Updated Resource
git-svn-id: https://svn.d4science.research-infrastructures.eu/gcube/trunk/portlets/user/tabular-data-gwt-service@113635 82a268e6-3cf1-43bd-a215-b396298e98cf
This commit is contained in:
parent
40aff27b87
commit
7bd02e8ba1
7
pom.xml
7
pom.xml
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@ -203,6 +203,13 @@
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<scope>provided</scope>
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</dependency>
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<!-- Tika -->
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<dependency>
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<groupId>org.apache.tika</groupId>
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<artifactId>tika-core</artifactId>
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<version>1.7</version>
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</dependency>
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<!-- LOGGING -->
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@ -0,0 +1,137 @@
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/**
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*
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*/
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package org.gcube.portlets.user.td.gwtservice.server;
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import java.io.IOException;
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import java.io.InputStream;
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import java.io.OutputStream;
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import javax.servlet.ServletException;
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import javax.servlet.http.HttpServlet;
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import javax.servlet.http.HttpServletRequest;
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import javax.servlet.http.HttpServletResponse;
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import javax.servlet.http.HttpSession;
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import org.apache.tika.config.TikaConfig;
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import org.apache.tika.metadata.Metadata;
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import org.apache.tika.mime.MediaType;
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import org.gcube.portlets.user.td.gwtservice.server.storage.FilesStorage;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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/**
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* Returns a file from storage and discover mime type
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*
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* @author "Giancarlo Panichi" <a
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* href="mailto:g.panichi@isti.cnr.it">g.panichi@isti.cnr.it</a>
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*
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*/
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public class RetrieveFileAndDiscoverMimeTypeServlet extends HttpServlet {
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private static final long serialVersionUID = -1649268678733476057L;
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private static Logger logger = LoggerFactory
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.getLogger(RetrieveFileAndDiscoverMimeTypeServlet.class);
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private static final String ATTRIBUTE_STORAGE_URI = "storageURI";
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private static final int BUFSIZE = 4096;
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protected void doPost(HttpServletRequest req, HttpServletResponse resp)
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throws ServletException, IOException {
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handleRequest(req, resp);
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}
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protected void doGet(HttpServletRequest req, HttpServletResponse resp)
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throws ServletException, IOException {
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handleRequest(req, resp);
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}
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protected void handleRequest(HttpServletRequest request,
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HttpServletResponse response) throws ServletException, IOException {
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try {
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logger.info("RetrieveFileAndDiscoverMimeTypeServlet");
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long startTime = System.currentTimeMillis();
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HttpSession session = request.getSession();
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if (session == null) {
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logger.error("Error getting the session, no session valid found: "
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+ session);
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response.sendError(
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HttpServletResponse.SC_INTERNAL_SERVER_ERROR,
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"ERROR-Error getting the user session, no session found "
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+ session);
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return;
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}
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logger.debug("RetrieveFileAndDiscoverMimeTypeServlet session id: "
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+ session.getId());
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SessionUtil.getAslSession(session);
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String uri = (String) request.getParameter(ATTRIBUTE_STORAGE_URI);
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logger.debug("Request storage uri: " + uri);
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if (uri == null || uri.isEmpty()) {
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logger.error("Error getting request uri: " + uri);
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response.sendError(
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HttpServletResponse.SC_INTERNAL_SERVER_ERROR,
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"ERROR-Error getting request uri: " + session);
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return;
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}
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FilesStorage storage = new FilesStorage();
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InputStream inMime = storage.retrieveImputStream(uri);
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TikaConfig tika = new TikaConfig();
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MediaType mimeType=null;
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try {
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mimeType = tika.getDetector().detect(
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inMime, new Metadata());
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} catch(Throwable e){
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logger.error("RetrieveFileAndDiscoverMimeTypeServlet parse: "+e.getLocalizedMessage());
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} finally {
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inMime.close();
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}
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if (mimeType == null) {
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response.setContentType("unknown");
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logger.debug("Discover Mime Type: unknown");
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} else {
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response.setContentType(mimeType.toString());
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logger.debug("Discover Mime Type: "+mimeType.toString());
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}
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InputStream in = storage.retrieveImputStream(uri);
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OutputStream out = response.getOutputStream();
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byte[] byteBuffer = new byte[BUFSIZE];
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int length = 0;
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while ((in != null) && ((length = in.read(byteBuffer)) != -1)) {
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out.write(byteBuffer, 0, length);
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}
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response.setStatus(HttpServletResponse.SC_OK);
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in.close();
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out.close();
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logger.trace("Response in "
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+ (System.currentTimeMillis() - startTime));
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} catch (Throwable e) {
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logger.error("Error retrieving file from storage: "
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+ e.getLocalizedMessage());
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e.printStackTrace();
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response.sendError(
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HttpServletResponse.SC_INTERNAL_SERVER_ERROR,
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"Error retrieving file from storage: "
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+ e.getLocalizedMessage());
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return;
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}
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}
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}
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@ -22,8 +22,10 @@ import java.util.HashMap;
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import java.util.Iterator;
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import java.util.List;
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import java.util.Map;
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import java.util.Properties;
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import java.util.Set;
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import javax.servlet.ServletException;
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import javax.servlet.http.HttpSession;
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import org.gcube.application.framework.core.session.ASLSession;
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@ -321,6 +323,24 @@ public class TDGWTServiceImpl extends RemoteServiceServlet implements
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private static SimpleDateFormat sdfPerformance = new SimpleDateFormat(
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"yyyy-MM-dd HH:mm:ss.SSS");
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@Override
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public void init() throws ServletException {
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super.init();
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//Handler.activateProtocol();
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//logger.debug("Activated SMP Handler");
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/*
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ConfigurableStreamHandlerFactory confStreamHandlerFactory = new ConfigurableStreamHandlerFactory(
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"smp", new Handler());
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URL.setURLStreamHandlerFactory(confStreamHandlerFactory);
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logger.debug("Activated SMP Handler");
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*/
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Properties props=System.getProperties();
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logger.debug("System Properties: "+props);
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}
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/**
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*
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* {@inheritDoc}
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@ -600,7 +620,7 @@ public class TDGWTServiceImpl extends RemoteServiceServlet implements
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public TRId restoreUISession(TRId startTRId) throws TDGWTServiceException {
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try {
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HttpSession session = this.getThreadLocalRequest().getSession();
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ASLSession aslSession=SessionUtil.getAslSession(session);
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ASLSession aslSession = SessionUtil.getAslSession(session);
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if (startTRId == null || startTRId.getId() == null
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|| startTRId.getId().isEmpty()) {
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@ -620,14 +640,14 @@ public class TDGWTServiceImpl extends RemoteServiceServlet implements
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}
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return trId;
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} else {
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logger.debug("Restore UI Session() request TabularResource:" + startTRId);
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SessionUtil
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.removeAllFromCurrentTabularResourcesOpen(session);
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logger.debug("Restore UI Session() request TabularResource:"
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+ startTRId);
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SessionUtil.removeAllFromCurrentTabularResourcesOpen(session);
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AuthorizationProvider.instance.set(new AuthorizationToken(
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aslSession.getUsername(), aslSession.getScope()));
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TabularDataService service = TabularDataServiceFactory.getService();
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TabularDataService service = TabularDataServiceFactory
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.getService();
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TabularResourceId tabularResourceId = new TabularResourceId(
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Long.valueOf(startTRId.getId()));
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@ -636,10 +656,12 @@ public class TDGWTServiceImpl extends RemoteServiceServlet implements
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checkTabularResourceLocked(tabularResource);
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TabResource tabResource=retrieveTRMetadataFromServiceAndLastTable(service, tabularResource, 1);
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TabResource tabResource = retrieveTRMetadataFromServiceAndLastTable(
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service, tabularResource, 1);
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if(tabResource.getTrId()==null|| tabResource.getTrId().getId()==null||
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tabResource.getTrId().getId().isEmpty()){
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if (tabResource.getTrId() == null
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|| tabResource.getTrId().getId() == null
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|| tabResource.getTrId().getId().isEmpty()) {
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return null;
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} else {
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setCurrentTabResource(tabResource, session);
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@ -693,8 +715,7 @@ public class TDGWTServiceImpl extends RemoteServiceServlet implements
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TDGWTSessionExpiredException {
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if (tabResource == null) {
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logger.error("Error setting TabResource: null");
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throw new TDGWTServiceException(
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"Error setting TabResource: null");
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throw new TDGWTServiceException("Error setting TabResource: null");
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}
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SessionUtil.setTabResource(session, tabResource);
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@ -4335,7 +4356,7 @@ public class TDGWTServiceImpl extends RemoteServiceServlet implements
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ArrayList<Validations> vList = new ArrayList<Validations>();
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int i = 0;
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for (Validation v : vals) {
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valid = new Validations(String.valueOf(i),"",
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valid = new Validations(String.valueOf(i), "",
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v.getDescription(), v.isValid(), null, null);
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vList.add(valid);
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i++;
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ArrayList<Validations> validations = new ArrayList<Validations>();
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for (ValidationDescriptor val : job.getValidations()) {
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Validations validation = new Validations(
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String.valueOf(i),val.getTitle(), val.getDescription(),
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val.isValid(),
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String.valueOf(i), val.getTitle(),
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val.getDescription(), val.isValid(),
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ConditionCodeMap.mapConditionCode(val
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.getConditionCode()),
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val.getValidationColumn());
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task.getId().getValue(), refColumn);
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}
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JobSClassifier jobClassifier=JobClassifierMap.map(job.getJobClassifier());
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JobSClassifier jobClassifier = JobClassifierMap.map(job
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.getJobClassifier());
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JobS jobS = new JobS(String.valueOf(j), job.getProgress(),
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job.getHumaReadableStatus(), jobClassifier, job.getDescription(),
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validations, invocationS);
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job.getHumaReadableStatus(), jobClassifier,
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job.getDescription(), validations, invocationS);
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jobSList.add(jobS);
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j++;
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} else {
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if (resource instanceof InternalURITD) {
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InternalURITD internalURITD = (InternalURITD) resource;
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uri = internalURITD.getUri();
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uri = internalURITD.getUrl();
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} else {
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if (resource instanceof TableResourceTD) {
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throw new TDGWTServiceException(
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@ -10,6 +10,7 @@ import org.gcube.data.analysis.tabulardata.model.resources.Resource;
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import org.gcube.data.analysis.tabulardata.model.resources.ResourceType;
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import org.gcube.data.analysis.tabulardata.model.resources.StringResource;
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import org.gcube.data.analysis.tabulardata.model.resources.TableResource;
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import org.gcube.data.analysis.tabulardata.model.resources.Thumbnail;
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import org.gcube.portlets.user.td.gwtservice.shared.exception.TDGWTServiceException;
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import org.gcube.portlets.user.td.gwtservice.shared.tr.resources.InternalURITD;
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import org.gcube.portlets.user.td.gwtservice.shared.tr.resources.ResourceTD;
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@ -17,6 +18,8 @@ import org.gcube.portlets.user.td.gwtservice.shared.tr.resources.ResourceTDDescr
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import org.gcube.portlets.user.td.gwtservice.shared.tr.resources.ResourceTDType;
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import org.gcube.portlets.user.td.gwtservice.shared.tr.resources.StringResourceTD;
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import org.gcube.portlets.user.td.gwtservice.shared.tr.resources.TableResourceTD;
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import org.gcube.portlets.user.td.widgetcommonevent.shared.mime.MimeTypeSupport;
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import org.gcube.portlets.user.td.widgetcommonevent.shared.thumbnail.ThumbnailTD;
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import org.slf4j.Logger;
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import org.slf4j.LoggerFactory;
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@ -96,9 +99,20 @@ public class ResourceTDCreator {
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Class<? extends Resource> resourceClass = resource.getResourceType();
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if (resourceClass == InternalURI.class) {
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InternalURI internalURI = (InternalURI) resource;
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String uri = internalURI.getUri().toString();
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return new InternalURITD(internalURI.getFileId(), uri);
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String url = internalURI.getUrl().toString();
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MimeTypeSupport mimeTypeSupport = MimeTypeSupport
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.getMimeTypeSupportFromMimeName(internalURI.getMimeType()
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.getValue());
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Thumbnail thumbnail = internalURI.getThumbnail();
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MimeTypeSupport mimeTypeThumbnail = MimeTypeSupport
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.getMimeTypeSupportFromMimeName(thumbnail.getMimeType()
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.getValue());
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ThumbnailTD thumbnailTD = new ThumbnailTD(thumbnail.getUrl()
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.toString(), mimeTypeThumbnail);
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return new InternalURITD(internalURI.getFileId(), url,
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mimeTypeSupport, thumbnailTD);
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} else {
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if (resourceClass == StringResource.class) {
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StringResource stringResource = (StringResource) resource;
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@ -1,10 +1,12 @@
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package org.gcube.portlets.user.td.gwtservice.shared.tr.resources;
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import org.gcube.portlets.user.td.widgetcommonevent.shared.mime.MimeTypeSupport;
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import org.gcube.portlets.user.td.widgetcommonevent.shared.thumbnail.ThumbnailTD;
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/**
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*
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* @author giancarlo
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* email: <a href="mailto:g.panichi@isti.cnr.it">g.panichi@isti.cnr.it</a>
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* @author giancarlo email: <a
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* href="mailto:g.panichi@isti.cnr.it">g.panichi@isti.cnr.it</a>
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*
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*/
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public class InternalURITD extends ResourceTD {
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private String fileId;
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private String uri;
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private String url;
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private MimeTypeSupport mimeTypeSupport;
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private ThumbnailTD thumbnailTD;
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public InternalURITD() {
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super();
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/**
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*
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* @param fileId
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* @param uri
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* @param url
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*/
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public InternalURITD(String fileId, String uri) {
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super(uri);
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public InternalURITD(String fileId, String url,
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MimeTypeSupport mimeTypeSupport, ThumbnailTD thumbnailTD) {
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super(url);
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this.fileId = fileId;
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this.uri = uri;
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this.url = url;
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this.mimeTypeSupport=mimeTypeSupport;
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this.thumbnailTD=thumbnailTD;
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}
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@Override
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public String getStringValue() {
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return uri;
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return url;
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}
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public String getFileId() {
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@ -42,21 +51,38 @@ public class InternalURITD extends ResourceTD {
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this.fileId = fileId;
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}
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public String getUri() {
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return uri;
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public String getUrl() {
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return url;
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}
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public void setUrl(String url) {
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this.url = url;
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}
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public MimeTypeSupport getMimeTypeSupport() {
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return mimeTypeSupport;
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}
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public void setUri(String uri) {
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this.uri = uri;
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public void setMimeTypeSupport(MimeTypeSupport mimeTypeSupport) {
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this.mimeTypeSupport = mimeTypeSupport;
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}
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public ThumbnailTD getThumbnailTD() {
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return thumbnailTD;
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}
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public void setThumbnailTD(ThumbnailTD thumbnailTD) {
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this.thumbnailTD = thumbnailTD;
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}
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@Override
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public String toString() {
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return "InternalURITD [fileId=" + fileId + ", uri=" + uri + "]";
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return "InternalURITD [fileId=" + fileId + ", url=" + url
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+ ", mimeTypeSupport=" + mimeTypeSupport + ", thumbnailTD="
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+ thumbnailTD + "]";
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}
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}
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@ -31,6 +31,10 @@
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<servlet-class>org.gcube.portlets.user.td.gwtservice.server.RetrieveChartFileServlet</servlet-class>
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</servlet>
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<servlet>
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<servlet-name>RetrieveFileAndDiscoverMimeTypeServlet</servlet-name>
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<servlet-class>org.gcube.portlets.user.td.gwtservice.server.RetrieveFileAndDiscoverMimeTypeServlet</servlet-class>
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</servlet>
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<servlet>
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<servlet-name>TDRStudioServlet</servlet-name>
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@ -76,6 +80,11 @@
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<url-pattern>/tdgwtservice/RetrieveChartFileServlet</url-pattern>
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</servlet-mapping>
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<servlet-mapping>
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<servlet-name>RetrieveFileAndDiscoverMimeTypeServlet</servlet-name>
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<url-pattern>/tdgwtservice/RetrieveFileAndDiscoverMimeTypeServlet</url-pattern>
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</servlet-mapping>
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<servlet-mapping>
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<servlet-name>TDRStudioServlet</servlet-name>
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<url-pattern>/tdgwtservice/TDRStudioServlet</url-pattern>
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