2017-06-16 11:12:58 +02:00
|
|
|
package org.gcube.data.analysis.wps;
|
|
|
|
|
|
|
|
import java.io.InputStream;
|
2018-01-08 12:52:10 +01:00
|
|
|
import java.util.HashMap;
|
2017-09-19 17:19:03 +02:00
|
|
|
import java.util.HashSet;
|
2017-06-16 11:12:58 +02:00
|
|
|
import java.util.LinkedHashMap;
|
|
|
|
import java.util.List;
|
|
|
|
import java.util.Map;
|
|
|
|
import java.util.Set;
|
|
|
|
|
|
|
|
import org.apache.commons.io.IOUtils;
|
2018-01-08 12:52:10 +01:00
|
|
|
import org.gcube.common.authorization.library.provider.AuthorizationProvider;
|
2017-06-16 11:12:58 +02:00
|
|
|
import org.gcube.common.scope.api.ScopeProvider;
|
|
|
|
import org.gcube.data.analysis.wps.repository.GcubeAlgorithmRepository;
|
2018-01-08 12:52:10 +01:00
|
|
|
import org.gcube.dataanalysis.ecoengine.processing.factories.ProcessorsFactory;
|
2017-06-16 11:12:58 +02:00
|
|
|
import org.gcube.dataanalysis.wps.statisticalmanager.synchserver.infrastructure.InfrastructureDialoguer;
|
|
|
|
import org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mapping.ConfigurationManager;
|
|
|
|
import org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mapping.TokenManager;
|
|
|
|
import org.n52.wps.commons.WPSConfig;
|
|
|
|
import org.slf4j.Logger;
|
|
|
|
import org.slf4j.LoggerFactory;
|
|
|
|
|
|
|
|
public class GetCapabilitiesBuilder {
|
|
|
|
|
2018-01-08 12:52:10 +01:00
|
|
|
public static String processString = "<wps:Process wps:processVersion=\"1.1.0\">\n\t<ows:Identifier>#CLASS#</ows:Identifier>\n\t<ows:Title>#TITLE#</ows:Title>\n</wps:Process>";
|
|
|
|
|
2017-06-16 11:12:58 +02:00
|
|
|
private static final Logger LOGGER= LoggerFactory.getLogger(GetCapabilitiesBuilder.class);
|
2018-01-08 12:52:10 +01:00
|
|
|
|
|
|
|
public String getClassification(String algorithmName, ConfigurationManager configManager) throws Exception{
|
|
|
|
//get algorithms classification:
|
|
|
|
LOGGER.debug("Searching for a classification of "+algorithmName);
|
|
|
|
HashMap<String, List<String>> algorithmsClassification = ProcessorsFactory.getAllFeaturesUser(configManager.getConfig());
|
|
|
|
String rightClassification = "Others";
|
|
|
|
for (String classification:algorithmsClassification.keySet()){
|
|
|
|
List<String> algorithms = algorithmsClassification.get(classification);
|
|
|
|
if (algorithms.contains(algorithmName)){
|
|
|
|
LOGGER.debug("Found classification"+classification);
|
|
|
|
return classification;
|
|
|
|
}
|
|
|
|
}
|
|
|
|
LOGGER.debug("No classification found for "+algorithmName);
|
|
|
|
return rightClassification;
|
|
|
|
}
|
|
|
|
|
2017-06-16 11:12:58 +02:00
|
|
|
public String buildGetCapabilities(Map<String, String[]> parameters) throws Exception {
|
|
|
|
|
|
|
|
LinkedHashMap<String, Object> basicInputs = new LinkedHashMap<String, Object>();
|
2018-01-08 12:52:10 +01:00
|
|
|
//DONE get scope and username from SmartGears to build the get capabilities
|
|
|
|
/* OLD CODE
|
|
|
|
if (parameters != null) {
|
|
|
|
if (parameters.get(ConfigurationManager.scopeParameter) != null)
|
|
|
|
basicInputs.put(ConfigurationManager.scopeParameter, parameters.get(ConfigurationManager.scopeParameter)[0]);
|
|
|
|
if (parameters.get(ConfigurationManager.usernameParameter) != null)
|
|
|
|
basicInputs.put(ConfigurationManager.usernameParameter, parameters.get(ConfigurationManager.usernameParameter)[0]);
|
|
|
|
} else {// case for testing purposes only
|
|
|
|
if (AbstractEcologicalEngineMapper.simulationMode){
|
|
|
|
basicInputs.put(ConfigurationManager.scopeParameter, ConfigurationManager.defaultScope);
|
|
|
|
basicInputs.put(ConfigurationManager.usernameParameter, ConfigurationManager.defaultUsername);
|
|
|
|
}
|
|
|
|
}
|
|
|
|
*/
|
2017-06-16 11:12:58 +02:00
|
|
|
ConfigurationManager configManager = new ConfigurationManager();
|
|
|
|
TokenManager tokenm = new TokenManager();
|
|
|
|
tokenm.getCredentials();
|
|
|
|
String scope = tokenm.getScope();
|
|
|
|
String username = tokenm.getUserName();
|
|
|
|
String token = tokenm.getToken();
|
|
|
|
basicInputs.put(ConfigurationManager.scopeParameter, scope);
|
|
|
|
basicInputs.put(ConfigurationManager.usernameParameter, username);
|
|
|
|
basicInputs.put(ConfigurationManager.tokenParameter, token);
|
2018-01-08 12:52:10 +01:00
|
|
|
|
2017-06-16 11:12:58 +02:00
|
|
|
configManager.configAlgorithmEnvironment(basicInputs);
|
|
|
|
LOGGER.debug("Initializing Capabilities Skeleton in scope " + configManager.getScope() + " with user " + configManager.getUsername());
|
|
|
|
InputStream is = this.getClass().getClassLoader().getResourceAsStream("templates/wpsCapabilitiesSkeleton.xml");
|
|
|
|
String stringTemplate = IOUtils.toString(is, "UTF-8");
|
2018-01-08 12:52:10 +01:00
|
|
|
|
2017-06-16 11:12:58 +02:00
|
|
|
//TODO: GET HOSTNAME AND PORT from container
|
|
|
|
String host = WPSConfig.getInstance().getWPSConfig().getServer().getHostname();
|
|
|
|
String port = WPSConfig.getInstance().getWPSConfig().getServer().getHostport();
|
|
|
|
stringTemplate = stringTemplate.replace("#HOST#", host).replace("#PORT#", port);
|
|
|
|
|
|
|
|
LOGGER.debug("Host: " + host + " Port: " + port);
|
2018-01-08 12:52:10 +01:00
|
|
|
|
|
|
|
LinkedHashMap<String, String> allalgorithms = new LinkedHashMap<String, String>();
|
|
|
|
/*
|
|
|
|
String packageS = "org.gcube.dataanalysis.wps.statisticalmanager.synchserver.mappedclasses";
|
|
|
|
List<Class<?>> classes = null;
|
|
|
|
try{
|
|
|
|
LOGGER.debug("Taking classes from /classes");
|
|
|
|
classes = GetCapabilitiesChecker.find(packageS);
|
|
|
|
}catch(Exception e){
|
|
|
|
LOGGER.debug("Taking classes from the Jar");
|
|
|
|
classes=GetCapabilitiesChecker.getClassesInSamePackageFromJar(packageS);
|
|
|
|
}*/
|
|
|
|
|
|
|
|
LOGGER.info("using classloader class {} ",Thread.currentThread().getContextClassLoader().getClass().getSimpleName());
|
|
|
|
|
|
|
|
|
|
|
|
Set<Class<?>> algorithmsClass = GcubeAlgorithmRepository.getAllAlgorithms();
|
|
|
|
|
|
|
|
LOGGER.info("class found with annotation Algorithm are {}",algorithmsClass.size());
|
|
|
|
|
|
|
|
for (Class<?> classfind : algorithmsClass) {
|
|
|
|
org.n52.wps.algorithm.annotation.Algorithm algorithmInfo = classfind.getAnnotation(org.n52.wps.algorithm.annotation.Algorithm.class);
|
|
|
|
if (algorithmInfo != null) {
|
|
|
|
LOGGER.debug("Retrieving local declared Algorithm: " + algorithmInfo.title());
|
|
|
|
allalgorithms.put(algorithmInfo.title(), classfind.getName());
|
|
|
|
}
|
|
|
|
}
|
2017-06-16 11:12:58 +02:00
|
|
|
|
|
|
|
LOGGER.debug("Getting algorithms from the infrastructure");
|
|
|
|
InfrastructureDialoguer dialoguer = new InfrastructureDialoguer(configManager.getScope());
|
|
|
|
List<String> algorithmsInScope = dialoguer.getAlgorithmsInScope();
|
|
|
|
LOGGER.debug("Found {} algorithms in scope {} ",algorithmsInScope.size() ,ScopeProvider.instance.get());
|
|
|
|
StringBuffer capabilities = new StringBuffer();
|
2018-01-08 12:52:10 +01:00
|
|
|
|
2017-09-19 17:19:03 +02:00
|
|
|
//TO eliminate duplicate coming from IS
|
|
|
|
Set<String> algorithmsSet = new HashSet<String>(algorithmsInScope);
|
2018-01-08 12:52:10 +01:00
|
|
|
algorithmsSet.addAll(dialoguer.getPrivateAlgorithmsInScope(AuthorizationProvider.instance.get().getClient().getId()));
|
|
|
|
|
|
|
|
for (String algorithmInScope : algorithmsSet ) {
|
|
|
|
String classAlgorithm = allalgorithms.get(algorithmInScope);
|
|
|
|
if (classAlgorithm != null) {
|
|
|
|
LOGGER.debug("Approving " + classAlgorithm + " to capabilities ");
|
|
|
|
String algorithmTitle = getClassification(algorithmInScope, configManager)+":"+algorithmInScope;
|
|
|
|
// String algorithmTitle = algorithmInScope;
|
|
|
|
capabilities.append(processString.replace("#TITLE#", algorithmTitle).replace("#CLASS#", classAlgorithm));
|
2017-06-16 11:12:58 +02:00
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
stringTemplate = stringTemplate.replace("#PROCESSES#", capabilities.toString());
|
|
|
|
LOGGER.debug("Get capabilities built");
|
|
|
|
return stringTemplate;
|
|
|
|
}
|
|
|
|
|
2018-01-08 12:52:10 +01:00
|
|
|
|
|
|
|
|
2017-06-16 11:12:58 +02:00
|
|
|
}
|