- Change the parquet compression from "Snappy" to "Gzip", as there is an unhandleable exception when the app is running inside a Docker Container and uses the "Snappy" compression.

- Code polishing.
This commit is contained in:
Lampros Smyrnaios 2022-12-08 16:28:41 +02:00
parent c8baf5a5fc
commit 0209d24068
4 changed files with 7 additions and 13 deletions

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@ -48,7 +48,7 @@ if [[ justInstall -eq 0 ]]; then
gradle clean build gradle clean build
if [[ shouldRunInDocker -eq 1 ]]; then if [[ shouldRunInDocker -eq 1 ]]; then
echo "Give the username for the Docker Hub:" echo -e "\nGive the username for the Docker Hub:"
read -r username read -r username
echo -e "\nBuilding docker image..\n" echo -e "\nBuilding docker image..\n"
sudo docker --version || handle_error "Docker was not found!" 3 sudo docker --version || handle_error "Docker was not found!" 3

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@ -8,7 +8,6 @@ import eu.openaire.urls_controller.payloads.requests.WorkerReport;
import eu.openaire.urls_controller.payloads.responces.AssignmentsResponse; import eu.openaire.urls_controller.payloads.responces.AssignmentsResponse;
import eu.openaire.urls_controller.util.FileUtils; import eu.openaire.urls_controller.util.FileUtils;
import eu.openaire.urls_controller.util.ParquetFileUtils; import eu.openaire.urls_controller.util.ParquetFileUtils;
import org.apache.commons.io.FileDeleteStrategy;
import org.slf4j.Logger; import org.slf4j.Logger;
import org.slf4j.LoggerFactory; import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired; import org.springframework.beans.factory.annotation.Autowired;
@ -20,7 +19,6 @@ import org.springframework.web.bind.annotation.*;
import javax.servlet.http.HttpServletRequest; import javax.servlet.http.HttpServletRequest;
import java.io.File; import java.io.File;
import java.io.IOException;
import java.nio.file.Files; import java.nio.file.Files;
import java.nio.file.Paths; import java.nio.file.Paths;
import java.sql.Connection; import java.sql.Connection;
@ -299,16 +297,12 @@ public class UrlController {
logger.error(errorMsg, e); logger.error(errorMsg, e);
return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body(errorMsg); return ResponseEntity.status(HttpStatus.INTERNAL_SERVER_ERROR).body(errorMsg);
} finally { } finally {
try { logger.debug("Deleting directory: " + currentParquetPath);
logger.debug("Deleting directory: " + currentParquetPath); fileUtils.deleteDirectory(new File(currentParquetPath));
FileDeleteStrategy.FORCE.delete(new File(currentParquetPath));
} catch (IOException e) {
logger.error("", e);
}
} }
logger.debug("Going to merge the parquet files for the tables which were altered."); logger.debug("Going to merge the parquet files for the tables which were altered.");
// When the uploaded parquet files are "loaded" into the tables, ther are actually moved into the directory which contains the data of the table. // When the uploaded parquet files are "loaded" into the tables, they are actually moved into the directory which contains the data of the table.
String mergeErrorMsg; String mergeErrorMsg;

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@ -314,7 +314,7 @@ public class ParquetFileUtils {
} }
try (ParquetWriter<GenericRecord> writer = AvroParquetWriter.<GenericRecord>builder(outputFile).withSchema(schema) try (ParquetWriter<GenericRecord> writer = AvroParquetWriter.<GenericRecord>builder(outputFile).withSchema(schema)
.withCompressionCodec(CompressionCodecName.SNAPPY).build()) .withCompressionCodec(CompressionCodecName.GZIP).build())
{ {
//logger.debug("Going to write to \"" + fullFilePath + "\" the record list: " + recordList); // DEBUG! //logger.debug("Going to write to \"" + fullFilePath + "\" the record list: " + recordList); // DEBUG!
for ( GenericRecord record : recordList ) { for ( GenericRecord record : recordList ) {
@ -322,7 +322,7 @@ public class ParquetFileUtils {
writer.write(record); writer.write(record);
} }
} catch (Throwable e) { // The simple "Exception" may not be thrown here, but an "Error" may be thrown. "Throwable" catches EVERYTHING! } catch (Throwable e) { // The simple "Exception" may not be thrown here, but an "Error" may be thrown. "Throwable" catches EVERYTHING!
logger.error("Problem when creating the \"ParquetWriter\" object or when writing a record with it!", e); logger.error("Problem when creating the \"ParquetWriter\" object or when writing the records with it!", e);
// At some point, I got an "NoSuchMethodError", because of a problem in the AvroSchema file: (java.lang.NoSuchMethodError: org.apache.avro.Schema.getLogicalType()Lorg/apache/avro/LogicalType;). // At some point, I got an "NoSuchMethodError", because of a problem in the AvroSchema file: (java.lang.NoSuchMethodError: org.apache.avro.Schema.getLogicalType()Lorg/apache/avro/LogicalType;).
// The error was with the schema: {"name": "date", "type" : ["null", {"type" : "long", "logicalType" : "timestamp-millis"}]}, // The error was with the schema: {"name": "date", "type" : ["null", {"type" : "long", "logicalType" : "timestamp-millis"}]},
return false; return false;

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@ -18,7 +18,7 @@ public class S3ObjectStore {
private static final Logger logger = LoggerFactory.getLogger(S3ObjectStore.class); private static final Logger logger = LoggerFactory.getLogger(S3ObjectStore.class);
private String s3Protocol = "s3://"; private final String s3Protocol = "s3://";
@Value("${services.pdfaggregation.controller.s3.endpoint}") @Value("${services.pdfaggregation.controller.s3.endpoint}")
private String endpoint = null; // This is useful to be "public", to test file-locations. private String endpoint = null; // This is useful to be "public", to test file-locations.
@Value("${services.pdfaggregation.controller.s3.accessKey}") @Value("${services.pdfaggregation.controller.s3.accessKey}")