package org.gcube.dataanalysis.seadatanet; import java.io.BufferedInputStream; import java.io.BufferedReader; import java.io.DataOutputStream; import java.io.File; import java.io.FileNotFoundException; import java.io.FileOutputStream; import java.io.FileReader; import java.io.IOException; import java.io.InputStream; import java.io.InputStreamReader; import java.io.StringReader; import java.net.HttpURLConnection; import java.net.URL; import java.net.URLConnection; import javax.xml.parsers.DocumentBuilder; import javax.xml.parsers.DocumentBuilderFactory; import javax.xml.parsers.ParserConfigurationException; import org.gcube.contentmanagement.lexicalmatcher.utils.AnalysisLogger; import org.gcube.dataanalysis.ecoengine.configuration.AlgorithmConfiguration; import org.w3c.dom.Document; import org.w3c.dom.Node; import org.xml.sax.InputSource; import org.xml.sax.SAXException; public class DivaHTTPClient { public static String WEB_HTTP="http://gher-diva.phys.ulg.ac.be/web-vis/Python/web"; public static String DOWN_FILE_NC="/download?fieldname="; public static String postFile(File file) throws Exception { String crlf = "\r\n"; String twoHyphens = "--"; String boundary = "*****"; HttpURLConnection httpUrlConnection = null; try { URL url = new URL(WEB_HTTP+"/upload"); httpUrlConnection = (HttpURLConnection) url.openConnection(); httpUrlConnection.setUseCaches(false); httpUrlConnection.setDoOutput(true); httpUrlConnection.setRequestMethod("POST"); httpUrlConnection.setRequestProperty("Connection", "Keep-Alive"); httpUrlConnection.setRequestProperty("Cache-Control", "no-cache"); httpUrlConnection.setRequestProperty( "Content-Type", "multipart/form-data;boundary=" + boundary); DataOutputStream request = new DataOutputStream( httpUrlConnection.getOutputStream()); request.writeBytes("--" + boundary + crlf); request.writeBytes("Content-Disposition: form-data; name=\"data" + "\";filename=\"" + file.getName() + "\"" + crlf); request.writeBytes(crlf); BufferedReader reader = new BufferedReader(new FileReader(file)); String lineString = reader.readLine(); while (lineString!=null) { request.writeBytes(lineString+"\n"); lineString = reader.readLine(); } reader.close(); request.writeBytes(crlf); request.writeBytes(twoHyphens + boundary + twoHyphens + crlf); request.flush(); request.close(); InputStream responseStream = new BufferedInputStream(httpUrlConnection.getInputStream()); BufferedReader responseStreamReader = new BufferedReader(new InputStreamReader(responseStream)); String line = ""; StringBuilder stringBuilder = new StringBuilder(); while ((line = responseStreamReader.readLine()) != null) { stringBuilder.append(line).append("\n"); } responseStreamReader.close(); String response = stringBuilder.toString(); responseStream.close(); httpUrlConnection.disconnect(); return response; } catch (IOException e) { throw new Exception(e); } finally { if (httpUrlConnection != null) httpUrlConnection.disconnect(); } } /** * sessionid id from previous upload len correlation length (arc degrees) stn signal to noise ratio (non-dimensional) x0,x1,dx first and last longitude values and resolution of the grid y0,y1,dy idem for latitude level depth level */ public static DivaAnalysisGetResponse getAnalysis (String id,double len,double stn,double x0,double x1, double dx,double y0,double y1,double dy,double level) throws Exception { HttpURLConnection httpUrlConnection = null; try { String get_url=WEB_HTTP+"/make_analysis?"; get_url+="sessionid="+id+"&"; get_url+="len="+len+"&"; get_url+="stn="+stn+"&"; get_url+="x0="+x0+"&"; get_url+="x1="+x1+"&"; get_url+="dx="+dx+"&"; get_url+="y0="+y0+"&"; get_url+="y1="+y1+"&"; get_url+="dy="+dy+"&"; get_url+="level="+level+""; //System.out.println("GET URL="+get_url); URL url = new URL(get_url); httpUrlConnection = (HttpURLConnection) url.openConnection(); httpUrlConnection.setUseCaches(false); httpUrlConnection.setDoOutput(true); httpUrlConnection.setRequestMethod("GET"); httpUrlConnection.setRequestProperty("Connection", "Keep-Alive"); httpUrlConnection.setRequestProperty("Cache-Control", "no-cache"); InputStream responseStream = new BufferedInputStream(httpUrlConnection.getInputStream()); BufferedReader responseStreamReader = new BufferedReader(new InputStreamReader(responseStream)); String line = ""; StringBuilder stringBuilder = new StringBuilder(); while ((line = responseStreamReader.readLine()) != null) { stringBuilder.append(line).append("\n"); } responseStreamReader.close(); String response = stringBuilder.toString(); //System.out.println("RESPONSE STRING: "+response); AnalysisLogger.getLogger().debug("Response from DIVA Analysis: \n"+response); Document doc = loadXMLFromString(response); Node idNode = doc.getElementsByTagName("result").item(0); String identifier = idNode.getAttributes().item(0).getNodeValue(); Double vmin = Double.parseDouble(doc.getElementsByTagName("stat").item(0).getTextContent()); Double vmax = Double.parseDouble(doc.getElementsByTagName("stat").item(1).getTextContent()); Double stat_obs_count_used = Double.parseDouble(doc.getElementsByTagName("stat").item(2).getTextContent()); Double stat_posteriori_stn = Double.parseDouble(doc.getElementsByTagName("stat").item(3).getTextContent()); responseStream.close(); httpUrlConnection.disconnect(); return new DivaAnalysisGetResponse(identifier, vmin, vmax, stat_obs_count_used, stat_posteriori_stn); } catch (IOException e) { throw new Exception(e); } finally { if (httpUrlConnection != null) httpUrlConnection.disconnect(); } } public static DivaFilePostResponse uploadFile(File file) throws Exception, IOException, ParserConfigurationException, SAXException { String result_xml = null; try { result_xml = postFile(file); } catch (Exception e) { e.printStackTrace(); } if (result_xml == null) { throw new SAXException("Error in HTTP response no response element found!"); } //Create Document object by XMLResponse Document doc = loadXMLFromString(result_xml); //Print XML Response AnalysisLogger.getLogger().debug("DIVA XML Response: \n"+result_xml); Node root = doc.getDocumentElement(); if(root== null) throw new SAXException("Error in HTTP response no root element found!"); Integer obs_count= null; try{ obs_count=Integer.parseInt(root.getChildNodes().item(1).getTextContent()); }catch(NullPointerException pe ){ throw new Exception("Error in uploading file to DIVA!"); } Double obs_x0=Double.parseDouble(root.getChildNodes().item(3).getTextContent()); Double obs_x1=Double.parseDouble(root.getChildNodes().item(5).getTextContent()); Double obs_y0=Double.parseDouble(root.getChildNodes().item(7).getTextContent()); Double obs_y1=Double.parseDouble(root.getChildNodes().item(9).getTextContent()); Double obs_v0=Double.parseDouble(root.getChildNodes().item(11).getTextContent()); Double obs_v1=Double.parseDouble(root.getChildNodes().item(13).getTextContent()); String sessionid=root.getChildNodes().item(15).getTextContent(); return new DivaFilePostResponse(obs_x0, obs_x1, obs_y0, obs_y1, obs_v0, obs_v1, obs_count, sessionid); } public static void downloadFileDiva(String fileid, String destinationFile) throws Exception{ try { String fileurl = DivaHTTPClient.WEB_HTTP + DivaHTTPClient.DOWN_FILE_NC + fileid; URL smpFile = new URL(fileurl); URLConnection uc = (URLConnection) smpFile.openConnection(); InputStream is = uc.getInputStream(); AnalysisLogger.getLogger().debug("Retrieving DIVA file from " + fileurl + " to :" + destinationFile); inputStreamToFile(is, destinationFile); is.close(); } catch (Exception e) { throw e; } } public static void inputStreamToFile(InputStream is, String path) throws FileNotFoundException, IOException { FileOutputStream out = new FileOutputStream(new File(path)); byte buf[] = new byte[1024]; int len = 0; while ((len = is.read(buf)) > 0) out.write(buf, 0, len); out.close(); } public static void main(String[] args) throws Exception { AnalysisLogger.setLogger("cfg/"+AlgorithmConfiguration.defaultLoggerFile); DivaFilePostResponse response=uploadFile(new File("resources"+File.separator+"files"+File.separator+"temperature_argo.txt")); //System.out.println(getAnalysis(response.getSessionid(),5,4,76,78,1,35,78,1,2)); System.out.println(""+response); DivaAnalysisGetResponse respAnalysis = getAnalysis(response.getSessionid(),10, 0.8, -180, 180, 3, -80, 80, 3, 1); System.out.println("Response: "+respAnalysis.toString()); //Downloader downFileNC = new Downloader(); //System.out.println(System.getProperty("user.dir")+File.separator+"temp.nc"); File f=new File(System.getProperty("user.dir")+File.separator+"temp.nc"); if(!f.exists()) f.createNewFile(); downloadFileDiva(WEB_HTTP+DOWN_FILE_NC+ respAnalysis.getIdentifier(),System.getProperty("user.dir")+File.separator+"temp.nc"); } //PARSER XML private static Document loadXMLFromString(String xml) throws ParserConfigurationException, SAXException, IOException { DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance(); DocumentBuilder builder = factory.newDocumentBuilder(); InputSource is = new InputSource(new StringReader(xml)); return builder.parse(is); } }