ref 8819: Extend The Algorithms Importer to Manage Many Processes as Black Boxes

https://support.d4science.org/issues/8819

Updated the support for Processes as Black Boxes

git-svn-id: https://svn.d4science.research-infrastructures.eu/gcube/trunk/portlets/user/statistical-algorithms-importer@149379 82a268e6-3cf1-43bd-a215-b396298e98cf

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/StatAlgoImporterController.java

@@ -2,6 +2,7 @@ package org.gcube.portlets.user.statisticalalgorithmsimporter.client;
 
 import java.util.Date;
 
+import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.BinaryCodeSetEvent;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.DeleteItemEvent;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.InputReadyEvent;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.InputRequestEvent;
@@ -218,6 +219,20 @@ public class StatAlgoImporterController {
 
 				});
 		
+
+		eventBus.addHandler(BinaryCodeSetEvent.TYPE,
+				new BinaryCodeSetEvent.BinaryCodeSetEventHandler() {
+
+					@Override
+					public void onBinaryCodeSet(BinaryCodeSetEvent event) {
+						Log.debug("Catch BinaryCodeSetEvent");
+						doBinaryCodeSetCommand(event);
+
+					}
+
+				});
+
+		
 		eventBus.addHandler(DeleteItemEvent.TYPE,
 				new DeleteItemEvent.DeleteItemEventHandler() {
 
@@ -419,6 +434,15 @@ public class StatAlgoImporterController {
 
 	}
 	
+	private void doBinaryCodeSetCommand(BinaryCodeSetEvent event) {
+		ItemDescription itemDescription = event.getItemDescription();
+		if (itemDescription != null && itemDescription.getId() != null) {
+			pm.setBinaryCode(itemDescription);
+		}
+
+	}
+	
+
 	private void doSetNewMainCodeEvent(NewMainCodeEvent event) {
 		monitor = new StatAlgoImporterMonitor();
 		pm.setNewMainCode(event, monitor);

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/event/BinaryCodeSetEvent.java

@@ -0,0 +1,62 @@
+package org.gcube.portlets.user.statisticalalgorithmsimporter.client.event;
+
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.workspace.ItemDescription;
+
+import com.google.gwt.event.shared.EventHandler;
+import com.google.gwt.event.shared.GwtEvent;
+import com.google.gwt.event.shared.HandlerRegistration;
+import com.google.gwt.event.shared.HasHandlers;
+
+/**
+ * Binary Code Set Event
+ * 
+ * 
+ * @author Giancarlo Panichi
+ *
+ *
+ */
+public class BinaryCodeSetEvent extends GwtEvent<BinaryCodeSetEvent.BinaryCodeSetEventHandler> {
+
+	public static Type<BinaryCodeSetEventHandler> TYPE = new Type<BinaryCodeSetEventHandler>();
+	private ItemDescription itemDescription;
+
+	public interface BinaryCodeSetEventHandler extends EventHandler {
+		void onBinaryCodeSet(BinaryCodeSetEvent event);
+	}
+
+	public interface HasBinaryCodeSetEventHandler extends HasHandlers {
+		public HandlerRegistration addBinaryCodeSetEventHandler(BinaryCodeSetEventHandler handler);
+	}
+
+	public BinaryCodeSetEvent(ItemDescription itemDescription) {
+		this.itemDescription = itemDescription;
+	}
+
+	@Override
+	protected void dispatch(BinaryCodeSetEventHandler handler) {
+		handler.onBinaryCodeSet(this);
+	}
+
+	@Override
+	public Type<BinaryCodeSetEventHandler> getAssociatedType() {
+		return TYPE;
+	}
+
+	public static Type<BinaryCodeSetEventHandler> getType() {
+		return TYPE;
+	}
+
+	public static void fire(HasHandlers source, BinaryCodeSetEvent binaryCodeSetEvent) {
+		source.fireEvent(binaryCodeSetEvent);
+	}
+
+	public ItemDescription getItemDescription() {
+		return itemDescription;
+	}
+
+	@Override
+	public String toString() {
+		return "BinaryCodeSetEvent [itemDescription=" + itemDescription + "]";
+	}
+
+}

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/maindata/MainDataPanel.java

@@ -68,6 +68,7 @@ public class MainDataPanel extends SimpleContainer {
 		case OPEN:
 			addCodeEditPanel(event.getProject());
 			break;
+		case BINARY_CODE_SET:	
 		case SAVE:
 		case START:
 		case UPDATE:

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/project/ProjectManager.java

@@ -20,6 +20,7 @@ import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.exception.St
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.InputData;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.Project;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.ProjectCreateSession;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.ProjectSupportBlackBox;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.workspace.ItemDescription;
 import org.gcube.portlets.widgets.githubconnector.client.GitHubConnectorWizard;
 import org.gcube.portlets.widgets.githubconnector.client.wizard.event.WizardEvent;
@@ -517,6 +518,45 @@ public class ProjectManager {
 				});
 	}
 
+	public void setBinaryCode(final ItemDescription itemDescription) {
+		if (project != null) {
+			if (project.getProjectConfig() != null && project.getProjectConfig().getProjectSupport() != null
+					&& project.getProjectConfig().getProjectSupport() instanceof ProjectSupportBlackBox) {
+				setBinaryCodeOnServer(itemDescription);
+			}
+
+		} else {
+
+		}
+
+	}
+
+	private void setBinaryCodeOnServer(final ItemDescription itemDescription) {
+
+		Log.debug("Set Binary Code: " + itemDescription);
+		StatAlgoImporterServiceAsync.INSTANCE.setBinaryCode(itemDescription, new AsyncCallback<Project>() {
+
+			@Override
+			public void onFailure(Throwable caught) {
+				if (caught instanceof StatAlgoImporterSessionExpiredException) {
+					eventBus.fireEvent(new SessionExpiredEvent(SessionExpiredType.EXPIREDONSERVER));
+				} else {
+					Log.error("Error setting code: " + caught.getLocalizedMessage());
+					UtilsGXT3.alert("Error", caught.getLocalizedMessage());
+				}
+				caught.printStackTrace();
+
+			}
+
+			@Override
+			public void onSuccess(Project result) {
+				project = result;
+				fireProjectStatusBinaryCodeSetEvent();
+			}
+		});
+
+	}
+
 	public void deleteItem(final ItemDescription itemDescription) {
 		if (project != null && project.getMainCode() != null && project.getMainCode().getItemDescription() != null
 				&& itemDescription.getId().compareTo(project.getMainCode().getItemDescription().getId()) == 0) {
@@ -821,6 +861,12 @@ public class ProjectManager {
 		eventBus.fireEvent(projectStatusEvent);
 	}
 	
+	private void fireProjectStatusBinaryCodeSetEvent() {
+		ProjectStatusEvent projectStatusEvent = new ProjectStatusEvent(ProjectStatusEventType.BINARY_CODE_SET, project);
+		Log.debug("Project Manager ProjectStatusEvent fire! " + projectStatusEvent);
+		eventBus.fireEvent(projectStatusEvent);
+	}
+
 	private void fireProjectStatusSoftwareCreatedEvent() {
 		ProjectStatusEvent projectStatusEvent = new ProjectStatusEvent(ProjectStatusEventType.SOFTWARE_CREATED,
 				project);
@@ -851,11 +897,12 @@ public class ProjectManager {
 
 	}
 
+	/*
 	private void fireProjectStatusOpenEvent() {
 		ProjectStatusEvent projectStatusEvent = new ProjectStatusEvent(ProjectStatusEventType.OPEN, project);
 		Log.debug("Project Manager ProjectStatusEvent fire! " + projectStatusEvent);
 		eventBus.fireEvent(projectStatusEvent);
 
-	}
+	}*/
 
 }

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/rpc/StatAlgoImporterService.java

@@ -58,6 +58,8 @@ public interface StatAlgoImporterService extends RemoteService {
 	//
 	public Project setMainCode(ItemDescription itemDescription) throws StatAlgoImporterServiceException;
 	
+	public Project setBinaryCode(ItemDescription itemDescription) throws StatAlgoImporterServiceException;
+	
 	public void addResourceToProject(ItemDescription itemDescription) throws StatAlgoImporterServiceException;
 
 	public Project deleteResourceOnProject(ItemDescription itemDescription) throws StatAlgoImporterServiceException;
@@ -80,4 +82,5 @@ public interface StatAlgoImporterService extends RemoteService {
 
 	public void repackageSoftware() throws StatAlgoImporterServiceException;
 
+	
 }

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/rpc/StatAlgoImporterServiceAsync.java

@@ -38,7 +38,9 @@ public interface StatAlgoImporterServiceAsync {
 
 	void createProjectOnWorkspace(ProjectCreateSession projectCreateSession, AsyncCallback<Project> callback);
 
-	void setMainCode(ItemDescription itemDescription, AsyncCallback<Project> callback);
+	void setMainCode(ItemDescription itemDescription, AsyncCallback<Project> asyncCallback);
+
+	void setBinaryCode(ItemDescription itemDescription, AsyncCallback<Project> asyncCallback);
 	
 	void addResourceToProject(ItemDescription itemDescription, AsyncCallback<Void> asyncCallback);
 
@@ -64,4 +66,5 @@ public interface StatAlgoImporterServiceAsync {
 
 	
 	
+
 }

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/tools/explorer/ExplorerProjectPanel.java

@@ -1,5 +1,6 @@
 package org.gcube.portlets.user.statisticalalgorithmsimporter.client.tools.explorer;
 
+import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.BinaryCodeSetEvent;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.DeleteItemEvent;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.MainCodeSetEvent;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.event.ProjectStatusEvent;
@@ -9,6 +10,7 @@ import org.gcube.portlets.user.statisticalalgorithmsimporter.client.rpc.StatAlgo
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.type.SessionExpiredType;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.client.utils.UtilsGXT3;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.exception.StatAlgoImporterSessionExpiredException;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.ProjectSupportBlackBox;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.workspace.ItemDescription;
 import org.gcube.portlets.widgets.workspaceuploader.client.WorkspaceUploadNotification.WorskpaceUploadNotificationListener;
 import org.gcube.portlets.widgets.workspaceuploader.client.uploader.DialogUpload.UPLOAD_TYPE;
@@ -103,6 +105,7 @@ public class ExplorerProjectPanel extends ContentPanel {
 	}
 
 	private void manageProjectStatusEvents(ProjectStatusEvent event) {
+
 		switch (event.getProjectStatusEventType()) {
 		case START:
 			break;
@@ -115,6 +118,7 @@ public class ExplorerProjectPanel extends ContentPanel {
 			break;
 		case SAVE:
 		case MAIN_CODE_SET:
+		case BINARY_CODE_SET:	
 		case SOFTWARE_CREATED:
 		case SOFTWARE_PUBLISH:
 		case SOFTWARE_REPACKAGE:
@@ -201,19 +205,36 @@ public class ExplorerProjectPanel extends ContentPanel {
 			dnd.addWorkspaceUploadNotificationListener(workspaceUploaderListener);
 
 			// ToolBar
-			btnSetMain = new TextButton("Set Main");
+			if (event.getProject().getProjectConfig().getProjectSupport() instanceof ProjectSupportBlackBox) {
-			btnSetMain.setIcon(StatAlgoImporterResources.INSTANCE.add16());
+				btnSetMain = new TextButton("Set Code");
-			btnSetMain.setScale(ButtonScale.SMALL);
+				btnSetMain.setIcon(StatAlgoImporterResources.INSTANCE.add16());
-			btnSetMain.setIconAlign(IconAlign.LEFT);
+				btnSetMain.setScale(ButtonScale.SMALL);
-			btnSetMain.setToolTip("Set main code");
+				btnSetMain.setIconAlign(IconAlign.LEFT);
-			btnSetMain.addSelectHandler(new SelectHandler() {
+				btnSetMain.setToolTip("Set code");
+				btnSetMain.addSelectHandler(new SelectHandler() {
 
-				@Override
+					@Override
-				public void onSelect(SelectEvent event) {
+					public void onSelect(SelectEvent event) {
-					setMainCode(event);
+						setBinaryCode(event);
-				}
+					}
 
-			});
+				});
+			} else {
+
+				btnSetMain = new TextButton("Set Main");
+				btnSetMain.setIcon(StatAlgoImporterResources.INSTANCE.add16());
+				btnSetMain.setScale(ButtonScale.SMALL);
+				btnSetMain.setIconAlign(IconAlign.LEFT);
+				btnSetMain.setToolTip("Set main code");
+				btnSetMain.addSelectHandler(new SelectHandler() {
+
+					@Override
+					public void onSelect(SelectEvent event) {
+						setMainCode(event);
+					}
+
+				});
+			}
 
 			btnOpen = new TextButton("Open");
 			btnOpen.setIcon(StatAlgoImporterResources.INSTANCE.download16());
@@ -283,14 +304,7 @@ public class ExplorerProjectPanel extends ContentPanel {
 
 	}
 
-	private void setMainCode(SelectEvent event) {
+	
-		Log.debug("Set Main Code");
-		if (selectedItem != null && selectedItem.getType().compareTo(ItemType.EXTERNAL_FILE) == 0) {
-			loadData();
-		} else {
-			UtilsGXT3.info("Attention", "Select a valid file to be used as main!");
-		}
-	}
 	
 	private void deleteItem(SelectEvent event) {
 		ItemDescription itemDescription = new ItemDescription(selectedItem.getId(), selectedItem.getName(),
@@ -300,7 +314,17 @@ public class ExplorerProjectPanel extends ContentPanel {
 		Log.debug("Fired: " + deleteItemEvent);
 	}
 
-	private void loadData() {
+	private void setMainCode(SelectEvent event) {
+		Log.debug("Set Code");
+		if (selectedItem != null && selectedItem.getType().compareTo(ItemType.EXTERNAL_FILE) == 0) {
+			setMainCodeData();
+		} else {
+			UtilsGXT3.info("Attention", "Select a valid file to be used as main!");
+		}
+	}
+
+	
+	private void setMainCodeData() {
 		ItemDescription itemDescription = new ItemDescription(selectedItem.getId(), selectedItem.getName(),
 				selectedItem.getOwner(), selectedItem.getPath(), selectedItem.getType().name());
 		MainCodeSetEvent mainCodeSetEvent = new MainCodeSetEvent(itemDescription);
@@ -309,6 +333,25 @@ public class ExplorerProjectPanel extends ContentPanel {
 
 	}
 
+	private void setBinaryCode(SelectEvent event) {
+		Log.debug("Set Code");
+		if (selectedItem != null && selectedItem.getType().compareTo(ItemType.EXTERNAL_FILE) == 0) {
+			setBinaryCodeData();
+		} else {
+			UtilsGXT3.info("Attention", "Select a valid file to be used!");
+		}
+	}
+
+	
+	private void setBinaryCodeData() {
+		ItemDescription itemDescription = new ItemDescription(selectedItem.getId(), selectedItem.getName(),
+				selectedItem.getOwner(), selectedItem.getPath(), selectedItem.getType().name());
+		BinaryCodeSetEvent binaryCodeSetEvent = new BinaryCodeSetEvent(itemDescription);
+		eventBus.fireEvent(binaryCodeSetEvent);
+		Log.debug("Fired: " + binaryCodeSetEvent);
+
+	}
+
 	private void openFile() {
 		if (selectedItem != null && !selectedItem.isFolder()) {
 

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/tools/input/InputOutputVariablesPanel.java

@@ -11,6 +11,7 @@ import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.input.DataTy
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.input.IOType;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.input.InputOutputVariables;
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.Project;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.ProjectSupportBlackBox;
 
 import com.allen_sauer.gwt.log.client.Log;
 import com.google.gwt.cell.client.AbstractCell;
@@ -22,6 +23,8 @@ import com.google.gwt.event.logical.shared.ValueChangeHandler;
 import com.google.gwt.event.shared.EventBus;
 import com.google.gwt.safehtml.shared.SafeHtml;
 import com.google.gwt.safehtml.shared.SafeHtmlBuilder;
+import com.sencha.gxt.cell.core.client.ButtonCell.ButtonScale;
+import com.sencha.gxt.cell.core.client.ButtonCell.IconAlign;
 import com.sencha.gxt.cell.core.client.form.ComboBoxCell.TriggerAction;
 import com.sencha.gxt.core.client.Style.SelectionMode;
 import com.sencha.gxt.core.client.XTemplates;
@@ -36,6 +39,7 @@ import com.sencha.gxt.dnd.core.client.GridDropTarget;
 import com.sencha.gxt.widget.core.client.ContentPanel;
 import com.sencha.gxt.widget.core.client.button.ButtonBar;
 import com.sencha.gxt.widget.core.client.button.TextButton;
+import com.sencha.gxt.widget.core.client.container.BoxLayoutContainer.BoxLayoutData;
 import com.sencha.gxt.widget.core.client.container.MarginData;
 import com.sencha.gxt.widget.core.client.container.VerticalLayoutContainer;
 import com.sencha.gxt.widget.core.client.container.VerticalLayoutContainer.VerticalLayoutData;
@@ -56,6 +60,7 @@ import com.sencha.gxt.widget.core.client.grid.Grid;
 import com.sencha.gxt.widget.core.client.grid.Grid.GridCell;
 import com.sencha.gxt.widget.core.client.grid.GridSelectionModel;
 import com.sencha.gxt.widget.core.client.grid.editing.GridRowEditing;
+import com.sencha.gxt.widget.core.client.toolbar.ToolBar;
 
 /**
  * 
@@ -74,6 +79,7 @@ public class InputOutputVariablesPanel extends ContentPanel {
 	private ListStore<IOType> storeComboIOType;
 	private ComboBox<IOType> comboIOType;
 	private GridRowEditing<InputOutputVariables> gridInputOutputVariablesEditing;
+	private TextButton btnAddVariable;
 	private TextButton btnAdd;
 	private boolean addStatus;
 	private int seq = 0;
@@ -119,8 +125,7 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		}
 
 		// Grid
-		InputOutputVariablesProperties props = GWT
+		InputOutputVariablesProperties props = GWT.create(InputOutputVariablesProperties.class);
-				.create(InputOutputVariablesProperties.class);
 
 		ColumnConfig<InputOutputVariables, String> nameColumn = new ColumnConfig<InputOutputVariables, String>(
 				props.name(), 100, "Name");
@@ -136,10 +141,8 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		dataTypeColumn.setCell(new AbstractCell<DataType>() {
 
 			@Override
-			public void render(Context context, DataType inputType,
+			public void render(Context context, DataType inputType, SafeHtmlBuilder sb) {
-					SafeHtmlBuilder sb) {
+				DataTypeTemplates inputTypeTemplates = GWT.create(DataTypeTemplates.class);
-				DataTypeTemplates inputTypeTemplates = GWT
-						.create(DataTypeTemplates.class);
 				sb.append(inputTypeTemplates.format(inputType.getLabel()));
 			}
 		});
@@ -154,10 +157,8 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		ioTypeColumn.setCell(new AbstractCell<IOType>() {
 
 			@Override
-			public void render(Context context, IOType ioType,
+			public void render(Context context, IOType ioType, SafeHtmlBuilder sb) {
-					SafeHtmlBuilder sb) {
+				IOTypeTemplates ioTypeTemplates = GWT.create(IOTypeTemplates.class);
-				IOTypeTemplates ioTypeTemplates = GWT
-						.create(IOTypeTemplates.class);
 				sb.append(ioTypeTemplates.format(ioType.getLabel()));
 			}
 		});
@@ -169,11 +170,9 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		l.add(defaultValueColumn);
 		l.add(ioTypeColumn);
 
-		ColumnModel<InputOutputVariables> columns = new ColumnModel<InputOutputVariables>(
+		ColumnModel<InputOutputVariables> columns = new ColumnModel<InputOutputVariables>(l);
-				l);
 
-		storeInputOutputVariables = new ListStore<InputOutputVariables>(
+		storeInputOutputVariables = new ListStore<InputOutputVariables>(props.id());
-				props.id());
 
 		/*
 		 * ArrayList<InputOutputVariablesVariables> list = new ArrayList<>();
@@ -186,18 +185,15 @@ public class InputOutputVariablesPanel extends ContentPanel {
 
 		if (project != null && project.getInputData() != null
 				&& project.getInputData().getListInputOutputVariables() != null) {
-			checkOutputParameterOnlyFileTypeIsSupported(project.getInputData()
+			checkOutputParameterOnlyFileTypeIsSupported(project.getInputData().getListInputOutputVariables());
-					.getListInputOutputVariables());
 
-			storeInputOutputVariables.addAll(project.getInputData()
+			storeInputOutputVariables.addAll(project.getInputData().getListInputOutputVariables());
-					.getListInputOutputVariables());
 		}
 
 		final GridSelectionModel<InputOutputVariables> sm = new GridSelectionModel<InputOutputVariables>();
 		sm.setSelectionMode(SelectionMode.SINGLE);
 
-		gridInputOutputVariables = new Grid<InputOutputVariables>(
+		gridInputOutputVariables = new Grid<InputOutputVariables>(storeInputOutputVariables, columns);
-				storeInputOutputVariables, columns);
 		gridInputOutputVariables.setSelectionModel(sm);
 		gridInputOutputVariables.getView().setStripeRows(true);
 		gridInputOutputVariables.getView().setColumnLines(true);
@@ -207,36 +203,30 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		gridInputOutputVariables.setColumnReordering(false);
 
 		// DND
-		GridDragSource<InputOutputVariables> ds = new GridDragSource<InputOutputVariables>(
+		GridDragSource<InputOutputVariables> ds = new GridDragSource<InputOutputVariables>(gridInputOutputVariables);
-				gridInputOutputVariables);
 		ds.addDragStartHandler(new DndDragStartEvent.DndDragStartHandler() {
 
 			@Override
 			public void onDragStart(DndDragStartEvent event) {
 				@SuppressWarnings("unchecked")
-				ArrayList<InputOutputVariables> draggingSelection = (ArrayList<InputOutputVariables>) event
+				ArrayList<InputOutputVariables> draggingSelection = (ArrayList<InputOutputVariables>) event.getData();
-						.getData();
 				Log.debug("Start Drag: " + draggingSelection);
 
 			}
 		});
 
-		GridDropTarget<InputOutputVariables> dt = new GridDropTarget<InputOutputVariables>(
+		GridDropTarget<InputOutputVariables> dt = new GridDropTarget<InputOutputVariables>(gridInputOutputVariables);
-				gridInputOutputVariables);
 		dt.setFeedback(Feedback.BOTH);
 		dt.setAllowSelfAsSource(true);
 
 		// EDITING //
 
 		// DataType
-		DataTypePropertiesCombo dataTypePropertiesCombo = GWT
+		DataTypePropertiesCombo dataTypePropertiesCombo = GWT.create(DataTypePropertiesCombo.class);
-				.create(DataTypePropertiesCombo.class);
 
-		storeComboDataType = new ListStore<DataType>(
+		storeComboDataType = new ListStore<DataType>(dataTypePropertiesCombo.id());
-				dataTypePropertiesCombo.id());
 
-		comboDataType = new ComboBox<DataType>(storeComboDataType,
+		comboDataType = new ComboBox<DataType>(storeComboDataType, dataTypePropertiesCombo.label());
-				dataTypePropertiesCombo.label());
 		comboDataType.setClearValueOnParseError(false);
 		comboDataType.setEditable(false);
 
@@ -248,13 +238,11 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		storeComboDataType.commitChanges();
 
 		// IOType
-		IOTypePropertiesCombo ioTypePropertiesCombo = GWT
+		IOTypePropertiesCombo ioTypePropertiesCombo = GWT.create(IOTypePropertiesCombo.class);
-				.create(IOTypePropertiesCombo.class);
 
 		storeComboIOType = new ListStore<IOType>(ioTypePropertiesCombo.id());
 
-		comboIOType = new ComboBox<IOType>(storeComboIOType,
+		comboIOType = new ComboBox<IOType>(storeComboIOType, ioTypePropertiesCombo.label());
-				ioTypePropertiesCombo.label());
 		comboIOType.setClearValueOnParseError(false);
 		comboIOType.setEditable(false);
 
@@ -267,34 +255,26 @@ public class InputOutputVariablesPanel extends ContentPanel {
 
 		//
 		TextField nameColumnEditing = new TextField();
-		nameColumnEditing.addValidator(new RegExValidator("^[^\"]*$",
+		nameColumnEditing.addValidator(new RegExValidator("^[^\"]*$", "Attention character \" is not allowed"));
-				"Attention character \" is not allowed"));
 		TextField descriptionColumnEditing = new TextField();
-		descriptionColumnEditing.addValidator(new RegExValidator("^[^\"]*$",
+		descriptionColumnEditing.addValidator(new RegExValidator("^[^\"]*$", "Attention character \" is not allowed"));
-				"Attention character \" is not allowed"));
 		TextField defaultValueColumnEditing = new TextField();
 		defaultValueColumnEditing.setAllowBlank(false);
-		defaultValueColumnEditing.addValidator(new RegExValidator(
+		defaultValueColumnEditing.addValidator(
-				"^[^\"\\\\]*(?:\\\\.[^\"\\\\]*)*$",
+				new RegExValidator("^[^\"\\\\]*(?:\\\\.[^\"\\\\]*)*$", "Attention character \" is not allowed"));
-				"Attention character \" is not allowed"));
 
-		gridInputOutputVariablesEditing = new GridRowEditing<InputOutputVariables>(
+		gridInputOutputVariablesEditing = new GridRowEditing<InputOutputVariables>(gridInputOutputVariables);
-				gridInputOutputVariables);
+		gridInputOutputVariablesEditing.addEditor(nameColumn, nameColumnEditing);
-		gridInputOutputVariablesEditing
+		gridInputOutputVariablesEditing.addEditor(descriptionColumn, descriptionColumnEditing);
-				.addEditor(nameColumn, nameColumnEditing);
+		gridInputOutputVariablesEditing.addEditor(dataTypeColumn, comboDataType);
-		gridInputOutputVariablesEditing.addEditor(descriptionColumn,
+		gridInputOutputVariablesEditing.addEditor(defaultValueColumn, defaultValueColumnEditing);
-				descriptionColumnEditing);
-		gridInputOutputVariablesEditing
-				.addEditor(dataTypeColumn, comboDataType);
-		gridInputOutputVariablesEditing.addEditor(defaultValueColumn,
-				defaultValueColumnEditing);
 		gridInputOutputVariablesEditing.addEditor(ioTypeColumn, comboIOType);
 
-		btnAdd = new TextButton();
+		btnAddVariable = new TextButton();
-		btnAdd.setIcon(StatAlgoImporterResources.INSTANCE.add16());
+		btnAddVariable.setIcon(StatAlgoImporterResources.INSTANCE.add16());
 		// btnAdd.setIconAlign(IconAlign.);
-		btnAdd.setToolTip("Add Input/Output Variable");
+		btnAddVariable.setToolTip("Add Input/Output Variable");
-		btnAdd.addSelectHandler(new SelectHandler() {
+		btnAddVariable.addSelectHandler(new SelectHandler() {
 
 			@Override
 			public void onSelect(SelectEvent event) {
@@ -314,15 +294,13 @@ public class InputOutputVariablesPanel extends ContentPanel {
 				storeInputOutputVariables.remove(rowIndex);
 				storeInputOutputVariables.commitChanges();
 
-				gridInputOutputVariablesEditing.getCancelButton().setVisible(
+				gridInputOutputVariablesEditing.getCancelButton().setVisible(true);
-						true);
+				btnAddVariable.setEnabled(true);
-				btnAdd.setEnabled(true);
 				if (addStatus) {
 					addStatus = false;
 				}
 
-				List<InputOutputVariables> listIOVariables = storeInputOutputVariables
+				List<InputOutputVariables> listIOVariables = storeInputOutputVariables.getAll();
-						.getAll();
 				List<InputOutputVariables> listNewIOVariables = new ArrayList<InputOutputVariables>();
 				for (int i = 0; i < listIOVariables.size(); i++) {
 					InputOutputVariables var = listIOVariables.get(i);
@@ -342,81 +320,89 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		ButtonBar buttonBar = gridInputOutputVariablesEditing.getButtonBar();
 		buttonBar.add(btnDelete);
 
-		gridInputOutputVariablesEditing
+		gridInputOutputVariablesEditing.addBeforeStartEditHandler(new BeforeStartEditHandler<InputOutputVariables>() {
-				.addBeforeStartEditHandler(new BeforeStartEditHandler<InputOutputVariables>() {
 
-					@Override
+			@Override
-					public void onBeforeStartEdit(
+			public void onBeforeStartEdit(BeforeStartEditEvent<InputOutputVariables> event) {
-							BeforeStartEditEvent<InputOutputVariables> event) {
+				editingBeforeStart(event);
-						editingBeforeStart(event);
 
+			}
+		});
+
+		gridInputOutputVariablesEditing.addCancelEditHandler(new CancelEditHandler<InputOutputVariables>() {
+
+			@Override
+			public void onCancelEdit(CancelEditEvent<InputOutputVariables> event) {
+				storeInputOutputVariables.rejectChanges();
+				btnAddVariable.setEnabled(true);
+
+			}
+
+		});
+
+		gridInputOutputVariablesEditing.addCompleteEditHandler(new CompleteEditHandler<InputOutputVariables>() {
+
+			@Override
+			public void onCompleteEdit(CompleteEditEvent<InputOutputVariables> event) {
+				try {
+					if (addStatus) {
+						addStatus = false;
 					}
-				});
+					storeInputOutputVariables.commitChanges();
 
-		gridInputOutputVariablesEditing
+					gridInputOutputVariablesEditing.getCancelButton().setVisible(true);
-				.addCancelEditHandler(new CancelEditHandler<InputOutputVariables>() {
+					btnAddVariable.setEnabled(true);
 
-					@Override
+				} catch (Throwable e) {
-					public void onCancelEdit(
+					Log.error("Error: " + e.getLocalizedMessage());
-							CancelEditEvent<InputOutputVariables> event) {
+					e.printStackTrace();
-						storeInputOutputVariables.rejectChanges();
+				}
-						btnAdd.setEnabled(true);
+			}
+		});
 
-					}
-
-				});
-
-		gridInputOutputVariablesEditing
-				.addCompleteEditHandler(new CompleteEditHandler<InputOutputVariables>() {
-
-					@Override
-					public void onCompleteEdit(
-							CompleteEditEvent<InputOutputVariables> event) {
-						try {
-							if (addStatus) {
-								addStatus = false;
-							}
-							storeInputOutputVariables.commitChanges();
-
-							gridInputOutputVariablesEditing.getCancelButton()
-									.setVisible(true);
-							btnAdd.setEnabled(true);
-
-						} catch (Throwable e) {
-							Log.error("Error: " + e.getLocalizedMessage());
-							e.printStackTrace();
-						}
-					}
-				});
-
-		// ToolBar toolBar = new ToolBar();
-		// toolBar.add(btnAdd, new BoxLayoutData(new Margins(0)));
 
 		VerticalLayoutContainer vlc = new VerticalLayoutContainer();
 		vlc.setAdjustForScroll(false);
 		vlc.setScrollMode(ScrollMode.NONE);
 
-		// vlc.add(toolBar, new VerticalLayoutData(1, -1, new Margins(0)));
+		if (project != null && project.getProjectConfig() != null
-		vlc.add(gridInputOutputVariables, new VerticalLayoutData(1, 1,
+				&& project.getProjectConfig().getProjectSupport() != null) {
-				new Margins(0)));
+			if (project.getProjectConfig().getProjectSupport() instanceof ProjectSupportBlackBox) {
+
+				btnAdd = new TextButton("Add");
+				btnAdd.setIcon(StatAlgoImporterResources.INSTANCE.add16());
+				btnAdd.setScale(ButtonScale.SMALL);
+				btnAdd.setIconAlign(IconAlign.LEFT);
+				btnAdd.setToolTip("Add Input/Output");
+				btnAdd.addSelectHandler(new SelectHandler() {
+
+					@Override
+					public void onSelect(SelectEvent event) {
+						addInputOutputVariable(event);
+					}
+
+				});
+
+				ToolBar toolBar = new ToolBar();
+				toolBar.add(btnAdd, new BoxLayoutData(new Margins(0)));
+				vlc.add(toolBar, new VerticalLayoutData(1, -1, new Margins(0)));
+				
+			}
+		}
+		vlc.add(gridInputOutputVariables, new VerticalLayoutData(1, 1, new Margins(0)));
 
 		add(vlc, new MarginData(new Margins(0)));
 
 	}
 
-	private void editingBeforeStart(
+	private void editingBeforeStart(BeforeStartEditEvent<InputOutputVariables> event) {
-			BeforeStartEditEvent<InputOutputVariables> event) {
+		if (storeInputOutputVariables != null && storeInputOutputVariables.size() > 0) {
-		if (storeInputOutputVariables != null
-				&& storeInputOutputVariables.size() > 0) {
 
 			int rowIndex = event.getEditCell().getRow();
 
-			InputOutputVariables currentInputOutputVariable = storeInputOutputVariables
+			InputOutputVariables currentInputOutputVariable = storeInputOutputVariables.get(rowIndex);
-					.get(rowIndex);
+			if (currentInputOutputVariable != null && currentInputOutputVariable.getIoType() != null
-			if (currentInputOutputVariable != null
+					&& currentInputOutputVariable.getIoType().compareTo(IOType.OUTPUT) == 0) {
-					&& currentInputOutputVariable.getIoType() != null
-					&& currentInputOutputVariable.getIoType().compareTo(
-							IOType.OUTPUT) == 0) {		
 				storeComboDataType.clear();
 				storeComboDataType.add(DataType.FILE);
 				storeComboDataType.commitChanges();
@@ -432,14 +418,12 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		}
 	}
 
-	private void addHandlersForComboDataType(
+	private void addHandlersForComboDataType(LabelProvider<DataType> labelProvider) {
-			LabelProvider<DataType> labelProvider) {
 		comboDataType.addValueChangeHandler(new ValueChangeHandler<DataType>() {
 
 			@Override
 			public void onValueChange(ValueChangeEvent<DataType> event) {
 
-				
 			}
 		});
 
@@ -451,7 +435,6 @@ public class InputOutputVariablesPanel extends ContentPanel {
 			}
 		});
 
-		
 	}
 
 	private void addHandlersForComboIOType(LabelProvider<IOType> labelProvider) {
@@ -505,7 +488,7 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		storeComboDataType.add(DataType.FILE);
 		storeComboDataType.commitChanges();
 		comboDataType.clear();
-		comboDataType.setValue(DataType.FILE,true,true);
+		comboDataType.setValue(DataType.FILE, true, true);
 	}
 
 	private void setComboForInputParameter() {
@@ -514,8 +497,7 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		storeComboDataType.commitChanges();
 	}
 
-	public void addNewInputOutputVariables(
+	public void addNewInputOutputVariables(InputOutputVariables inputOutputVariable) {
-			InputOutputVariables inputOutputVariable) {
 		try {
 			Log.debug("Current Seq: " + seq);
 			seq++;
@@ -539,16 +521,14 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		try {
 			Log.debug("Current Seq: " + seq);
 			seq++;
-			InputOutputVariables newInputOutputVariablesVariable = new InputOutputVariables(
+			InputOutputVariables newInputOutputVariablesVariable = new InputOutputVariables(seq, "", "", "",
-					seq, "", "", "", DataType.STRING, IOType.INPUT, "");
+					DataType.STRING, IOType.INPUT, "");
-			Log.debug("New Input/Output Variable: "
+			Log.debug("New Input/Output Variable: " + newInputOutputVariablesVariable);
-					+ newInputOutputVariablesVariable);
 			gridInputOutputVariablesEditing.cancelEditing();
 			addStatus = true;
 			gridInputOutputVariablesEditing.getCancelButton().setVisible(false);
 			storeInputOutputVariables.add(newInputOutputVariablesVariable);
-			int row = storeInputOutputVariables
+			int row = storeInputOutputVariables.indexOf(newInputOutputVariablesVariable);
-					.indexOf(newInputOutputVariablesVariable);
 
 			storeComboDataType.clear();
 			storeComboDataType.addAll(DataType.asList());
@@ -568,12 +548,10 @@ public class InputOutputVariablesPanel extends ContentPanel {
 		Log.debug("Update Input/Output Variables: " + project);
 		if (project != null && project.getInputData() != null
 				&& project.getInputData().getListInputOutputVariables() != null) {
-			checkOutputParameterOnlyFileTypeIsSupported(project.getInputData()
+			checkOutputParameterOnlyFileTypeIsSupported(project.getInputData().getListInputOutputVariables());
-					.getListInputOutputVariables());
 
 			storeInputOutputVariables.clear();
-			storeInputOutputVariables.addAll(project.getInputData()
+			storeInputOutputVariables.addAll(project.getInputData().getListInputOutputVariables());
-					.getListInputOutputVariables());
 			storeInputOutputVariables.commitChanges();
 			seq = project.getInputData().getListInputOutputVariables().size();
 
@@ -585,13 +563,10 @@ public class InputOutputVariablesPanel extends ContentPanel {
 
 	}
 
-	private void checkOutputParameterOnlyFileTypeIsSupported(
+	private void checkOutputParameterOnlyFileTypeIsSupported(ArrayList<InputOutputVariables> inputOutputVarialbles) {
-			ArrayList<InputOutputVariables> inputOutputVarialbles) {
 		for (InputOutputVariables ioVariable : inputOutputVarialbles) {
-			if (ioVariable.getIoType() != null
+			if (ioVariable.getIoType() != null && ioVariable.getIoType().compareTo(IOType.OUTPUT) == 0) {
-					&& ioVariable.getIoType().compareTo(IOType.OUTPUT) == 0) {
+				if (ioVariable.getDataType() == null || ioVariable.getDataType().compareTo(DataType.FILE) != 0) {
-				if (ioVariable.getDataType() == null
-						|| ioVariable.getDataType().compareTo(DataType.FILE) != 0) {
 					ioVariable.setDataType(DataType.FILE);
 				}
 			}

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/tools/input/InputVariablePanel.java

@@ -129,6 +129,8 @@ public class InputVariablePanel extends ContentPanel {
 		case MAIN_CODE_SET:
 			setMainCode(event.getProject());
 			break;
+		case BINARY_CODE_SET:
+			setBinaryCode(event.getProject());	
 		default:
 			break;
 		}
@@ -167,4 +169,10 @@ public class InputVariablePanel extends ContentPanel {
 
 	}
 	
+	private void setBinaryCode(Project project) {
+		inputVariableTabPanel.setBinaryCode(project);
+		Log.debug("ToolBoxPanel Updated");
+
+	}
+
 }

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/tools/input/InputVariableTabPanel.java

@@ -90,6 +90,22 @@ public class InputVariableTabPanel extends TabPanel {
 
 	}
 	
+	public void setBinaryCode(Project project) {
+		try {
+			globalVariablesPanel.update(project);
+			inputOutputVariablesPanel.update(project);
+			projectInfoPanel.update(project);
+			interpreterInfoPanel.update(project);
+			forceLayout();
+		} catch (Throwable e) {
+			Log.error("Error in InputVariableTabPanel: "
+					+ e.getLocalizedMessage());
+			e.printStackTrace();
+		}
+
+	}
+	
+
 	public void updateTabs(Project project) {
 		try {
 			globalVariablesPanel.update(project);

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/type/ProjectStatusEventType.java

@@ -7,16 +7,5 @@ package org.gcube.portlets.user.statisticalalgorithmsimporter.client.type;
  *
  */
 public enum ProjectStatusEventType {
-	START,
+	START, OPEN, MAIN_CODE_SET, BINARY_CODE_SET, UPDATE, ADD_RESOURCE, DELETE_RESOURCE, DELETE_MAIN_CODE, SOFTWARE_CREATED, SOFTWARE_PUBLISH, SOFTWARE_REPACKAGE, EXPLORER_REFRESH, SAVE;
-	OPEN,
-	MAIN_CODE_SET,
-	UPDATE,
-	ADD_RESOURCE,
-	DELETE_RESOURCE,
-	DELETE_MAIN_CODE,
-	SOFTWARE_CREATED,
-	SOFTWARE_PUBLISH,
-	SOFTWARE_REPACKAGE,
-	EXPLORER_REFRESH,
-	SAVE;
 }

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/client/workarea/WorkAreaPanel.java

@@ -9,6 +9,8 @@ import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.Proj
 import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.ProjectSupportBlackBox;
 
 import com.allen_sauer.gwt.log.client.Log;
+import com.google.gwt.core.client.Scheduler;
+import com.google.gwt.core.client.Scheduler.ScheduledCommand;
 import com.google.gwt.event.shared.EventBus;
 import com.sencha.gxt.core.client.util.Margins;
 import com.sencha.gxt.widget.core.client.container.BorderLayoutContainer;
@@ -133,11 +135,20 @@ public class WorkAreaPanel extends SimpleContainer {
 
 	}
 
-	private void fireProjectStatusOpenEvent(Project project) {
+	private void fireProjectStatusOpenEvent(final Project project) {
 		try {
-			ProjectStatusEvent projectStatusEvent = new ProjectStatusEvent(ProjectStatusEventType.OPEN, project);
+			Scheduler.get().scheduleDeferred(new ScheduledCommand() {
-			Log.debug("Work Area Panel ProjectStatusEvent fire! " + projectStatusEvent);
+				
-			eventBus.fireEvent(projectStatusEvent);
+				@Override
+				public void execute() {
+					ProjectStatusEvent projectStatusEvent = new ProjectStatusEvent(ProjectStatusEventType.OPEN, project);
+					Log.debug("Work Area Panel ProjectStatusEvent fire! " + projectStatusEvent);
+					eventBus.fireEvent(projectStatusEvent);
+					
+				}
+			});
+			
+			
 		} catch (Throwable e) {
 			Log.error(e.getLocalizedMessage(), e);
 		}

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/server/StatAlgoImporterServiceImpl.java

@@ -46,11 +46,9 @@ import com.google.gwt.user.server.rpc.RemoteServiceServlet;
  * The server side implementation of the RPC service.
  */
 @SuppressWarnings("serial")
-public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
+public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements StatAlgoImporterService {
-		StatAlgoImporterService {
 
-	private static Logger logger = LoggerFactory
+	private static Logger logger = LoggerFactory.getLogger(StatAlgoImporterServiceImpl.class);
-			.getLogger(StatAlgoImporterServiceImpl.class);
 
 	/**
 	 * 
@@ -65,13 +63,11 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 
 		System.out.println("initializing StatAlgoImporterService");
 		String notificationRecipientsFile = "/statalgoimporter/properties/NotificationRecipients.txt";
-		InputStream notificationRecipientsInputStream = this
+		InputStream notificationRecipientsInputStream = this.getServletContext()
-				.getServletContext().getResourceAsStream(
+				.getResourceAsStream(notificationRecipientsFile);
-						notificationRecipientsFile);
 		String text = null;
 		try {
-			text = IOUtils.toString(notificationRecipientsInputStream,
+			text = IOUtils.toString(notificationRecipientsInputStream, StandardCharsets.UTF_8.name());
-					StandardCharsets.UTF_8.name());
 		} catch (IOException e) {
 			System.out.println(e.getLocalizedMessage());
 			System.out.println(e.getStackTrace().toString());
@@ -104,14 +100,10 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	@Override
 	public UserInfo hello() throws StatAlgoImporterServiceException {
 		try {
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(this.getThreadLocalRequest());
-					.getServiceCredentials(this.getThreadLocalRequest());
 			logger.debug("hello()");
-			UserInfo userInfo = new UserInfo(serviceCredentials.getUserName(),
+			UserInfo userInfo = new UserInfo(serviceCredentials.getUserName(), serviceCredentials.getGroupId(),
-					serviceCredentials.getGroupId(),
+					serviceCredentials.getGroupName(), serviceCredentials.getScope(), serviceCredentials.getEmail(),
-					serviceCredentials.getGroupName(),
-					serviceCredentials.getScope(),
-					serviceCredentials.getEmail(),
 					serviceCredentials.getFullName());
 			logger.debug("UserInfo: " + userInfo);
 			return userInfo;
@@ -126,40 +118,34 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 
 	}
 
-	
-	
 	@Override
 	public SAIDescriptor getSAIDescripor() throws StatAlgoImporterServiceException {
 		HttpServletRequest httpRequest = null;
 		try {
 			httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("getSAIDescriptor()");
-			SAIDescriptor saiDescriptor=BuildSAIDescriptor.build(serviceCredentials.getScope());
+			SAIDescriptor saiDescriptor = BuildSAIDescriptor.build(serviceCredentials.getScope());
 			return saiDescriptor;
 
 		} catch (StatAlgoImporterServiceException e) {
-			logger.error("Error retrieving SAI descriptor: "+e.getLocalizedMessage(),e);
+			logger.error("Error retrieving SAI descriptor: " + e.getLocalizedMessage(), e);
 			throw e;
 		} catch (Throwable e) {
-			logger.error("Error retrieving SAI descriptor: "+e.getLocalizedMessage(),e);
+			logger.error("Error retrieving SAI descriptor: " + e.getLocalizedMessage(), e);
-			throw new StatAlgoImporterServiceException(e.getLocalizedMessage(),e);
+			throw new StatAlgoImporterServiceException(e.getLocalizedMessage(), e);
 		}
 
 	}
 
 	@Override
-	public Project restoreUISession(String value)
+	public Project restoreUISession(String value) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		HttpServletRequest httpRequest = null;
 		try {
 			httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("restoreUISession(): " + value);
-			Project project = SessionUtil.getProjectSession(httpRequest,
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
 			return project;
 		} catch (StatAlgoImporterServiceException e) {
 			e.printStackTrace();
@@ -172,30 +158,25 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 
 	}
 
-
 	/**
 	 * 
 	 * {@inheritDoc}
 	 * 
 	 */
 	@Override
-	public FileUploadMonitor getFileUploadMonitor()
+	public FileUploadMonitor getFileUploadMonitor() throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 
 		HttpServletRequest httpRequest = this.getThreadLocalRequest();
-		ServiceCredentials serviceCredentials = SessionUtil
+		ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-				.getServiceCredentials(httpRequest);
 
 		FileUploadMonitor fileUploadMonitor = null;
 		try {
-			fileUploadMonitor = SessionUtil.getFileUploadMonitor(httpRequest,
+			fileUploadMonitor = SessionUtil.getFileUploadMonitor(httpRequest, serviceCredentials);
-					serviceCredentials);
 		} catch (Exception e) {
 			logger.error("Error retrieving the fileUploadMonitor", e);
 		}
 		if (fileUploadMonitor == null) {
-			throw new StatAlgoImporterServiceException(
+			throw new StatAlgoImporterServiceException("Error retrieving the fileUploadMonitor: null");
-					"Error retrieving the fileUploadMonitor: null");
 		}
 
 		logger.debug("FileUploadMonitor: " + fileUploadMonitor);
@@ -209,24 +190,19 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	 * 
 	 */
 	@Override
-	public ArrayList<CodeData> getCode()
+	public ArrayList<CodeData> getCode() throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 
 			logger.debug("getCode()");
-			Project projectSession = SessionUtil.getProjectSession(httpRequest,
+			Project projectSession = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
 			if (projectSession != null) {
-				CodeReader codeFileReader = new CodeReader(projectSession,
+				CodeReader codeFileReader = new CodeReader(projectSession, serviceCredentials);
-						serviceCredentials);
 				ArrayList<CodeData> codeList = codeFileReader.getCodeList();
 				for (CodeData codeData : codeList) {
-					logger.debug("" + codeData.getId() + " "
+					logger.debug("" + codeData.getId() + " " + codeData.getCodeLine());
-							+ codeData.getCodeLine());
 				}
 				return codeList;
 			} else {
@@ -253,26 +229,24 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("createProjectOnWorkspace(): " + projectCreateSession);
 			Project project;
-			if (ProjectArchiver.existProjectInFolder(projectCreateSession.getNewProjectFolder(),
+			if (ProjectArchiver.existProjectInFolder(projectCreateSession.getNewProjectFolder(), serviceCredentials)) {
-					serviceCredentials)) {
 				throw new StatAlgoImporterServiceException(
 						"Attention a project is present in this folder, use open or another folder!");
 			} else {
 				ProjectFolder projectFolder = new ProjectFolder(projectCreateSession.getNewProjectFolder());
-				ProjectConfig projectConfig=null;
+				ProjectConfig projectConfig = null;
 				if (projectCreateSession.getProjectSetup() != null
 						&& projectCreateSession.getProjectSetup().getProjectSupportType() != null) {
-					switch(projectCreateSession.getProjectSetup().getProjectSupportType()){
+					switch (projectCreateSession.getProjectSetup().getProjectSupportType()) {
 					case BlackBox:
-						projectConfig=new ProjectConfig(projectCreateSession.getProjectSetup().getLanguage(),
+						projectConfig = new ProjectConfig(projectCreateSession.getProjectSetup().getLanguage(),
 								new ProjectSupportBlackBox());
 						break;
 					case REdit:
-						projectConfig=new ProjectConfig(projectCreateSession.getProjectSetup().getLanguage(),
+						projectConfig = new ProjectConfig(projectCreateSession.getProjectSetup().getLanguage(),
 								new ProjectSupportREdit());
 						break;
 					default:
@@ -280,9 +254,8 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 
 					}
 				}
-				project = new Project(projectFolder,projectConfig);
+				project = new Project(projectFolder, projectConfig);
-				SessionUtil.setProjectSession(httpRequest, serviceCredentials,
+				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-						project);
 
 			}
 
@@ -292,34 +265,28 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 			e.printStackTrace();
 			throw e;
 		} catch (Throwable e) {
-			logger.error(
+			logger.error("createProjectOnWorkspace(): " + e.getLocalizedMessage(), e);
-					"createProjectOnWorkspace(): " + e.getLocalizedMessage(), e);
 			e.printStackTrace();
 			throw new StatAlgoImporterServiceException(e.getLocalizedMessage());
 		}
 	}
 
 	@Override
-	public Project openProjectOnWorkspace(ItemDescription newProjectFolder)
+	public Project openProjectOnWorkspace(ItemDescription newProjectFolder) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("openProjectOnWorkspace()");
 
-			Project project = ProjectArchiver.readProject(newProjectFolder,
+			Project project = ProjectArchiver.readProject(newProjectFolder, serviceCredentials);
-					serviceCredentials);
+			SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-			SessionUtil.setProjectSession(httpRequest, serviceCredentials,
-					project);
 
 			return project;
 		} catch (StatAlgoImporterServiceException e) {
 			e.printStackTrace();
 			throw e;
 		} catch (Throwable e) {
-			logger.error(
+			logger.error("openProjectOnWorkspace(): " + e.getLocalizedMessage(), e);
-					"openProjectOnWorkspace(): " + e.getLocalizedMessage(), e);
 			e.printStackTrace();
 			throw new StatAlgoImporterServiceException(e.getLocalizedMessage());
 		}
@@ -327,24 +294,19 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	}
 
 	@Override
-	public Project setMainCode(ItemDescription itemDescription)
+	public Project setMainCode(ItemDescription itemDescription) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("SetMainCode(): " + itemDescription);
-			Project project = SessionUtil.getProjectSession(httpRequest,
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
 			if (project != null) {
 				project.setMainCode(new MainCode(itemDescription));
 				project.setInputData(null);
 				project.setProjectTarget(null);
-				WPS4RParser wps4Parser = new WPS4RParser(project,
+				WPS4RParser wps4Parser = new WPS4RParser(project, serviceCredentials);
-						serviceCredentials);
 				project = wps4Parser.parse();
-				SessionUtil.setProjectSession(httpRequest, serviceCredentials,
+				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-						project);
 				logger.debug("Project: " + project);
 			} else {
 				throw new StatAlgoImporterServiceException("No project open!");
@@ -363,27 +325,57 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	}
 
 	@Override
-	public void addResourceToProject(ItemDescription itemDescription)
+	public Project setBinaryCode(ItemDescription itemDescription) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
+			logger.debug("SetBinaryCode(): " + itemDescription);
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
+			if (project != null && project.getProjectConfig() != null) {
+				ProjectSupportBlackBox projectSupportBlackBox;
+				if (project.getProjectConfig().getProjectSupport() != null
+						&& project.getProjectConfig().getProjectSupport() instanceof ProjectSupportBlackBox) {
+					projectSupportBlackBox = (ProjectSupportBlackBox) project.getProjectConfig().getProjectSupport();
+					projectSupportBlackBox.setBinaryItem(itemDescription);
+
+					SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
+					logger.debug("Project: " + project);
+				} else {
+					throw new StatAlgoImporterServiceException("Error in project setup!");
+				}
+			} else {
+				throw new StatAlgoImporterServiceException("No project open!");
+			}
+
+			return project;
+		} catch (StatAlgoImporterServiceException e) {
+			e.printStackTrace();
+			throw e;
+		} catch (Throwable e) {
+			logger.error("setBinaryCode(): " + e.getLocalizedMessage(), e);
+			e.printStackTrace();
+			throw new StatAlgoImporterServiceException(e.getLocalizedMessage());
+		}
+
+	}
+
+	@Override
+	public void addResourceToProject(ItemDescription itemDescription) throws StatAlgoImporterServiceException {
+		try {
+			HttpServletRequest httpRequest = this.getThreadLocalRequest();
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
 			logger.debug("addResourceToProject(): " + itemDescription);
 			if (itemDescription == null || itemDescription.getId() == null) {
 				throw new StatAlgoImporterServiceException(
-						"Add resource to project is failed, invalid resource: "
+						"Add resource to project is failed, invalid resource: " + itemDescription);
-								+ itemDescription);
 			}
 
-			Project project = SessionUtil.getProjectSession(httpRequest,
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
 			if (project != null && project.getProjectFolder() != null
 					&& project.getProjectFolder().getFolder() != null) {
 				FilesStorage fileStorage = new FilesStorage();
-				fileStorage.copyItemOnFolder(serviceCredentials.getUserName(),
+				fileStorage.copyItemOnFolder(serviceCredentials.getUserName(), itemDescription.getId(),
-						itemDescription.getId(), project.getProjectFolder()
+						project.getProjectFolder().getFolder().getId());
-								.getFolder().getId());
 			} else {
 				throw new StatAlgoImporterServiceException("No project open!");
 			}
@@ -393,8 +385,7 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 			e.printStackTrace();
 			throw e;
 		} catch (Throwable e) {
-			logger.error("addResourceToProject(): " + e.getLocalizedMessage(),
+			logger.error("addResourceToProject(): " + e.getLocalizedMessage(), e);
-					e);
 			e.printStackTrace();
 			throw new StatAlgoImporterServiceException(e.getLocalizedMessage());
 		}
@@ -402,109 +393,76 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	}
 
 	@Override
-	public Project deleteResourceOnProject(ItemDescription itemDescription)
+	public Project deleteResourceOnProject(ItemDescription itemDescription) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 
 			logger.debug("deleteResourceOnProject(): " + itemDescription);
 			if (itemDescription == null || itemDescription.getId() == null) {
 				throw new StatAlgoImporterServiceException(
-						"Delete resource on project is failed, invalid resource: "
+						"Delete resource on project is failed, invalid resource: " + itemDescription);
-								+ itemDescription);
 			}
 
-			Project project = SessionUtil.getProjectSession(httpRequest,
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
+			checkProjectInfoForDelete(itemDescription, httpRequest, serviceCredentials, project);
-			checkProjectInfoForDelete(itemDescription, httpRequest,
-					serviceCredentials, project);
 			FilesStorage fileStorage = new FilesStorage();
-			fileStorage.deleteItemOnFolder(serviceCredentials.getUserName(),
+			fileStorage.deleteItemOnFolder(serviceCredentials.getUserName(), itemDescription.getId());
-					itemDescription.getId());
 			return project;
 
 		} catch (StatAlgoImporterServiceException e) {
 			e.printStackTrace();
 			throw e;
 		} catch (Throwable e) {
-			logger.error(
+			logger.error("deleteResourceOnProject(): " + e.getLocalizedMessage(), e);
-					"deleteResourceOnProject(): " + e.getLocalizedMessage(), e);
 			e.printStackTrace();
 			throw new StatAlgoImporterServiceException(e.getLocalizedMessage());
 		}
 
 	}
 
-	private void checkProjectInfoForDelete(ItemDescription itemDescription,
+	private void checkProjectInfoForDelete(ItemDescription itemDescription, HttpServletRequest httpRequest,
-			HttpServletRequest httpRequest,
 			ServiceCredentials serviceCredentials, Project project)
-			throws StatAlgoImporterSessionExpiredException,
+			throws StatAlgoImporterSessionExpiredException, StatAlgoImporterServiceException {
-			StatAlgoImporterServiceException {
 		if (project != null) {
-			if (project.getMainCode() != null
+			if (project.getMainCode() != null && project.getMainCode().getItemDescription() != null
-					&& project.getMainCode().getItemDescription() != null
+					&& project.getMainCode().getItemDescription().getId().compareTo(itemDescription.getId()) == 0) {
-					&& project.getMainCode().getItemDescription().getId()
-							.compareTo(itemDescription.getId()) == 0) {
 				project.setMainCode(null);
 				project.setInputData(null);
 				project.setProjectTarget(null);
-				SessionUtil.setProjectSession(httpRequest, serviceCredentials,
+				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-						project);
 				ProjectArchiver.archive(project, serviceCredentials);
 			} else {
-				if (project.getProjectTarget() != null
+				if (project.getProjectTarget() != null && project.getProjectTarget().getFolder() != null
-						&& project.getProjectTarget().getFolder() != null
+						&& project.getProjectTarget().getFolder().getId().compareTo(itemDescription.getId()) == 0) {
-						&& project.getProjectTarget().getFolder().getId()
-								.compareTo(itemDescription.getId()) == 0) {
 					project.setProjectTarget(null);
-					SessionUtil.setProjectSession(httpRequest,
+					SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-							serviceCredentials, project);
 					ProjectArchiver.archive(project, serviceCredentials);
 				} else {
-					if (project.getProjectTarget() != null
+					if (project.getProjectTarget() != null && project.getProjectTarget().getProjectCompile() != null
-							&& project.getProjectTarget().getProjectCompile() != null
+							&& project.getProjectTarget().getProjectCompile().getFolder() != null
-							&& project.getProjectTarget().getProjectCompile()
+							&& project.getProjectTarget().getProjectCompile().getFolder().getId()
-									.getFolder() != null
-							&& project.getProjectTarget().getProjectCompile()
-									.getFolder().getId()
 									.compareTo(itemDescription.getId()) == 0) {
 						project.getProjectTarget().setProjectCompile(null);
-						SessionUtil.setProjectSession(httpRequest,
+						SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-								serviceCredentials, project);
 						ProjectArchiver.archive(project, serviceCredentials);
 					} else {
-						if (project.getProjectTarget() != null
+						if (project.getProjectTarget() != null && project.getProjectTarget().getProjectDeploy() != null
-								&& project.getProjectTarget()
+								&& project.getProjectTarget().getProjectDeploy().getFolder() != null
-										.getProjectDeploy() != null
+								&& project.getProjectTarget().getProjectDeploy().getFolder().getId()
-								&& project.getProjectTarget()
-										.getProjectDeploy().getFolder() != null
-								&& project.getProjectTarget()
-										.getProjectDeploy().getFolder().getId()
 										.compareTo(itemDescription.getId()) == 0) {
 							project.getProjectTarget().setProjectDeploy(null);
-							SessionUtil.setProjectSession(httpRequest,
+							SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-									serviceCredentials, project);
+							ProjectArchiver.archive(project, serviceCredentials);
-							ProjectArchiver
-									.archive(project, serviceCredentials);
 						} else {
 							if (project.getProjectTarget() != null
-									&& project.getProjectTarget()
+									&& project.getProjectTarget().getProjectDeploy() != null
-											.getProjectDeploy() != null
+									&& project.getProjectTarget().getProjectDeploy().getPackageProject() != null
-									&& project.getProjectTarget()
+									&& project.getProjectTarget().getProjectDeploy().getPackageProject().getId()
-											.getProjectDeploy()
-											.getPackageProject() != null
-									&& project.getProjectTarget()
-											.getProjectDeploy()
-											.getPackageProject().getId()
 											.compareTo(itemDescription.getId()) == 0) {
-								project.getProjectTarget().getProjectDeploy()
+								project.getProjectTarget().getProjectDeploy().setPackageProject(null);
-										.setPackageProject(null);
+								SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-								SessionUtil.setProjectSession(httpRequest,
+								ProjectArchiver.archive(project, serviceCredentials);
-										serviceCredentials, project);
-								ProjectArchiver.archive(project,
-										serviceCredentials);
 							} else {
 
 							}
@@ -518,20 +476,16 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	}
 
 	@Override
-	public void saveProject(InputData inputData)
+	public void saveProject(InputData inputData) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 
 			logger.debug("saveProject():" + inputData);
-			Project project = SessionUtil.getProjectSession(httpRequest,
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
 			if (project != null) {
 				project.setInputData(inputData);
-				SessionUtil.setProjectSession(httpRequest, serviceCredentials,
+				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-						project);
 				ProjectArchiver.archive(project, serviceCredentials);
 			} else {
 				throw new StatAlgoImporterServiceException("No project open!");
@@ -553,21 +507,17 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	public void saveCode(String code) throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 
 			logger.debug("saveCode():" + code);
-			Project project = SessionUtil.getProjectSession(httpRequest,
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
 			if (project != null) {
 				MainCode mainCode = project.getMainCode();
 				if (mainCode == null || mainCode.getItemDescription() == null) {
-					throw new StatAlgoImporterServiceException(
+					throw new StatAlgoImporterServiceException("No main code set!");
-							"No main code set!");
 				} else {
 					MainCodeSave mainCodeSave = new MainCodeSave();
-					mainCodeSave.save(serviceCredentials,
+					mainCodeSave.save(serviceCredentials, mainCode.getItemDescription(), code, project);
-							mainCode.getItemDescription(), code, project);
 				}
 			} else {
 				throw new StatAlgoImporterServiceException("No project open!");
@@ -590,26 +540,21 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
+			logger.debug("saveCode(): itemDescription" + fileDescription + ", code:" + code);
-			logger.debug("saveCode(): itemDescription" + fileDescription
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					+ ", code:" + code);
-			Project project = SessionUtil.getProjectSession(httpRequest,
-					serviceCredentials);
 			if (project != null && project.getProjectFolder() != null
 					&& project.getProjectFolder().getFolder() != null) {
 				MainCodeSave mainCodeSave = new MainCodeSave();
-				ItemDescription mainCodeItemDescription = mainCodeSave.saveNew(
+				ItemDescription mainCodeItemDescription = mainCodeSave.saveNew(serviceCredentials, fileDescription,
-						serviceCredentials, fileDescription, code, project);
+						code, project);
 				MainCode mainCode = new MainCode(mainCodeItemDescription);
 				project.setMainCode(mainCode);
 				project.setInputData(null);
 				project.setProjectTarget(null);
-				WPS4RParser wps4Parser = new WPS4RParser(project,
+				WPS4RParser wps4Parser = new WPS4RParser(project, serviceCredentials);
-						serviceCredentials);
 				project = wps4Parser.parse();
-				SessionUtil.setProjectSession(httpRequest, serviceCredentials,
+				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-						project);
 				return project;
 			} else {
 				throw new StatAlgoImporterServiceException("No project open!");
@@ -627,24 +572,18 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	}
 
 	@Override
-	public void createSoftware(InputData inputData)
+	public void createSoftware(InputData inputData) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("createSoftware(): " + inputData);
-			Project project = SessionUtil.getProjectSession(httpRequest,
+			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
-					serviceCredentials);
 			if (project != null) {
 				project.setInputData(inputData);
-				SessionUtil.setProjectSession(httpRequest, serviceCredentials,
+				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-						project);
+				ProjectBuilder projectBuilder = new ProjectBuilder(project, serviceCredentials);
-				ProjectBuilder projectBuilder = new ProjectBuilder(project,
-						serviceCredentials);
 				project = projectBuilder.buildTarget();
-				SessionUtil.setProjectSession(httpRequest, serviceCredentials,
+				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
-						project);
 				ProjectArchiver.archive(project, serviceCredentials);
 			} else {
 				throw new StatAlgoImporterServiceException("No project open!");
@@ -663,16 +602,13 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	}
 
 	@Override
-	public String getPublicLink(ItemDescription itemDescription)
+	public String getPublicLink(ItemDescription itemDescription) throws StatAlgoImporterServiceException {
-			throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("GetPublicLink(): " + itemDescription);
 			FilesStorage filesStorage = new FilesStorage();
-			String link = filesStorage.getPublicLink(
+			String link = filesStorage.getPublicLink(serviceCredentials.getUserName(), itemDescription.getId());
-					serviceCredentials.getUserName(), itemDescription.getId());
 
 			return link;
 		} catch (StatAlgoImporterServiceException e) {
@@ -689,21 +625,17 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	public void publishSoftware() throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("PublishSoftware()");
-			ArrayList<Recipient> recipients = SessionUtil
+			ArrayList<Recipient> recipients = SessionUtil.getRecipients(httpRequest.getServletContext());
-					.getRecipients(httpRequest.getServletContext());
 			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
 			if (project != null) {
-				ProjectBuilder projectBuilder = new ProjectBuilder(project,
+				ProjectBuilder projectBuilder = new ProjectBuilder(project, serviceCredentials);
-						serviceCredentials);
 				project = projectBuilder.buildDeploy();
 				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
 				ProjectArchiver.archive(project, serviceCredentials);
-				AlgorithmNotification notify = new AlgorithmNotification(
+				AlgorithmNotification notify = new AlgorithmNotification(this.getThreadLocalRequest(),
-						this.getThreadLocalRequest(), serviceCredentials,
+						serviceCredentials, project, recipients);
-						project, recipients);
 				notify.run();
 			} else {
 				throw new StatAlgoImporterServiceException(
@@ -726,19 +658,16 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 	public void repackageSoftware() throws StatAlgoImporterServiceException {
 		try {
 			HttpServletRequest httpRequest = this.getThreadLocalRequest();
-			ServiceCredentials serviceCredentials = SessionUtil
+			ServiceCredentials serviceCredentials = SessionUtil.getServiceCredentials(httpRequest);
-					.getServiceCredentials(httpRequest);
 			logger.debug("RepackageSoftware()");
 			Project project = SessionUtil.getProjectSession(httpRequest, serviceCredentials);
 			if (project != null) {
-				ProjectBuilder projectBuilder = new ProjectBuilder(project,
+				ProjectBuilder projectBuilder = new ProjectBuilder(project, serviceCredentials);
-						serviceCredentials);
 				project = projectBuilder.buildRepackage();
 				SessionUtil.setProjectSession(httpRequest, serviceCredentials, project);
 				ProjectArchiver.archive(project, serviceCredentials);
 			} else {
-				throw new StatAlgoImporterServiceException(
+				throw new StatAlgoImporterServiceException("The script was not packaged correctly!");
-						"The script was not packaged correctly!");
 			}
 
 			return;
@@ -753,6 +682,4 @@ public class StatAlgoImporterServiceImpl extends RemoteServiceServlet implements
 
 	}
 
-	
-
 }

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/server/blackbox/GeneralPurposeScriptProducer.java

@@ -0,0 +1,187 @@
+package org.gcube.portlets.user.statisticalalgorithmsimporter.server.blackbox;
+
+import java.io.BufferedReader;
+import java.io.InputStreamReader;
+import java.net.URL;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.nio.file.StandardOpenOption;
+import java.util.List;
+
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+/**
+ * 
+ * @author Giancarlo Panichi
+ *
+ *
+ */
+public class GeneralPurposeScriptProducer {
+	
+	private static final Logger logger = LoggerFactory.getLogger(GeneralPurposeScriptProducer.class);
+	public static final String REMOTE_TEMPLATE_FILE = "http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/RConfiguration/RD4SFunctions/SAITemplateForExternalInvocation.R";
+	public static final String PRE_INSTALLED = "Pre-Installed";
+
+	
+	// name,type,default
+	public class Triple {
+		String a;
+		String b;
+		String c;
+
+		public Triple(String a, String b, String c) {
+			this.a = a;
+			this.b = b;
+			this.c = c;
+		}
+	}
+
+	public String URLReader(String urlToTemplate) throws Exception {
+		URL remoteFile = new URL(urlToTemplate);
+		BufferedReader in = new BufferedReader(new InputStreamReader(remoteFile.openStream()));
+		StringBuffer sb = new StringBuffer();
+
+		String inputLine = null;
+
+		while ((inputLine = in.readLine()) != null)
+			sb.append(inputLine + System.lineSeparator());
+
+		in.close();
+
+		return sb.toString();
+	}
+
+	public Path generateScript(List<Triple> input, List<Triple> output, String mainSoftware, String softwareType)
+			throws Exception {
+		return generateScript(input, output, mainSoftware, softwareType, null);
+	}
+
+	public Path generateScript(List<Triple> input, List<Triple> output, String mainSoftware, String softwareType,
+			String URLtoSoftware) throws Exception {
+
+		String mainSoftwareName = mainSoftware;
+		if (softwareType.equals(PRE_INSTALLED)) {
+			mainSoftwareName = URLReader(URLtoSoftware);
+		}
+
+		String inputDeclaration = generateInputStrings(input, softwareType, mainSoftwareName);
+		String processInvocation = generateExternalProcessInvokation(mainSoftwareName, input);
+		String outputDeclaration = generateOutputStrings(output);
+		String fileExistenceChecks = generateFileExistenceCheck(output);
+		String script = URLReader(REMOTE_TEMPLATE_FILE);
+
+		script = script.replace("#INPUT_DECLARATION#", inputDeclaration);
+		script = script.replace("#PROCESS_COMPOSITION#", processInvocation);
+		script = script.replace("#OUTPUT_DECLARATION#", outputDeclaration);
+		script = script.replace("#CHECKS#", fileExistenceChecks);
+
+		// File outputFile = new File ("SAIExternalInvocationScript.R");
+		// FileWriter fw = new FileWriter(outputFile);
+		// fw.write(script);
+		// fw.close();
+
+		Path tempFile = Files.createTempFile("SAIExternalInvocationScript", ".R");
+
+		Files.write(tempFile, script.getBytes(), StandardOpenOption.WRITE);
+
+		logger.debug("Created output file: " + tempFile.toFile().getAbsolutePath());
+		return tempFile;
+	}
+
+	private String generateExternalProcessInvokation(String mainSoftware, List<Triple> input) {
+		StringBuffer sb = new StringBuffer();
+		sb.append("external_process_to_invoke<-'" + mainSoftware
+				+ "' #can be a python, fortran, linux-compiled, octave, java process" + System.lineSeparator());
+		sb.append("#prepare the command to invoke" + System.lineSeparator());
+		sb.append("command = paste(external_process_to_invoke");
+
+		for (Triple in : input) {
+			sb.append("," + in.a);
+		}
+
+		sb.append(",sep=\" \")" + System.lineSeparator());
+
+		sb.append("cat('Command:',command,'\\n')" + System.lineSeparator() + System.lineSeparator());
+
+		return sb.toString();
+	}
+
+	private String generateFileExistenceCheck(List<Triple> output) {
+		StringBuffer sb = new StringBuffer();
+		sb.append("#check if the output exists before exiting" + System.lineSeparator());
+
+		for (Triple o : output) {
+			sb.append("fexists = file.exists(paste(" + o.a + ",sep=''))" + System.lineSeparator());
+			sb.append("cat(\"file " + o.a + " exists?\",fexists,\"\\n\")" + System.lineSeparator());
+			sb.append("if (!fexists){" + System.lineSeparator());
+			sb.append("\tcat(fexists,\"Error, the output " + o.a + "(" + o.b + ")" + " does not exist!\\n\")"
+					+ System.lineSeparator());
+			sb.append("\tstoptheprocess" + System.lineSeparator());
+			sb.append("}" + System.lineSeparator() + System.lineSeparator());
+		}
+
+		return sb.toString();
+	}
+
+	private String generateInputStrings(List<Triple> input, String softwareType, String mainSoftware) {
+
+		StringBuffer sb = new StringBuffer();
+		sb.append(System.lineSeparator() + "#parameters of the process to invoke" + System.lineSeparator());
+		sb.append("false<-F" + System.lineSeparator());
+		sb.append("true<-T" + System.lineSeparator());
+		sb.append("softwaretype<-'" + softwareType + "'" + System.lineSeparator());
+		sb.append("softwareName<-'" + mainSoftware + "'" + System.lineSeparator());
+
+		String oinput = "overallInput<-'";
+		String oinputValues = "overallInputValues<-paste(";
+		String oinputTypes = "overallInputTypes<-'";
+
+		for (Triple in : input) {
+			String value = in.b;
+			if (in.c.equals("enumerated")) {
+				value = in.b.substring(0, in.b.indexOf("|"));
+				sb.append(in.a + "<-\"" + value + "\"" + System.lineSeparator());
+			} else
+				sb.append(in.a + "<-\"" + in.b + "\"" + System.lineSeparator());
+
+			oinput += in.a + "\t";
+			oinputValues += in.a + ",";
+			oinputTypes += in.c + "\t";
+
+			sb.append("cat('Input Parameter:" + in.a + "'," + in.a + ",'\\n'" + ")" + System.lineSeparator());
+		}
+
+		sb.append(oinput.trim() + "'" + System.lineSeparator());
+		sb.append(oinputValues.substring(0, oinputValues.length() - 1) + ",sep='\t')" + System.lineSeparator());
+		sb.append(oinputTypes.trim() + "'" + System.lineSeparator());
+
+		return sb.toString() + System.lineSeparator();
+	}
+
+	private String generateOutputStrings(List<Triple> output) {
+
+		StringBuffer sb = new StringBuffer();
+
+		sb.append(System.lineSeparator() + "#prepare the final output file" + System.lineSeparator());
+		sb.append(
+				"outputfolder <- getwd() #current working folder (a temporary folder is created at each run and set as working directory)"
+						+ System.lineSeparator());
+
+		for (Triple o : output) {
+			sb.append(o.a + "<-\"" + o.b + "\"" + System.lineSeparator());
+			sb.append("#fixed code to add some randomness to the output file name and save concurrent requests"
+					+ System.lineSeparator());
+			sb.append(o.a + "<-paste(" + o.a + ",'_',Sys.time(),sep='')" + System.lineSeparator());
+			sb.append(o.a + "<-gsub(' ', '_', " + o.a + ")" + System.lineSeparator());
+			sb.append(o.a + "<-gsub(':', '_', " + o.a + ")" + System.lineSeparator());
+			sb.append("file.rename('" + o.b + "'," + o.a + ")" + System.lineSeparator());
+
+			sb.append("cat('Output Parameter:" + o.a + "'," + o.a + ",'\\n'" + ")" + System.lineSeparator());
+
+		}
+
+		return sb.toString() + System.lineSeparator();
+	}
+
+}

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/server/blackbox/MainGenerator.java

@@ -0,0 +1,144 @@
+package org.gcube.portlets.user.statisticalalgorithmsimporter.server.blackbox;
+
+import java.io.IOException;
+import java.nio.file.Files;
+import java.nio.file.Path;
+import java.nio.file.StandardOpenOption;
+import java.util.ArrayList;
+import java.util.Arrays;
+import java.util.List;
+
+import org.gcube.common.homelibrary.home.exceptions.InternalErrorException;
+import org.gcube.common.homelibrary.home.workspace.WorkspaceItem;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.server.storage.FilesStorage;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.server.util.ServiceCredentials;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.exception.StatAlgoImporterServiceException;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.input.InputOutputVariables;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.Project;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.project.ProjectSupportBlackBox;
+import org.gcube.portlets.user.statisticalalgorithmsimporter.shared.workspace.ItemDescription;
+import org.slf4j.Logger;
+import org.slf4j.LoggerFactory;
+
+/**
+ * 
+ * @author Giancarlo Panichi
+ *
+ *
+ */
+public class MainGenerator {
+
+	private static final Logger logger = LoggerFactory.getLogger(MainGenerator.class);
+	private static final String R_MIMETYPE = "text/plain";
+	private static final String R_DESCRIPTION="R script for ";
+	
+	public void createMain(ServiceCredentials serviceCredentials,Project project) throws StatAlgoImporterServiceException {
+
+		logger.debug("Project: " + project);
+		if (project == null || project.getProjectConfig() == null
+				|| project.getProjectConfig().getProjectSupport() == null) {
+			String error = "Error invalid project support!";
+			logger.error(error);
+			throw new StatAlgoImporterServiceException(error);
+		}
+
+		ProjectSupportBlackBox projectSupportBlackBox;
+		if (!(project.getProjectConfig().getProjectSupport() instanceof ProjectSupportBlackBox)) {
+			String error = "Error invalid project support!";
+			logger.error(error);
+			throw new StatAlgoImporterServiceException(error);
+		} else {
+			projectSupportBlackBox = (ProjectSupportBlackBox) project.getProjectConfig().getProjectSupport();
+		}
+		try {
+
+			logger.debug("Language: " + project.getProjectConfig().getLanguage());
+			logger.debug("Binary software: " + projectSupportBlackBox.getBinaryItem());
+
+			GeneralPurposeScriptProducer s = new GeneralPurposeScriptProducer();
+
+			List<GeneralPurposeScriptProducer.Triple> input = new ArrayList<>();
+			List<GeneralPurposeScriptProducer.Triple> output = new ArrayList<>();
+
+			for (InputOutputVariables ioV : project.getInputData().getListInputOutputVariables()) {
+				switch (ioV.getIoType()) {
+				case INPUT:
+					input.add(s.new Triple(ioV.getName(), ioV.getDefaultValue(), ioV.getDataType().getId()));
+					break;
+				case OUTPUT:
+					output.add(s.new Triple(ioV.getName(), ioV.getDefaultValue(), ioV.getDataType().getId()));
+					break;
+				default:
+					break;
+
+				}
+			}
+
+			logger.debug("Inputs: " + Arrays.toString(input.toArray()));
+			logger.debug("Outputs: " + Arrays.toString(output.toArray()));
+
+			Path producedScript = null;
+
+			if (project.getProjectConfig().getLanguage().compareTo(GeneralPurposeScriptProducer.PRE_INSTALLED) == 0) {
+				producedScript = s.generateScript(input, output, projectSupportBlackBox.getBinaryItem().getName(),
+						project.getProjectConfig().getLanguage(),
+						projectSupportBlackBox.getBinaryItem().getPublicLink());
+			} else {
+				producedScript = s.generateScript(input, output, projectSupportBlackBox.getBinaryItem().getName(),
+						project.getProjectConfig().getLanguage());
+			}
+			
+			if (producedScript == null || !Files.exists(producedScript)) {
+				String error = "Error creating script: file not exists!";
+				logger.error(error);
+				throw new StatAlgoImporterServiceException(error);
+			}
+			
+			
+			//////
+			FilesStorage filesStorage = new FilesStorage();
+			WorkspaceItem mainItem;
+
+			try {
+				mainItem = filesStorage.createItemOnWorkspace(
+						serviceCredentials.getUserName(),
+						Files.newInputStream(producedScript, StandardOpenOption.READ),
+						
+						producedScript.getFileName().toString(), R_DESCRIPTION+project.getProjectConfig().getLanguage(),
+						R_MIMETYPE, project.getProjectFolder().getFolder().getId());
+			} catch (IOException e) {
+				logger.error(e.getLocalizedMessage());
+				e.printStackTrace();
+				throw new StatAlgoImporterServiceException(e.getLocalizedMessage(),
+						e);
+			}
+
+			ItemDescription mainItemDescription;
+			try {
+				mainItemDescription = new ItemDescription(mainItem.getId(),
+						mainItem.getName(), mainItem.getOwner().getPortalLogin(),
+						mainItem.getPath(), mainItem.getType().name());
+				mainItemDescription.setPublicLink(mainItem
+						.getPublicLink(false));
+			} catch (InternalErrorException e) {
+				logger.error(e.getLocalizedMessage());
+				e.printStackTrace();
+				throw new StatAlgoImporterServiceException(e.getLocalizedMessage());
+
+			}
+
+			project.getMainCode().setItemDescription(mainItemDescription);
+			logger.debug("MainCode: "
+					+ project.getMainCode().getItemDescription());
+			
+
+		} catch (StatAlgoImporterServiceException e) {
+			throw e;
+		} catch (Throwable e) {
+			logger.error("Error gerating main code: " + e.getLocalizedMessage(), e);
+			throw new StatAlgoImporterServiceException("Error gerating main code: " + e.getLocalizedMessage(), e);
+		}
+
+	}
+
+}

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/server/generator/ProjectBuilder.java

@@ -86,6 +86,7 @@ public class ProjectBuilder {
 	public Project buildTarget() throws StatAlgoImporterServiceException {
 		checkInfoForBuild();
 		createBackup();
+		createMainCodeIfRequest();
 		createTargetFolder();
 		createDeployFolder();
 		createProjectPackage();
@@ -128,6 +129,10 @@ public class ProjectBuilder {
 		createBackupOfPackageProject();
 	}
 	
+	private void createMainCodeIfRequest() throws StatAlgoImporterServiceException {
+		//TODO
+	}
+
 	private void repackageProjectPackage()
 			throws StatAlgoImporterServiceException {
 		List<String> idsToExclude = new ArrayList<String>();

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/server/is/BuildSAIDescriptor.java

@@ -31,21 +31,17 @@ public class BuildSAIDescriptor {
 			availableProjectConfigurations.add(rBlackBox);
 			ProjectSetup java = new ProjectSetup("Java", ProjectSupportType.BlackBox);
 			availableProjectConfigurations.add(java);
-			ProjectSetup knimeWorkflow = new ProjectSetup("Knime Workflow",
+			ProjectSetup knimeWorkflow = new ProjectSetup("Knime Workflow", ProjectSupportType.BlackBox);
-					ProjectSupportType.BlackBox);
 			availableProjectConfigurations.add(knimeWorkflow);
-			ProjectSetup linuxCompiled = new ProjectSetup("Linux-compiled",
+			ProjectSetup linuxCompiled = new ProjectSetup("Linux-compiled", ProjectSupportType.BlackBox);
-					ProjectSupportType.BlackBox);
 			availableProjectConfigurations.add(linuxCompiled);
 			ProjectSetup octave = new ProjectSetup("Octave", ProjectSupportType.BlackBox);
 			availableProjectConfigurations.add(octave);
 			ProjectSetup python = new ProjectSetup("Python", ProjectSupportType.BlackBox);
 			availableProjectConfigurations.add(python);
-			ProjectSetup windowsCompiled = new ProjectSetup("Windows-compiled",
+			ProjectSetup windowsCompiled = new ProjectSetup("Windows-compiled", ProjectSupportType.BlackBox);
-					ProjectSupportType.BlackBox);
 			availableProjectConfigurations.add(windowsCompiled);
-			ProjectSetup preInstalled = new ProjectSetup("Pre-Installed",
+			ProjectSetup preInstalled = new ProjectSetup("Pre-Installed", ProjectSupportType.BlackBox);
-					ProjectSupportType.BlackBox);
 			availableProjectConfigurations.add(preInstalled);
 			saiDescriptor = new SAIDescriptor(availableProjectConfigurations);
 		} else {
@@ -74,28 +70,28 @@ public class BuildSAIDescriptor {
 				}
 			} else {
 				logger.info("SAIDescriptorJAXB use default configuration for scope: " + scope);
+
 				ProjectSetup r = new ProjectSetup("R", ProjectSupportType.REdit);
 				availableProjectConfigurations.add(r);
 				ProjectSetup rBlackBox = new ProjectSetup("R-black box", ProjectSupportType.BlackBox);
 				availableProjectConfigurations.add(rBlackBox);
 				ProjectSetup java = new ProjectSetup("Java", ProjectSupportType.BlackBox);
 				availableProjectConfigurations.add(java);
-				ProjectSetup knimeWorkflow = new ProjectSetup("Knime Workflow",
+				ProjectSetup knimeWorkflow = new ProjectSetup("Knime Workflow", ProjectSupportType.BlackBox);
-						ProjectSupportType.BlackBox);
 				availableProjectConfigurations.add(knimeWorkflow);
-				ProjectSetup linuxCompiled = new ProjectSetup("Linux-compiled",
+				ProjectSetup linuxCompiled = new ProjectSetup("Linux-compiled", ProjectSupportType.BlackBox);
-						ProjectSupportType.BlackBox);
 				availableProjectConfigurations.add(linuxCompiled);
 				ProjectSetup octave = new ProjectSetup("Octave", ProjectSupportType.BlackBox);
 				availableProjectConfigurations.add(octave);
 				ProjectSetup python = new ProjectSetup("Python", ProjectSupportType.BlackBox);
 				availableProjectConfigurations.add(python);
-				ProjectSetup windowsCompiled = new ProjectSetup("Windows-compiled",
+				ProjectSetup windowsCompiled = new ProjectSetup("Windows-compiled", ProjectSupportType.BlackBox);
-						ProjectSupportType.BlackBox);
 				availableProjectConfigurations.add(windowsCompiled);
 
 			}
+
 			saiDescriptor = new SAIDescriptor(availableProjectConfigurations);
+
 		}
 
 		logger.debug("SAIDescriptor: " + saiDescriptor);

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/shared/Constants.java

@@ -35,6 +35,9 @@ public class Constants {
 	public static final String SAI_NAME = "SAIProfile";
 	public static final String SAI_CATEGORY = "SAI";
 
+	// Main Generator
+	public static final String PRE_INSTALLED = "Pre-Installed";
+	public static final String REMOTE_TEMPLATE_FILE = "http://svn.research-infrastructures.eu/public/d4science/gcube/trunk/data-analysis/RConfiguration/RD4SFunctions/SAITemplateForExternalInvocation.R";
 	
 
 }

src/main/java/org/gcube/portlets/user/statisticalalgorithmsimporter/shared/descriptor/SAIDescriptor.java

@@ -21,6 +21,7 @@ public class SAIDescriptor implements Serializable {
 	public SAIDescriptor(ArrayList<ProjectSetup> availableProjectConfigurations) {
 		super();
 		this.availableProjectConfigurations = availableProjectConfigurations;
+
 	}
 
 	public ArrayList<ProjectSetup> getAvailableProjectConfigurations() {

src/main/resources/org/gcube/portlets/user/statisticalalgorithmsimporter/statalgoimporter.gwt.xml

@@ -56,19 +56,19 @@
 		name="locale" values="es" /> <set-property name="locale" value="en, it, es" 
 		/> <set-property-fallback name="locale" value="en" /> -->
 
-
+	<!-- 
 	<set-property name="log_ConsoleLogger" value="ENABLED" /> <set-property 
 		name="log_DivLogger" value="ENABLED" /> <set-property name="log_GWTLogger" 
 		value="ENABLED" /> <set-property name="log_SystemLogger" value="ENABLED" 
-		/> 
+		/>  --> 
 	<!-- Not in GWT 2.6 <set-property name="log_FirebugLogger" value="ENABLED" 
 		/> -->
 
-	<!-- 
+ 
 	<set-property name="log_ConsoleLogger" value="DISABLED" />
 	<set-property name="log_DivLogger" value="DISABLED" />
 	<set-property name="log_GWTLogger" value="DISABLED" />
-	<set-property name="log_SystemLogger" value="DISABLED" />  -->
+	<set-property name="log_SystemLogger" value="DISABLED" />
 	<!-- Not in GWT 2.6 <set-property name="log_FirebugLogger" value="DISABLED" 
 		/> -->