package org.gcube.informationsystem.resourceregistry.er.entity; import java.util.HashMap; import java.util.Map; import java.util.UUID; import org.codehaus.jettison.json.JSONArray; import org.codehaus.jettison.json.JSONObject; import org.gcube.informationsystem.model.AccessType; import org.gcube.informationsystem.model.embedded.Header; import org.gcube.informationsystem.model.entity.Entity; import org.gcube.informationsystem.model.entity.Facet; import org.gcube.informationsystem.model.entity.Resource; import org.gcube.informationsystem.model.relation.ConsistsOf; import org.gcube.informationsystem.model.relation.Relation; import org.gcube.informationsystem.resourceregistry.api.exceptions.AvailableInAnotherContextException; import org.gcube.informationsystem.resourceregistry.api.exceptions.NotFoundException; import org.gcube.informationsystem.resourceregistry.api.exceptions.ResourceRegistryException; import org.gcube.informationsystem.resourceregistry.api.exceptions.context.ContextException; import org.gcube.informationsystem.resourceregistry.api.exceptions.entity.EntityAlreadyPresentException; import org.gcube.informationsystem.resourceregistry.api.exceptions.query.InvalidQueryException; import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext; import org.gcube.informationsystem.resourceregistry.context.security.SecurityContext.PermissionMode; import org.gcube.informationsystem.resourceregistry.er.ERManagement; import org.gcube.informationsystem.resourceregistry.er.ERManagementUtility; import org.gcube.informationsystem.resourceregistry.er.relation.RelationManagement; import org.gcube.informationsystem.resourceregistry.utils.Utility; import com.orientechnologies.orient.core.sql.query.OSQLSynchQuery; import com.tinkerpop.blueprints.Direction; import com.tinkerpop.blueprints.Edge; import com.tinkerpop.blueprints.Element; import com.tinkerpop.blueprints.Vertex; import com.tinkerpop.blueprints.impls.orient.OrientEdge; import com.tinkerpop.blueprints.impls.orient.OrientElement; import com.tinkerpop.blueprints.impls.orient.OrientGraph; import com.tinkerpop.blueprints.impls.orient.OrientVertex; import com.tinkerpop.blueprints.impls.orient.OrientVertexType; /** * @author Luca Frosini (ISTI - CNR) */ public abstract class EntityManagement extends ERManagement { /** * Provide a cache edge-internal-id -> RelationManagement * this avoid to recreate the relationManagement of already visited edges */ @SuppressWarnings("rawtypes") protected Map relationManagements; protected EntityManagement(AccessType accessType) { super(accessType); this.ignoreKeys.add(Entity.HEADER_PROPERTY); this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_IN_PREFIX.toLowerCase()); this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_OUT_PREFIX.toLowerCase()); this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_IN_PREFIX.toUpperCase()); this.ignoreStartWithKeys.add(OrientVertex.CONNECTION_OUT_PREFIX.toUpperCase()); this.relationManagements = new HashMap<>(); } protected EntityManagement(AccessType accessType, SecurityContext workingContext, OrientGraph orientGraph) { this(accessType); this.orientGraph = orientGraph; setWorkingContext(workingContext); } @SuppressWarnings("rawtypes") /* * It works perfectly in case of any kind of update. In case of use from create * the cache does not work by using the ID because until commit the edge has a * fake id starting with - (minus) sign. This not imply any collateral effect * but a better solution is a desiderata. */ protected RelationManagement getRelationManagement(Edge edge) throws ResourceRegistryException { String id = edge.getId().toString(); RelationManagement relationManagement = relationManagements.get(id); if(relationManagement == null) { relationManagement = ERManagementUtility.getRelationManagement(getWorkingContext(), orientGraph, edge); relationManagements.put(id, relationManagement); } return relationManagement; } protected void addToRelationManagement(@SuppressWarnings("rawtypes") RelationManagement relationManagement) throws ResourceRegistryException { Element elem = relationManagement.getElement(); String id = elem.getId().toString(); if(relationManagements.get(id) != null && relationManagements.get(id) != relationManagement) { StringBuilder errorMessage = new StringBuilder(); errorMessage.append("Two different instance of "); errorMessage.append(relationManagement.getClass().getSimpleName()); errorMessage.append(" point to the same "); errorMessage.append(elem.getClass().getSimpleName()); errorMessage.append(". "); errorMessage.append(Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE); throw new ResourceRegistryException(errorMessage.toString()); } relationManagements.put(id, relationManagement); } protected static JSONObject addRelation(JSONObject sourceResource, JSONObject relation, String arrayKey) throws ResourceRegistryException { JSONArray relationArray = null; try { if(sourceResource.has(arrayKey)) { relationArray = sourceResource.getJSONArray(arrayKey); } else { relationArray = new JSONArray(); } relationArray.put(relation); sourceResource.putOpt(arrayKey, relationArray); } catch(Exception e) { throw new ResourceRegistryException(e); } return sourceResource; } protected Vertex createVertex() throws EntityAlreadyPresentException, ResourceRegistryException { logger.trace("Going to create {} for {} ({}) using {}", Vertex.class.getSimpleName(), accessType.getName(), erType, jsonNode); try { if(oClass.isAbstract()) { String error = String.format( "Trying to create an instance of %s of type %s which is abstract. The operation will be aborted.", accessType.getName(), erType); throw new ResourceRegistryException(error); } Vertex vertexEntity = orientGraph.addVertex("class:" + erType); try { if(uuid != null) { Vertex v = getElement(); if(v != null) { String error = String.format("A %s with UUID %s already exist", erType, uuid.toString()); throw getSpecificERAlreadyPresentException(error); } } } catch(NotFoundException e) { try { Element el = ERManagementUtility.getAnyElementByUUID(uuid); String error = String.format("UUID %s is already used by another %s. This is not allowed.", uuid.toString(), (el instanceof Vertex) ? Entity.NAME : Relation.NAME); throw getSpecificERAvailableInAnotherContextException(error); } catch(NotFoundException e1) { // OK the UUID is not already used. } } catch(AvailableInAnotherContextException e) { throw e; } this.element = vertexEntity; if(accessType == AccessType.RESOURCE) { // Facet and relation are created in calling method } else { ERManagement.updateProperties(oClass, element, jsonNode, ignoreKeys, ignoreStartWithKeys); } logger.info("Created {} is {}", Vertex.class.getSimpleName(), Utility.toJsonString((OrientVertex) element, true)); return element; } catch(ResourceRegistryException e) { throw e; } catch(Exception e) { logger.trace("Error while creating {} for {} ({}) using {}", Vertex.class.getSimpleName(), accessType.getName(), erType, jsonNode, e); throw new ResourceRegistryException("Error Creating " + erType + " with " + jsonNode, e.getCause()); } } @Override protected boolean reallyAddToContext(SecurityContext targetSecurityContext) throws ContextException, ResourceRegistryException { targetSecurityContext.addElement(getElement(), orientGraph); Iterable edges = getElement().getEdges(Direction.OUT); for(Edge edge : edges) { @SuppressWarnings("rawtypes") RelationManagement relationManagement = getRelationManagement(edge); relationManagement.internalAddToContext(targetSecurityContext); } return true; } @Override protected boolean reallyRemoveFromContext(SecurityContext targetSecurityContext) throws ContextException, ResourceRegistryException { Iterable edges = getElement().getEdges(Direction.OUT); for(Edge edge : edges) { @SuppressWarnings("rawtypes") RelationManagement relationManagement = getRelationManagement(edge); relationManagement.internalRemoveFromContext(targetSecurityContext); } targetSecurityContext.removeElement(getElement(), orientGraph); return true; } @Override public String reallyGetAll(boolean polymorphic) throws ResourceRegistryException { JSONArray jsonArray = new JSONArray(); Iterable iterable = orientGraph.getVerticesOfClass(erType, polymorphic); for(Vertex vertex : iterable) { @SuppressWarnings("rawtypes") EntityManagement entityManagement = ERManagementUtility.getEntityManagement(getWorkingContext(), orientGraph, vertex); try { JSONObject jsonObject = entityManagement.serializeAsJson(); jsonArray.put(jsonObject); } catch(ResourceRegistryException e) { logger.error("Unable to correctly serialize {}. It will be excluded from results. {}", vertex.toString(), Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE); } } return jsonArray.toString(); } public String reallyQuery(String relationType, String referenceType, Direction direction, boolean polymorphic, Map constraint) throws ResourceRegistryException { JSONArray jsonArray = new JSONArray(); // TODO check types /* * SELECT FROM (TRAVERSE inE('isIdentifiedBy'), outV('EService') FROM (SELECT * FROM SoftwareFacet WHERE group='VREManagement' AND name='SmartExecutor')) * * WHERE @class='EService' // Only is not polymorphic */ boolean first = true; StringBuilder selectStringBuilder = new StringBuilder("SELECT FROM (TRAVERSE "); selectStringBuilder.append(direction.name().toLowerCase()); selectStringBuilder.append("E('"); selectStringBuilder.append(relationType); selectStringBuilder.append("'), "); selectStringBuilder.append(direction.opposite().name().toLowerCase()); selectStringBuilder.append("V('"); selectStringBuilder.append(erType); selectStringBuilder.append("') FROM (SELECT FROM "); selectStringBuilder.append(referenceType); for(String key : constraint.keySet()) { if(first) { selectStringBuilder.append(" WHERE "); first = false; } else { selectStringBuilder.append(" AND "); } selectStringBuilder.append(key); selectStringBuilder.append("="); String value = constraint.get(key).trim(); selectStringBuilder.append("'"); selectStringBuilder.append(value); selectStringBuilder.append("'"); } selectStringBuilder.append(" ))"); if(!polymorphic) { selectStringBuilder.append(" WHERE @class='"); selectStringBuilder.append(erType); selectStringBuilder.append("'"); } String select = selectStringBuilder.toString(); logger.trace(select); OSQLSynchQuery osqlSynchQuery = new OSQLSynchQuery(select); Iterable elements = orientGraph.command(osqlSynchQuery).execute(); for(Element element : elements) { if(polymorphic) { OrientVertexType orientVertexType = null; try { OrientElement orientElement = ((OrientElement) element); if(orientElement instanceof OrientEdge) { continue; } orientVertexType = ((OrientVertex) orientElement).getType(); } catch(Exception e) { String error = String.format("Unable to detect type of %s. %s", element.toString(), Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE); logger.error(error, e); throw new ResourceRegistryException(error); } if(orientVertexType.getName().compareTo(erType) != 0) { if(!orientVertexType.isSubClassOf(erType)) { continue; } } } Vertex vertex = (Vertex) element; @SuppressWarnings("rawtypes") EntityManagement entityManagement = ERManagementUtility.getEntityManagement(getWorkingContext(), orientGraph, vertex); try { JSONObject jsonObject = entityManagement.serializeAsJson(); jsonArray.put(jsonObject); } catch(ResourceRegistryException e) { logger.error("Unable to correctly serialize {}. It will be excluded from results. {}", vertex.toString(), Utility.SHOULD_NOT_OCCUR_ERROR_MESSAGE); } } return jsonArray.toString(); } public String query(String relationType, String referenceType, UUID referenceUUID, Direction direction, boolean polymorphic, Map constraint) throws ResourceRegistryException { try { orientGraph = getWorkingContext().getGraph(PermissionMode.READER); AccessType relationAccessType = ERManagementUtility.getBaseAccessType(relationType); if(relationAccessType != AccessType.IS_RELATED_TO || relationAccessType != AccessType.CONSISTS_OF) { String error = String.format("%s must be a relation type", relationType); throw new ResourceRegistryException(error); } AccessType referenceAccessType = ERManagementUtility.getBaseAccessType(referenceType); if(referenceAccessType != AccessType.RESOURCE || relationAccessType != AccessType.FACET) { String error = String.format("%s must be a en entity type", referenceType); throw new ResourceRegistryException(error); } if(constraint==null) { constraint = new HashMap<>(); } switch(accessType) { case RESOURCE: if(relationAccessType == AccessType.CONSISTS_OF) { if(direction != Direction.OUT) { String error = String.format("%s can only goes %s from %s.", relationType, Direction.OUT.name(), erType); throw new InvalidQueryException(error); } else { if(referenceAccessType != AccessType.FACET) { String error = String.format("%s can only has as target a %s. Provided instead %s : %s", relationType, Facet.NAME, referenceAccessType, referenceType); throw new InvalidQueryException(error); } } } break; case FACET: if(relationAccessType != AccessType.CONSISTS_OF || direction != Direction.IN || referenceAccessType != AccessType.RESOURCE) { String error = String.format("%s can only has %s %s from a %s.", erType, Direction.IN.name(), ConsistsOf.NAME, Resource.NAME); throw new InvalidQueryException(error); } break; default: break; } if(referenceUUID!=null) { constraint.put(Entity.HEADER_PROPERTY + "." + Header.UUID_PROPERTY, referenceUUID.toString()); } return reallyQuery(relationType, referenceType, direction, polymorphic, constraint); } catch(ResourceRegistryException e) { throw e; } catch(Exception e) { throw new ResourceRegistryException(e); } finally { if(orientGraph != null) { orientGraph.shutdown(); } } } }