_gold_oa purge; /*EOS*/
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--create table if not exists ${stats_db_name}.indi_pub_gold_oa stored as parquet as
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-- WITH gold_oa AS ( SELECT
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-- issn_l,
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-- journal_is_in_doaj,
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-- journal_is_oa,
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-- issn_1 as issn
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-- FROM
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-- STATS_EXT.oa_journals
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-- WHERE
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-- issn_1 != ""
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-- UNION
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-- ALL SELECT
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-- issn_l,
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-- journal_is_in_doaj,
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-- journal_is_oa,
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-- issn_2 as issn
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-- FROM
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-- STATS_EXT.oa_journals
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-- WHERE
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-- issn_2 != "" ), issn AS ( SELECT
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-- *
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-- FROM
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--( SELECT
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-- id,
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-- issn_printed as issn
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-- FROM
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-- ${stats_db_name}.datasource
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-- WHERE
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-- issn_printed IS NOT NULL
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-- UNION ALL
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-- SELECT
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-- id,
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-- issn_online as issn
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-- FROM
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-- ${stats_db_name}.datasource
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-- WHERE
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-- issn_online IS NOT NULL or id like '%doajarticles%') as issn
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-- WHERE
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-- LENGTH(issn) > 7)
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--SELECT
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-- DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
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--FROM
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-- ${stats_db_name}.publication_datasources pd
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-- left outer join(
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-- select pd.id, 1 as is_gold FROM ${stats_db_name}.publication_datasources pd
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-- JOIN issn on issn.id=pd.datasource
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-- JOIN gold_oa on issn.issn = gold_oa.issn) tmp
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-- on pd.id=tmp.id;
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--create table if not exists ${stats_db_name}.indi_pub_gold_oa stored as parquet as
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--with gold_oa as (
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--SELECT issn,issn_l from stats_ext.issn_gold_oa_dataset_v5),
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--issn AS (SELECT * FROM
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--(SELECT id,issn_printed as issn FROM ${stats_db_name}.datasource
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--WHERE issn_printed IS NOT NULL
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--UNION ALL
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--SELECT id, issn_online as issn FROM ${stats_db_name}.datasource
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--WHERE issn_online IS NOT NULL or id like '%doajarticles%') as issn
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--WHERE LENGTH(issn) > 7),
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--alljournals AS(select issn, issn_l from stats_ext.alljournals
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--where journal_is_in_doaj=true or journal_is_oa=true)
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--SELECT DISTINCT pd.id, coalesce(is_gold, 0) as is_gold
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--FROM ${stats_db_name}.publication_datasources pd
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--left outer join (
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--select pd.id, 1 as is_gold FROM ${stats_db_name}.publication_datasources pd
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--JOIN issn on issn.id=pd.datasource
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--JOIN gold_oa on issn.issn = gold_oa.issn
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--join alljournals on issn.issn=alljournals.issn
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--left outer join ${stats_db_name}.result_instance ri on ri.id=pd.id
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--and ri.accessright!='Closed Access' and ri.accessright_uw='gold') tmp
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--on pd.id=tmp.id;
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create table if not exists ${stats_db_name}.indi_pub_gold_oa stored as parquet as
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with gold_oa as (
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select distinct issn from (
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@ -407,89 +328,25 @@ create table if not exists ${stats_db_name}.indi_pub_hybrid_oa_with_cc stored as
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WHERE LENGTH(issn) > 7)
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SELECT DISTINCT pd.id, coalesce(is_hybrid_oa, 0) as is_hybrid_oa
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FROM ${stats_db_name}.publication_datasources pd
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LEFT OUTER JOIN (
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LEFT OUTER JOIN (
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SELECT pd.id, 1 as is_hybrid_oa from ${stats_db_name}.publication_datasources pd
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JOIN ${stats_db_name}.datasource d on d.id=pd.datasource
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JOIN issn on issn.id=pd.datasource
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JOIN hybrid_oa ON issn.issn = hybrid_oa.issn
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JOIN ${stats_db_name}.indi_result_has_cc_licence cc on pd.id=cc.id
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JOIN ${stats_db_name}.indi_pub_gold_oa ga on pd.id=ga.id
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where cc.has_cc_license=1 and ga.is_gold=0) tmp on pd.id=tmp.id; /*EOS*/
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JOIN ${stats_db_name}.datasource d on d.id=pd.datasource
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JOIN issn on issn.id=pd.datasource
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JOIN hybrid_oa ON issn.issn = hybrid_oa.issn
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JOIN ${stats_db_name}.indi_result_has_cc_licence cc on pd.id=cc.id
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JOIN ${stats_db_name}.indi_pub_gold_oa ga on pd.id=ga.id where cc.has_cc_license=1 and ga.is_gold=0) tmp on pd.id=tmp.id; /*EOS*/
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drop table if exists ${stats_db_name}.indi_pub_hybrid purge; /*EOS*/
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--create table if not exists ${stats_db_name}.indi_pub_hybrid stored as parquet as
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-- WITH gold_oa AS ( SELECT
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-- issn_l,
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-- journal_is_in_doaj,
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-- journal_is_oa,
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-- issn_1 as issn,
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-- has_apc
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-- FROM
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-- STATS_EXT.oa_journals
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-- WHERE
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-- issn_1 != ""
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-- UNION
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-- ALL SELECT
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-- issn_l,
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-- journal_is_in_doaj,
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-- journal_is_oa,
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-- issn_2 as issn,
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-- has_apc
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-- FROM
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-- STATS_EXT.oa_journals
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-- WHERE
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-- issn_2 != "" ), issn AS ( SELECT
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-- *
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-- FROM
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--( SELECT
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-- id,
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-- issn_printed as issn
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-- FROM
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-- ${stats_db_name}.datasource
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-- WHERE
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-- issn_printed IS NOT NULL
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-- UNION ALL
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-- SELECT
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-- id,
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-- issn_online as issn
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-- FROM
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-- ${stats_db_name}.datasource
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-- WHERE
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-- issn_online IS NOT NULL or id like '%doajarticles%') as issn
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-- WHERE
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-- LENGTH(issn) > 7)
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--select distinct pd.id, coalesce(is_hybrid, 0) as is_hybrid
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--from ${stats_db_name}.publication_datasources pd
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-- left outer join (
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-- select pd.id, 1 as is_hybrid from ${stats_db_name}.publication_datasources pd
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-- join ${stats_db_name}.datasource d on d.id=pd.datasource
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-- join issn on issn.id=pd.datasource
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-- join gold_oa on issn.issn=gold_oa.issn
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-- where (gold_oa.journal_is_in_doaj=false or gold_oa.journal_is_oa=false))tmp
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-- on pd.id=tmp.id;
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--create table if not exists ${stats_db_name}.indi_pub_hybrid stored as parquet as
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--select distinct pd.id,coalesce(is_hybrid,0) is_hybrid from ${stats_db_name}.publication_datasources pd
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--left outer join (select pd.id, 1 as is_hybrid from ${stats_db_name}.publication_datasources pd
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--join ${stats_db_name}.datasource d on pd.datasource=d.id
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--join ${stats_db_name}.result_instance ri on ri.id=pd.id
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--join ${stats_db_name}.indi_pub_gold_oa indi_gold on indi_gold.id=pd.id
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--join ${stats_db_name}.result_accessroute ra on ra.id=pd.id
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--where d.type like '%Journal%' and ri.accessright!='Closed Access' and (ri.accessright_uw!='gold'
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--or indi_gold.is_gold=0) and (ra.accessroute='hybrid' or ri.license is not null)) tmp
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--on pd.id=tmp.id;
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create table if not exists ${stats_db_name}.indi_pub_hybrid stored as parquet as
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select distinct pd.id,coalesce(is_hybrid,0) is_hybrid from ${stats_db_name}.publication pd
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left outer join (select pd.id, 1 as is_hybrid from ${stats_db_name}.publication pd
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join ${stats_db_name}.result_instance ri on ri.id=pd.id
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join ${stats_db_name}.indi_pub_gold_oa indi_gold on indi_gold.id=pd.id
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join ${stats_db_name}.result_accessroute ra on ra.id=pd.id
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join ${stats_db_name}.datasource d on d.id=ri.hostedby
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where indi_gold.is_gold=0 and ((d.type like '%Journal%' and ri.accessright!='Closed Access' and ri.accessright!='Restricted' and ri.license is not null) or
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ra.accessroute='hybrid'))tmp
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on pd.id=tmp.id; /*EOS*/
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left outer join (
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select pd.id, 1 as is_hybrid from ${stats_db_name}.publication pd
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join ${stats_db_name}.result_instance ri on ri.id=pd.id
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join ${stats_db_name}.indi_pub_gold_oa indi_gold on indi_gold.id=pd.id
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join ${stats_db_name}.result_accessroute ra on ra.id=pd.id
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join ${stats_db_name}.datasource d on d.id=ri.hostedby
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where indi_gold.is_gold=0 and ((d.type like '%Journal%' and ri.accessright!='Closed Access' and ri.accessright!='Restricted' and ri.license is not null) or ra.accessroute='hybrid')) tmp on pd.id=tmp.id; /*EOS*/
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drop table if exists ${stats_db_name}.indi_org_fairness purge; /*EOS*/
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@ -534,6 +391,9 @@ select ar.organization, rf.no_result_fair/ar.no_allresults org_fairness
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from allresults ar
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join result_fair rf on rf.organization=ar.organization; /*EOS*/
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DROP VIEW result_fair;
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DROP VIEW allresults;
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CREATE TEMPORARY VIEW result_fair as
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select year, ro.organization organization, count(distinct ro.id) no_result_fair from ${stats_db_name}.result_organization ro
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join ${stats_db_name}.result p on p.id=ro.id
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@ -1201,11 +1061,10 @@ create table ${stats_db_name}.indi_pub_green_with_license stored as parquet as
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select distinct p.id, coalesce(green_with_license, 0) as green_with_license
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from ${stats_db_name}.publication p
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left outer join (
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select distinct p.id, 1 as green_with_license from ${stats_db_name}.publication p
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join ${stats_db_name}.result_instance ri on ri.id = p.id
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join ${stats_db_name}.datasource on datasource.id = ri.hostedby
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where ri.license is not null and datasource.type like '%Repository%' and datasource.name!='Other') tmp
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on p.id= tmp.id; /*EOS*/
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select distinct p.id, 1 as green_with_license from ${stats_db_name}.publication p
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join ${stats_db_name}.result_instance ri on ri.id = p.id
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join ${stats_db_name}.datasource on datasource.id = ri.hostedby
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where ri.license is not null and datasource.type like '%Repository%' and datasource.name!='Other') tmp on p.id= tmp.id; /*EOS*/
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drop table if exists ${stats_db_name}.result_country purge; /*EOS*/
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